RNA–Protein interactions for RNA: ENST00000589758.1

MBD1-220, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best)

Gene MBD1, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-220ENST00000589758 PSMB7Q99436 277 aa14.71□□□□□ -0.05
MBD1-220ENST00000589758 GANQ9H2C0 597 aa14.71□□□□□ -0.05
MBD1-220ENST00000589758 VPS51Q9UID3 782 aa14.71□□□□□ -0.05
MBD1-220ENST00000589758 SNX10Q9Y5X0 201 aa14.71□□□□□ -0.05
MBD1-220ENST00000589758 ILVBLA1L0T0 632 aa14.7□□□□□ -0.06
MBD1-220ENST00000589758 SRRM3A6NNA2 597 aaPredicted RBP14.7□□□□□ -0.06
MBD1-220ENST00000589758 LGALS16A8MUM7 142 aa14.7□□□□□ -0.06
MBD1-220ENST00000589758 BNIP3LO60238 219 aa14.7□□□□□ -0.06
MBD1-220ENST00000589758 SRGAP2O75044 1071 aa14.7□□□□□ -0.06
MBD1-220ENST00000589758 GFPT2O94808 682 aa14.7□□□□□ -0.06
MBD1-220ENST00000589758 PRNPP04156 253 aa14.7□□□□□ -0.06
MBD1-220ENST00000589758 CYP1A1P04798 512 aaPredicted RBP14.7□□□□□ -0.06
MBD1-220ENST00000589758 ITGAVP06756 1048 aa14.7□□□□□ -0.06
MBD1-220ENST00000589758 CHRNA3P32297 505 aa14.7□□□□□ -0.06
MBD1-220ENST00000589758 SOX5P35711 763 aa14.7□□□□□ -0.06
MBD1-220ENST00000589758 RECQLP46063 649 aaPredicted RBP14.7□□□□□ -0.06
MBD1-220ENST00000589758 ARRB1P49407 418 aaPredicted RBP14.7□□□□□ -0.06
MBD1-220ENST00000589758 METAP1P53582 386 aa14.7□□□□□ -0.06
MBD1-220ENST00000589758 POLR2FP61218 127 aaKnown RBP14.7□□□□□ -0.06
MBD1-220ENST00000589758 IL9RQ01113 521 aa14.7□□□□□ -0.06
MBD1-220ENST00000589758 CDR2Q01850 454 aa14.7□□□□□ -0.06
MBD1-220ENST00000589758 SLC20A2Q08357 652 aa14.7□□□□□ -0.06
MBD1-220ENST00000589758 STAT4Q14765 748 aa14.7□□□□□ -0.06
MBD1-220ENST00000589758 SYCP1Q15431 976 aa14.7□□□□□ -0.06
MBD1-220ENST00000589758 ARL13BQ3SXY8 428 aa14.7□□□□□ -0.06
MBD1-220ENST00000589758 SETMARQ53H47 684 aaPredicted RBP14.7□□□□□ -0.06
MBD1-220ENST00000589758 AGBL4Q5VU57 503 aa14.7□□□□□ -0.06
MBD1-220ENST00000589758 NEK5Q6P3R8 708 aa14.7□□□□□ -0.06
MBD1-220ENST00000589758 TRIM72Q6ZMU5 477 aa14.7□□□□□ -0.06
MBD1-220ENST00000589758 TFAP2DQ7Z6R9 452 aa14.7□□□□□ -0.06
MBD1-220ENST00000589758 GALNT15Q8N3T1 639 aa14.7□□□□□ -0.06
MBD1-220ENST00000589758 TMIEQ8NEW7 156 aa14.7□□□□□ -0.06
MBD1-220ENST00000589758 OR2A12Q8NGT7 310 aa14.7□□□□□ -0.06
MBD1-220ENST00000589758 CFAP57Q96MR6 1250 aa14.7□□□□□ -0.06
MBD1-220ENST00000589758 ZYG11BQ9C0D3 744 aa14.7□□□□□ -0.06
MBD1-220ENST00000589758 RETREG1Q9H6L5 497 aa14.7□□□□□ -0.06
MBD1-220ENST00000589758 ERVMER34-1Q9H9K5 563 aa14.7□□□□□ -0.06
MBD1-220ENST00000589758 PREBQ9HCU5 417 aa14.7□□□□□ -0.06
MBD1-220ENST00000589758 METTL5Q9NRN9 209 aaKnown RBP14.7□□□□□ -0.06
MBD1-220ENST00000589758 FAM207AQ9NSI2 230 aaPredicted RBP14.7□□□□□ -0.06
MBD1-220ENST00000589758 MPP6Q9NZW5 540 aa14.7□□□□□ -0.06
MBD1-220ENST00000589758 ARHGAP20Q9P2F6 1191 aa14.7□□□□□ -0.06
MBD1-220ENST00000589758 PPARGC1AQ9UBK2 798 aaKnown RBP14.7□□□□□ -0.06
MBD1-220ENST00000589758 FTSJ1Q9UET6 329 aa14.7□□□□□ -0.06
MBD1-220ENST00000589758 TP53BP1Q12888 1972 aaPredicted RBP14.7□□□□□ -0.06
MBD1-220ENST00000589758 USP24Q9UPU5 2620 aa14.7□□□□□ -0.06
MBD1-220ENST00000589758 A0A0D9SEW6 157 aa14.69□□□□□ -0.06
MBD1-220ENST00000589758 GOLGA8CPA6NN73 597 aa14.69□□□□□ -0.06
MBD1-220ENST00000589758 PRAMEF26H0Y7S4 382 aa14.69□□□□□ -0.06
MBD1-220ENST00000589758 PLK4O00444 970 aa14.69□□□□□ -0.06
MBD1-220ENST00000589758 KPNA3O00505 521 aaPredicted RBP14.69□□□□□ -0.06
MBD1-220ENST00000589758 WNT9AO14904 365 aa14.69□□□□□ -0.06
MBD1-220ENST00000589758 SNAP91O60641 907 aa14.69□□□□□ -0.06
MBD1-220ENST00000589758 RNGTTO60942 597 aaKnown RBP14.69□□□□□ -0.06
MBD1-220ENST00000589758 MT-CO1P00395 513 aa14.69□□□□□ -0.06
MBD1-220ENST00000589758 MMP8P22894 467 aa14.69□□□□□ -0.06
MBD1-220ENST00000589758 STAT1P42224 750 aa14.69□□□□□ -0.06
MBD1-220ENST00000589758 JAM2P57087 298 aa14.69□□□□□ -0.06
MBD1-220ENST00000589758 NXPH1P58417 271 aa14.69□□□□□ -0.06
MBD1-220ENST00000589758 PPP2CBP62714 309 aa14.69□□□□□ -0.06
MBD1-220ENST00000589758 PPP2CAP67775 309 aa14.69□□□□□ -0.06
MBD1-220ENST00000589758 SCAPQ12770 1279 aa14.69□□□□□ -0.06
MBD1-220ENST00000589758 TRNP1Q6NT89 227 aa14.69□□□□□ -0.06
MBD1-220ENST00000589758 RETSATQ6NUM9 610 aa14.69□□□□□ -0.06
MBD1-220ENST00000589758 APTXQ7Z2E3 356 aaKnown RBP14.69□□□□□ -0.06
MBD1-220ENST00000589758 FAM131BQ86XD5 332 aa14.69□□□□□ -0.06
MBD1-220ENST00000589758 SLC20A1Q8WUM9 679 aa14.69□□□□□ -0.06
MBD1-220ENST00000589758 NLRC4Q9NPP4 1024 aa14.69□□□□□ -0.06
MBD1-220ENST00000589758 DYRK4Q9NR20 520 aa14.69□□□□□ -0.06
MBD1-220ENST00000589758 TMPRSS4Q9NRS4 437 aa14.69□□□□□ -0.06
MBD1-220ENST00000589758 NOCTQ9UK39 431 aaKnown RBP14.69□□□□□ -0.06
MBD1-220ENST00000589758 COL5A1P20908 1838 aaPredicted RBP14.69□□□□□ -0.06
MBD1-220ENST00000589758 CXorf51AA0A1B0GTR3 108 aa14.68□□□□□ -0.06
MBD1-220ENST00000589758 GOLGA6L19H0YKK7 550 aa14.68□□□□□ -0.06
MBD1-220ENST00000589758 K7ERQ8 282 aa14.68□□□□□ -0.06
MBD1-220ENST00000589758 LDOC1O95751 146 aaPredicted RBP14.68□□□□□ -0.06
MBD1-220ENST00000589758 CAPNS1P04632 268 aa14.68□□□□□ -0.06
MBD1-220ENST00000589758 CDK4P11802 303 aa14.68□□□□□ -0.06
MBD1-220ENST00000589758 RRM1P23921 792 aa14.68□□□□□ -0.06
MBD1-220ENST00000589758 MAT2AP31153 395 aaKnown RBP14.68□□□□□ -0.06
MBD1-220ENST00000589758 SDC4P31431 198 aa14.68□□□□□ -0.06
MBD1-220ENST00000589758 ETFBP38117 255 aa14.68□□□□□ -0.06
MBD1-220ENST00000589758 RXRGP48443 463 aa14.68□□□□□ -0.06
MBD1-220ENST00000589758 TPM4P67936 248 aa14.68□□□□□ -0.06
MBD1-220ENST00000589758 ATP11AP98196 1134 aa14.68□□□□□ -0.06
MBD1-220ENST00000589758 FMO1Q01740 532 aa14.68□□□□□ -0.06
MBD1-220ENST00000589758 SHBQ15464 509 aa14.68□□□□□ -0.06
MBD1-220ENST00000589758 POM121L1PQ3SYA9 428 aa14.68□□□□□ -0.06
MBD1-220ENST00000589758 PRAMEF14Q5SWL7 426 aa14.68□□□□□ -0.06
MBD1-220ENST00000589758 C22orf39Q6P5X5 142 aa14.68□□□□□ -0.06
MBD1-220ENST00000589758 PROSER1Q86XN7 944 aa14.68□□□□□ -0.06
MBD1-220ENST00000589758 GATAD2AQ86YP4 633 aa14.68□□□□□ -0.06
MBD1-220ENST00000589758 EMC1Q8N766 993 aa14.68□□□□□ -0.06
MBD1-220ENST00000589758 NEK11Q8NG66 645 aa14.68□□□□□ -0.06
MBD1-220ENST00000589758 OR7D4Q8NG98 312 aa14.68□□□□□ -0.06
MBD1-220ENST00000589758 SAP25Q8TEE9 199 aa14.68□□□□□ -0.06
MBD1-220ENST00000589758 RXFP2Q8WXD0 754 aa14.68□□□□□ -0.06
MBD1-220ENST00000589758 SPON2Q9BUD6 331 aa14.68□□□□□ -0.06
MBD1-220ENST00000589758 CEP44Q9C0F1 390 aa14.68□□□□□ -0.06
MBD1-220ENST00000589758 TSPY26PQ9H489 355 aa14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms