RNA–Protein interactions for RNA: ENST00000588618.5

ACTN4-210, Transcript of actinin alpha 4, humanhuman

TSL 1 (best)

Gene ACTN4, Length 1,729 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-210ENST00000588618 WFIKKN2Q8TEU8 576 aa23.08■■□□□ 1.29
ACTN4-210ENST00000588618 EXOC4Q96A65 974 aa23.08■■□□□ 1.29
ACTN4-210ENST00000588618 RHOXF2Q9BQY4 288 aa23.08■■□□□ 1.29
ACTN4-210ENST00000588618 HAUS2Q9NVX0 235 aa23.08■■□□□ 1.29
ACTN4-210ENST00000588618 INTS6Q9UL03 887 aaKnown RBP23.08■■□□□ 1.29
ACTN4-210ENST00000588618 SLC27A6Q9Y2P4 619 aa23.08■■□□□ 1.29
ACTN4-210ENST00000588618 CCNB1P14635 433 aa23.08■■□□□ 1.28
ACTN4-210ENST00000588618 POLR2EP19388 210 aaKnown RBP23.08■■□□□ 1.28
ACTN4-210ENST00000588618 RENBPP51606 427 aa23.08■■□□□ 1.28
ACTN4-210ENST00000588618 CLCN6P51797 869 aa23.08■■□□□ 1.28
ACTN4-210ENST00000588618 PLK1P53350 603 aa23.08■■□□□ 1.28
ACTN4-210ENST00000588618 GEMIN4P57678 1058 aaKnown RBP23.08■■□□□ 1.28
ACTN4-210ENST00000588618 ZP2Q05996 745 aa23.08■■□□□ 1.28
ACTN4-210ENST00000588618 SULT2A1Q06520 285 aa23.08■■□□□ 1.28
ACTN4-210ENST00000588618 MESP2Q0VG99 397 aa23.08■■□□□ 1.28
ACTN4-210ENST00000588618 WASHC5Q12768 1159 aa23.08■■□□□ 1.28
ACTN4-210ENST00000588618 TRIP13Q15645 432 aaPredicted RBP23.08■■□□□ 1.28
ACTN4-210ENST00000588618 ERCC6LQ2NKX8 1250 aa23.08■■□□□ 1.28
ACTN4-210ENST00000588618 BBS5Q8N3I7 341 aa23.08■■□□□ 1.28
ACTN4-210ENST00000588618 ATXN2LQ8WWM7 1075 aaKnown RBP23.08■■□□□ 1.28
ACTN4-210ENST00000588618 RTP4Q96DX8 246 aa23.08■■□□□ 1.28
ACTN4-210ENST00000588618 UBA2Q9UBT2 640 aaPredicted RBP23.08■■□□□ 1.28
ACTN4-210ENST00000588618 VPS51Q9UID3 782 aa23.08■■□□□ 1.28
ACTN4-210ENST00000588618 ACTL7AQ9Y615 435 aa23.08■■□□□ 1.28
ACTN4-210ENST00000588618 RNF103O00237 685 aa23.07■■□□□ 1.28
ACTN4-210ENST00000588618 SLC6A11P48066 632 aa23.07■■□□□ 1.28
ACTN4-210ENST00000588618 KDSRQ06136 332 aa23.07■■□□□ 1.28
ACTN4-210ENST00000588618 ZBTB17Q13105 803 aa23.07■■□□□ 1.28
ACTN4-210ENST00000588618 FUT11Q495W5 492 aa23.07■■□□□ 1.28
ACTN4-210ENST00000588618 MARC1Q5VT66 337 aa23.07■■□□□ 1.28
ACTN4-210ENST00000588618 NAIF1Q69YI7 327 aaPredicted RBP23.07■■□□□ 1.28
ACTN4-210ENST00000588618 LEKR1Q6ZMV7 388 aa23.07■■□□□ 1.28
ACTN4-210ENST00000588618 SYDE1Q6ZW31 735 aaPredicted RBP23.07■■□□□ 1.28
ACTN4-210ENST00000588618 DDX51Q8N8A6 666 aaKnown RBP eCLIP23.07■■□□□ 1.284e-6■■■□□ 14.9
ACTN4-210ENST00000588618 CCHCR1Q8TD31 782 aa23.07■■□□□ 1.28
ACTN4-210ENST00000588618 ZNF599Q96NL3 588 aa23.07■■□□□ 1.28
ACTN4-210ENST00000588618 PNKPQ96T60 521 aa23.07■■□□□ 1.28
ACTN4-210ENST00000588618 VAT1Q99536 393 aa23.07■■□□□ 1.28
ACTN4-210ENST00000588618 PDFQ9HBH1 243 aa23.07■■□□□ 1.28
ACTN4-210ENST00000588618 KLHL8Q9P2G9 620 aaPredicted RBP23.07■■□□□ 1.28
ACTN4-210ENST00000588618 SNAP91O60641 907 aa23.06■■□□□ 1.28
ACTN4-210ENST00000588618 SRFP11831 508 aa23.06■■□□□ 1.28
ACTN4-210ENST00000588618 HNRNPDQ14103 355 aaKnown RBP23.06■■□□□ 1.28
ACTN4-210ENST00000588618 GLE1Q53GS7 698 aaKnown RBP23.06■■□□□ 1.28
ACTN4-210ENST00000588618 TMCO4Q5TGY1 634 aa23.06■■□□□ 1.28
ACTN4-210ENST00000588618 CIPCQ9C0C6 399 aa23.06■■□□□ 1.28
ACTN4-210ENST00000588618 SLC25A13Q9UJS0 675 aa23.06■■□□□ 1.28
ACTN4-210ENST00000588618 TTLL3Q9Y4R7 772 aa23.06■■□□□ 1.28
ACTN4-210ENST00000588618 FAM187AA6NFU0 413 aa23.05■■□□□ 1.28
ACTN4-210ENST00000588618 ZMPSTE24O75844 475 aa23.05■■□□□ 1.28
ACTN4-210ENST00000588618 KRT14P02533 472 aa23.05■■□□□ 1.28
ACTN4-210ENST00000588618 ATP5BP06576 529 aaKnown RBP23.05■■□□□ 1.28
ACTN4-210ENST00000588618 CISD3P0C7P0 127 aa23.05■■□□□ 1.28
ACTN4-210ENST00000588618 SOX9P48436 509 aa23.05■■□□□ 1.28
ACTN4-210ENST00000588618 ARF5P84085 180 aa23.05■■□□□ 1.28
ACTN4-210ENST00000588618 RFTN1Q14699 578 aaPredicted RBP23.05■■□□□ 1.28
ACTN4-210ENST00000588618 TRADDQ15628 312 aa23.05■■□□□ 1.28
ACTN4-210ENST00000588618 GEN1Q17RS7 908 aa23.05■■□□□ 1.28
ACTN4-210ENST00000588618 P3H1Q32P28 736 aa23.05■■□□□ 1.28
ACTN4-210ENST00000588618 MBLAC2Q68D91 279 aa23.05■■□□□ 1.28
ACTN4-210ENST00000588618 ARHGEF18Q6ZSZ5 1173 aa23.05■■□□□ 1.28
ACTN4-210ENST00000588618 MYRIPQ8NFW9 859 aa23.05■■□□□ 1.28
ACTN4-210ENST00000588618 CCDC110Q8TBZ0 833 aa23.05■■□□□ 1.28
ACTN4-210ENST00000588618 USP33Q8TEY7 942 aa23.05■■□□□ 1.28
ACTN4-210ENST00000588618 FATE1Q969F0 183 aa23.05■■□□□ 1.28
ACTN4-210ENST00000588618 C8orf33Q9H7E9 229 aaPredicted RBP23.05■■□□□ 1.28
ACTN4-210ENST00000588618 ANKZF1Q9H8Y5 726 aa23.05■■□□□ 1.28
ACTN4-210ENST00000588618 ASIC3Q9UHC3 531 aa23.05■■□□□ 1.28
ACTN4-210ENST00000588618 UTP11Q9Y3A2 253 aaKnown RBP23.05■■□□□ 1.28
ACTN4-210ENST00000588618 PIAS3Q9Y6X2 628 aa23.05■■□□□ 1.28
ACTN4-210ENST00000588618 TBC1D3BA6NDS4 549 aa23.05■■□□□ 1.28
ACTN4-210ENST00000588618 BHMG1C9JSJ3 638 aaPredicted RBP23.05■■□□□ 1.28
ACTN4-210ENST00000588618 JCHAINP01591 159 aa23.05■■□□□ 1.28
ACTN4-210ENST00000588618 PTPN3P26045 913 aa23.05■■□□□ 1.28
ACTN4-210ENST00000588618 OPRD1P41143 372 aa23.05■■□□□ 1.28
ACTN4-210ENST00000588618 VPS41P49754 854 aa23.05■■□□□ 1.28
ACTN4-210ENST00000588618 IFI35P80217 286 aaPredicted RBP23.05■■□□□ 1.28
ACTN4-210ENST00000588618 PTK6Q13882 451 aa23.05■■□□□ 1.28
ACTN4-210ENST00000588618 ZNF235Q14590 738 aa23.05■■□□□ 1.28
ACTN4-210ENST00000588618 LBRQ14739 615 aaKnown RBP23.05■■□□□ 1.28
ACTN4-210ENST00000588618 LINGO4Q6UY18 593 aa23.05■■□□□ 1.28
ACTN4-210ENST00000588618 TERB1Q8NA31 727 aa23.05■■□□□ 1.28
ACTN4-210ENST00000588618 UBXN4Q92575 508 aa23.05■■□□□ 1.28
ACTN4-210ENST00000588618 MAML1Q92585 1016 aa23.05■■□□□ 1.28
ACTN4-210ENST00000588618 RAB17Q9H0T7 212 aa23.05■■□□□ 1.28
ACTN4-210ENST00000588618 PCDH9Q9HC56 1237 aa23.05■■□□□ 1.28
ACTN4-210ENST00000588618 HEBP1Q9NRV9 189 aa23.05■■□□□ 1.28
ACTN4-210ENST00000588618 RBM22Q9NW64 420 aaKnown RBP eCLIP23.05■■□□□ 1.287e-7■■■□□ 15.5
ACTN4-210ENST00000588618 TRHDEQ9UKU6 1024 aa23.05■■□□□ 1.28
ACTN4-210ENST00000588618 F5P12259 2224 aa23.04■■□□□ 1.28
ACTN4-210ENST00000588618 A0A0A0MRY4 1105 aa23.04■■□□□ 1.28
ACTN4-210ENST00000588618 C5orf60A6NFR6 353 aa23.04■■□□□ 1.28
ACTN4-210ENST00000588618 NARSO43776 548 aaKnown RBP23.04■■□□□ 1.28
ACTN4-210ENST00000588618 HEXIM1O94992 359 aaKnown RBP23.04■■□□□ 1.28
ACTN4-210ENST00000588618 CD160O95971 181 aa23.04■■□□□ 1.28
ACTN4-210ENST00000588618 APODP05090 189 aa23.04■■□□□ 1.28
ACTN4-210ENST00000588618 RPL22P35268 128 aaKnown RBP23.04■■□□□ 1.28
ACTN4-210ENST00000588618 MMP13P45452 471 aa23.04■■□□□ 1.28
ACTN4-210ENST00000588618 ECT2LQ008S8 904 aa23.04■■□□□ 1.28
ACTN4-210ENST00000588618 EIF4HQ15056 248 aaKnown RBP23.04■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms