RNA–Protein interactions for RNA: ENST00000588892.1

U2AF1L4-210, Transcript of U2 small nuclear RNA auxiliary factor 1 like 4, human

TSL 2

Gene U2AF1L4, Length 2,582 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
U2AF1L4-210	ENST00000588892	CHD7	Q9P2D1	2997 aa		11.45	□□□□□ -0.58
U2AF1L4-210	ENST00000588892	ZNF638	Q14966	1978 aa	Known RBP	11.45	□□□□□ -0.58
U2AF1L4-210	ENST00000588892	SF3B1	O75533	1304 aa	Known RBP eCLIP	11.45	□□□□□ -0.58	8e-6	■■■■■ 107
U2AF1L4-210	ENST00000588892	LOC101059915	A0A1B0GWI6	518 aa	Predicted RBP	11.45	□□□□□ -0.58
U2AF1L4-210	ENST00000588892		H3BSA7	217 aa		11.45	□□□□□ -0.58
U2AF1L4-210	ENST00000588892	MCF2L	O15068	1137 aa		11.45	□□□□□ -0.58
U2AF1L4-210	ENST00000588892	OR4Q2	P0C623	313 aa		11.45	□□□□□ -0.58
U2AF1L4-210	ENST00000588892	WASHC5	Q12768	1159 aa		11.45	□□□□□ -0.58
U2AF1L4-210	ENST00000588892	TUSC3	Q13454	348 aa		11.45	□□□□□ -0.58
U2AF1L4-210	ENST00000588892	KCNJ11	Q14654	390 aa		11.45	□□□□□ -0.58
U2AF1L4-210	ENST00000588892	GPRIN1	Q7Z2K8	1008 aa		11.45	□□□□□ -0.58
U2AF1L4-210	ENST00000588892	LRRTM3	Q86VH5	581 aa		11.45	□□□□□ -0.58
U2AF1L4-210	ENST00000588892	WDR75	Q8IWA0	830 aa	Known RBP	11.45	□□□□□ -0.58
U2AF1L4-210	ENST00000588892	OR10T2	Q8NGX3	314 aa		11.45	□□□□□ -0.58
U2AF1L4-210	ENST00000588892	TFB1M	Q8WVM0	346 aa	Known RBP	11.45	□□□□□ -0.58
U2AF1L4-210	ENST00000588892	SLC4A5	Q9BY07	1137 aa		11.45	□□□□□ -0.58
U2AF1L4-210	ENST00000588892	LIN28A	Q9H9Z2	209 aa	Known RBP	11.45	□□□□□ -0.58
U2AF1L4-210	ENST00000588892	TBC1D13	Q9NVG8	400 aa		11.45	□□□□□ -0.58
U2AF1L4-210	ENST00000588892	TDRKH	Q9Y2W6	561 aa	Known RBP	11.45	□□□□□ -0.58
U2AF1L4-210	ENST00000588892	NT5C1B-RDH14	C9J2C7	533 aa		11.44	□□□□□ -0.58
U2AF1L4-210	ENST00000588892	NDC80	O14777	642 aa		11.44	□□□□□ -0.58
U2AF1L4-210	ENST00000588892	DCX	O43602	365 aa		11.44	□□□□□ -0.58
U2AF1L4-210	ENST00000588892	GSR	P00390	522 aa		11.44	□□□□□ -0.58
U2AF1L4-210	ENST00000588892	APRT	P07741	180 aa		11.44	□□□□□ -0.58
U2AF1L4-210	ENST00000588892	ITGB8	P26012	769 aa		11.44	□□□□□ -0.58
U2AF1L4-210	ENST00000588892	ARRB2	P32121	409 aa		11.44	□□□□□ -0.58
U2AF1L4-210	ENST00000588892	ADAR	P55265	1226 aa	Known RBP	11.44	□□□□□ -0.58
U2AF1L4-210	ENST00000588892	FAM189B	P81408	668 aa		11.44	□□□□□ -0.58
U2AF1L4-210	ENST00000588892	MYBPC1	Q00872	1141 aa		11.44	□□□□□ -0.58
U2AF1L4-210	ENST00000588892	PIGZ	Q86VD9	579 aa		11.44	□□□□□ -0.58
U2AF1L4-210	ENST00000588892	TRIM42	Q8IWZ5	723 aa		11.44	□□□□□ -0.58
U2AF1L4-210	ENST00000588892	MPP5	Q8N3R9	675 aa		11.44	□□□□□ -0.58
U2AF1L4-210	ENST00000588892	CCDC33	Q8N5R6	958 aa		11.44	□□□□□ -0.58
U2AF1L4-210	ENST00000588892	ANKRD52	Q8NB46	1076 aa		11.44	□□□□□ -0.58
U2AF1L4-210	ENST00000588892	RXFP2	Q8WXD0	754 aa		11.44	□□□□□ -0.58
U2AF1L4-210	ENST00000588892	PGBD4	Q96DM1	585 aa		11.44	□□□□□ -0.58
U2AF1L4-210	ENST00000588892	HSPBAP1	Q96EW2	488 aa		11.44	□□□□□ -0.58
U2AF1L4-210	ENST00000588892	HIPK3	Q9H422	1215 aa		11.44	□□□□□ -0.58
U2AF1L4-210	ENST00000588892	THAP1	Q9NVV9	213 aa		11.44	□□□□□ -0.58
U2AF1L4-210	ENST00000588892	HESX1	Q9UBX0	185 aa		11.44	□□□□□ -0.58
U2AF1L4-210	ENST00000588892	KIAA1257	Q9ULG3	409 aa		11.44	□□□□□ -0.58
U2AF1L4-210	ENST00000588892	SQOR	Q9Y6N5	450 aa		11.44	□□□□□ -0.58
U2AF1L4-210	ENST00000588892		F5H423	210 aa	Predicted RBP	11.44	□□□□□ -0.58
U2AF1L4-210	ENST00000588892	HNRNPC	P07910	306 aa	Known RBP eCLIP	11.44	□□□□□ -0.58
U2AF1L4-210	ENST00000588892	SLC5A2	P31639	672 aa		11.44	□□□□□ -0.58
U2AF1L4-210	ENST00000588892	OR1G1	P47890	313 aa		11.44	□□□□□ -0.58
U2AF1L4-210	ENST00000588892	SLC1A6	P48664	564 aa		11.44	□□□□□ -0.58
U2AF1L4-210	ENST00000588892	MAP3K7CL	P57077	242 aa		11.44	□□□□□ -0.58
U2AF1L4-210	ENST00000588892	PITX1	P78337	314 aa	Predicted RBP	11.44	□□□□□ -0.58
U2AF1L4-210	ENST00000588892	TBCC	Q15814	346 aa		11.44	□□□□□ -0.58
U2AF1L4-210	ENST00000588892	CNGA3	Q16281	694 aa		11.44	□□□□□ -0.58
U2AF1L4-210	ENST00000588892	C6orf52	Q5T4I8	152 aa		11.44	□□□□□ -0.58
U2AF1L4-210	ENST00000588892	LIN28B	Q6ZN17	250 aa	Known RBP eCLIP	11.44	□□□□□ -0.58
U2AF1L4-210	ENST00000588892	CLEC20A	Q6ZU45	233 aa		11.44	□□□□□ -0.58
U2AF1L4-210	ENST00000588892	TMEM110	Q86TL2	294 aa		11.44	□□□□□ -0.58
U2AF1L4-210	ENST00000588892	KBTBD6	Q86V97	674 aa		11.44	□□□□□ -0.58
U2AF1L4-210	ENST00000588892	TMEM173	Q86WV6	379 aa	Predicted RBP	11.44	□□□□□ -0.58
U2AF1L4-210	ENST00000588892	GALNT4	Q8N4A0	578 aa		11.44	□□□□□ -0.58
U2AF1L4-210	ENST00000588892	RNF148	Q8N7C7	305 aa		11.44	□□□□□ -0.58
U2AF1L4-210	ENST00000588892	ZMIZ2	Q8NF64	920 aa		11.44	□□□□□ -0.58
U2AF1L4-210	ENST00000588892	AGR3	Q8TD06	166 aa		11.44	□□□□□ -0.58
U2AF1L4-210	ENST00000588892	ACTRT2	Q8TDY3	377 aa		11.44	□□□□□ -0.58
U2AF1L4-210	ENST00000588892	GAB3	Q8WWW8	586 aa		11.44	□□□□□ -0.58
U2AF1L4-210	ENST00000588892	TSPAN18	Q96SJ8	248 aa		11.44	□□□□□ -0.58
U2AF1L4-210	ENST00000588892	MRPL1	Q9BYD6	325 aa	Known RBP	11.44	□□□□□ -0.58
U2AF1L4-210	ENST00000588892	RBM38	Q9H0Z9	239 aa	Known RBP	11.44	□□□□□ -0.58
U2AF1L4-210	ENST00000588892	POPDC2	Q9HBU9	364 aa		11.44	□□□□□ -0.58
U2AF1L4-210	ENST00000588892	C2CD4B	A6NLJ0	364 aa		11.43	□□□□□ -0.58
U2AF1L4-210	ENST00000588892		H7C0C1	242 aa		11.43	□□□□□ -0.58
U2AF1L4-210	ENST00000588892	CRTAM	O95727	393 aa		11.43	□□□□□ -0.58
U2AF1L4-210	ENST00000588892	DES	P17661	470 aa		11.43	□□□□□ -0.58
U2AF1L4-210	ENST00000588892	ATP5O	P48047	213 aa		11.43	□□□□□ -0.58
U2AF1L4-210	ENST00000588892	IDH3A	P50213	366 aa		11.43	□□□□□ -0.58
U2AF1L4-210	ENST00000588892	EMP3	P54852	163 aa		11.43	□□□□□ -0.58
U2AF1L4-210	ENST00000588892	COG7	P83436	770 aa		11.43	□□□□□ -0.58
U2AF1L4-210	ENST00000588892	ROR1	Q01973	937 aa		11.43	□□□□□ -0.58
U2AF1L4-210	ENST00000588892	PDK1	Q15118	436 aa		11.43	□□□□□ -0.58
U2AF1L4-210	ENST00000588892	CCDC14	Q49A88	953 aa		11.43	□□□□□ -0.58
U2AF1L4-210	ENST00000588892	TMEM259	Q4ZIN3	620 aa		11.43	□□□□□ -0.58
U2AF1L4-210	ENST00000588892	TEDDM1	Q5T9Z0	273 aa		11.43	□□□□□ -0.58
U2AF1L4-210	ENST00000588892	PDPK2P	Q6A1A2	396 aa		11.43	□□□□□ -0.58
U2AF1L4-210	ENST00000588892	GLB1L	Q6UWU2	654 aa		11.43	□□□□□ -0.58
U2AF1L4-210	ENST00000588892	CYP4V2	Q6ZWL3	525 aa	Predicted RBP	11.43	□□□□□ -0.58
U2AF1L4-210	ENST00000588892	CAND1	Q86VP6	1230 aa	Known RBP	11.43	□□□□□ -0.58
U2AF1L4-210	ENST00000588892	MAP7D3	Q8IWC1	876 aa		11.43	□□□□□ -0.58
U2AF1L4-210	ENST00000588892	COLGALT2	Q8IYK4	626 aa		11.43	□□□□□ -0.58
U2AF1L4-210	ENST00000588892	FBXW8	Q8N3Y1	598 aa		11.43	□□□□□ -0.58
U2AF1L4-210	ENST00000588892	RSPH1	Q8WYR4	309 aa		11.43	□□□□□ -0.58
U2AF1L4-210	ENST00000588892	OXCT2	Q9BYC2	517 aa	Predicted RBP	11.43	□□□□□ -0.58
U2AF1L4-210	ENST00000588892	AP4B1	Q9Y6B7	739 aa		11.43	□□□□□ -0.58
U2AF1L4-210	ENST00000588892	APOC4-APOC2	K7ER74	178 aa		11.43	□□□□□ -0.58
U2AF1L4-210	ENST00000588892	KCNN4	O15554	427 aa		11.43	□□□□□ -0.58
U2AF1L4-210	ENST00000588892	APOC2	P02655	101 aa		11.43	□□□□□ -0.58
U2AF1L4-210	ENST00000588892	SRGAP2B	P0DMP2	458 aa		11.43	□□□□□ -0.58
U2AF1L4-210	ENST00000588892	FGF3	P11487	239 aa	Predicted RBP	11.43	□□□□□ -0.58
U2AF1L4-210	ENST00000588892	PDGFRA	P16234	1089 aa		11.43	□□□□□ -0.58
U2AF1L4-210	ENST00000588892	NELFE	P18615	380 aa	Known RBP	11.43	□□□□□ -0.58
U2AF1L4-210	ENST00000588892	MIP	P30301	263 aa		11.43	□□□□□ -0.58
U2AF1L4-210	ENST00000588892	GRIA1	P42261	906 aa		11.43	□□□□□ -0.58
U2AF1L4-210	ENST00000588892	BCAT1	P54687	386 aa		11.43	□□□□□ -0.58

Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms