RNA–Protein interactions for RNA: ENST00000588483.1

TPM4-209, Transcript of tropomyosin 4, humanhuman

TSL 5

Gene TPM4, Length 801 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-209ENST00000588483 CBFA2T2O43439 604 aa10.73□□□□□ -0.69
TPM4-209ENST00000588483 GJB3O75712 270 aa10.73□□□□□ -0.69
TPM4-209ENST00000588483 CD160O95971 181 aa10.73□□□□□ -0.69
TPM4-209ENST00000588483 IGHV4-34P06331 123 aa10.73□□□□□ -0.69
TPM4-209ENST00000588483 PSMD8P48556 350 aa10.73□□□□□ -0.69
TPM4-209ENST00000588483 SERPINH1P50454 418 aaKnown RBP10.73□□□□□ -0.69
TPM4-209ENST00000588483 ZNF135P52742 658 aaPredicted RBP10.73□□□□□ -0.69
TPM4-209ENST00000588483 ADPRHP54922 357 aa10.73□□□□□ -0.69
TPM4-209ENST00000588483 GEMIN4P57678 1058 aaKnown RBP10.73□□□□□ -0.69
TPM4-209ENST00000588483 ARF5P84085 180 aa10.73□□□□□ -0.69
TPM4-209ENST00000588483 GFPT1Q06210 699 aaPredicted RBP10.73□□□□□ -0.69
TPM4-209ENST00000588483 TRIM14Q14142 442 aa10.73□□□□□ -0.69
TPM4-209ENST00000588483 ACAP1Q15027 740 aa10.73□□□□□ -0.69
TPM4-209ENST00000588483 TDRD12Q587J7 1177 aaKnown RBP10.73□□□□□ -0.69
TPM4-209ENST00000588483 FAM46CQ5VWP2 391 aa10.73□□□□□ -0.69
TPM4-209ENST00000588483 DAB2IPQ5VWQ8 1189 aa10.73□□□□□ -0.69
TPM4-209ENST00000588483 RETSATQ6NUM9 610 aa10.73□□□□□ -0.69
TPM4-209ENST00000588483 C22orf39Q6P5X5 142 aa10.73□□□□□ -0.69
TPM4-209ENST00000588483 Q6ZVU0 165 aa10.73□□□□□ -0.69
TPM4-209ENST00000588483 CYP4V2Q6ZWL3 525 aaPredicted RBP10.73□□□□□ -0.69
TPM4-209ENST00000588483 FAM124AQ86V42 546 aa10.73□□□□□ -0.69
TPM4-209ENST00000588483 VPS36Q86VN1 386 aa10.73□□□□□ -0.69
TPM4-209ENST00000588483 RGL4Q8IZJ4 473 aa10.73□□□□□ -0.69
TPM4-209ENST00000588483 PCDH20Q8N6Y1 951 aaKnown RBP10.73□□□□□ -0.69
TPM4-209ENST00000588483 RTL3Q8N8U3 475 aaKnown RBP10.73□□□□□ -0.69
TPM4-209ENST00000588483 TMIEQ8NEW7 156 aa10.73□□□□□ -0.69
TPM4-209ENST00000588483 OR2A12Q8NGT7 310 aa10.73□□□□□ -0.69
TPM4-209ENST00000588483 OR2T34Q8NGX1 318 aa10.73□□□□□ -0.69
TPM4-209ENST00000588483 ARHGEF2Q92974 986 aaKnown RBP10.73□□□□□ -0.69
TPM4-209ENST00000588483 ISG20Q96AZ6 181 aaKnown RBP10.73□□□□□ -0.69
TPM4-209ENST00000588483 BIRC7Q96CA5 298 aa10.73□□□□□ -0.69
TPM4-209ENST00000588483 ZNF653Q96CK0 615 aa10.73□□□□□ -0.69
TPM4-209ENST00000588483 CCDC114Q96M63 670 aa10.73□□□□□ -0.69
TPM4-209ENST00000588483 DNAJC7Q99615 494 aa10.73□□□□□ -0.69
TPM4-209ENST00000588483 EPAS1Q99814 870 aa10.73□□□□□ -0.69
TPM4-209ENST00000588483 NCAPGQ9BPX3 1015 aa10.73□□□□□ -0.69
TPM4-209ENST00000588483 MAGEB5Q9BZ81 275 aa10.73□□□□□ -0.69
TPM4-209ENST00000588483 NEUROG2Q9H2A3 272 aa10.73□□□□□ -0.69
TPM4-209ENST00000588483 ATP13A1Q9HD20 1204 aa10.73□□□□□ -0.69
TPM4-209ENST00000588483 DNAAF2Q9NVR5 837 aaKnown RBP10.73□□□□□ -0.69
TPM4-209ENST00000588483 ARHGAP20Q9P2F6 1191 aa10.73□□□□□ -0.69
TPM4-209ENST00000588483 SARDHQ9UL12 918 aa10.73□□□□□ -0.69
TPM4-209ENST00000588483 ADAMTS9Q9P2N4 1935 aa10.73□□□□□ -0.69
TPM4-209ENST00000588483 CABIN1Q9Y6J0 2220 aa10.73□□□□□ -0.69
TPM4-209ENST00000588483 DCDC2BA2VCK2 349 aa10.72□□□□□ -0.69
TPM4-209ENST00000588483 ZSCAN5CA6NGD5 496 aaPredicted RBP10.72□□□□□ -0.69
TPM4-209ENST00000588483 LRRC72A6NJI9 287 aa10.72□□□□□ -0.69
TPM4-209ENST00000588483 C1QTNF3-AMACRE9PGA6 284 aa10.72□□□□□ -0.69
TPM4-209ENST00000588483 CBX4O00257 560 aa10.72□□□□□ -0.69
TPM4-209ENST00000588483 BCAT2O15382 392 aaPredicted RBP10.72□□□□□ -0.69
TPM4-209ENST00000588483 SMAD6O43541 496 aaKnown RBP10.72□□□□□ -0.69
TPM4-209ENST00000588483 LATO43561 262 aa10.72□□□□□ -0.69
TPM4-209ENST00000588483 PLRG1O43660 514 aaKnown RBP10.72□□□□□ -0.69
TPM4-209ENST00000588483 RAMP2O60895 175 aa10.72□□□□□ -0.69
TPM4-209ENST00000588483 LRCH4O75427 683 aa10.72□□□□□ -0.69
TPM4-209ENST00000588483 RNASEH2AO75792 299 aaKnown RBP10.72□□□□□ -0.69
TPM4-209ENST00000588483 IL1BP01584 269 aa10.72□□□□□ -0.69
TPM4-209ENST00000588483 CFIP05156 583 aa10.72□□□□□ -0.69
TPM4-209ENST00000588483 CTSLP07711 333 aa10.72□□□□□ -0.69
TPM4-209ENST00000588483 SYPP08247 313 aa10.72□□□□□ -0.69
TPM4-209ENST00000588483 CSRP1P21291 193 aaKnown RBP10.72□□□□□ -0.69
TPM4-209ENST00000588483 GLDCP23378 1020 aa10.72□□□□□ -0.69
TPM4-209ENST00000588483 PSMA2P25787 234 aa10.72□□□□□ -0.69
TPM4-209ENST00000588483 CD27P26842 260 aa10.72□□□□□ -0.69
TPM4-209ENST00000588483 MAOBP27338 520 aa10.72□□□□□ -0.69
TPM4-209ENST00000588483 EPHB2P29323 1055 aa10.72□□□□□ -0.69
TPM4-209ENST00000588483 CASP14P31944 242 aa10.72□□□□□ -0.69
TPM4-209ENST00000588483 PCK1P35558 622 aa10.72□□□□□ -0.69
TPM4-209ENST00000588483 GRIA4P48058 902 aa10.72□□□□□ -0.69
TPM4-209ENST00000588483 CCR5P51681 352 aa10.72□□□□□ -0.69
TPM4-209ENST00000588483 AFF3P51826 1226 aaKnown RBP10.72□□□□□ -0.69
TPM4-209ENST00000588483 GALCP54803 685 aa10.72□□□□□ -0.69
TPM4-209ENST00000588483 YBEYP58557 167 aaPredicted RBP10.72□□□□□ -0.69
TPM4-209ENST00000588483 NFKBIBQ15653 356 aa10.72□□□□□ -0.69
TPM4-209ENST00000588483 AGBL4Q5VU57 503 aa10.72□□□□□ -0.69
TPM4-209ENST00000588483 KIAA0895LQ68EN5 471 aa10.72□□□□□ -0.69
TPM4-209ENST00000588483 SPECC1LQ69YQ0 1117 aa10.72□□□□□ -0.69
TPM4-209ENST00000588483 RWDD4Q6NW29 188 aaKnown RBP10.72□□□□□ -0.69
TPM4-209ENST00000588483 DNAAF5Q86Y56 855 aa10.72□□□□□ -0.69
TPM4-209ENST00000588483 UMODL1-AS1Q8N2C9 162 aa10.72□□□□□ -0.69
TPM4-209ENST00000588483 PYROXD2Q8N2H3 581 aa10.72□□□□□ -0.69
TPM4-209ENST00000588483 ZCCHC9Q8N567 271 aaKnown RBP10.72□□□□□ -0.69
TPM4-209ENST00000588483 NIPA2Q8N8Q9 360 aa10.72□□□□□ -0.69
TPM4-209ENST00000588483 ATP11CQ8NB49 1132 aa10.72□□□□□ -0.69
TPM4-209ENST00000588483 PIP4K2CQ8TBX8 421 aa10.72□□□□□ -0.69
TPM4-209ENST00000588483 OMDQ99983 421 aa10.72□□□□□ -0.69
TPM4-209ENST00000588483 TRIM7Q9C029 511 aa10.72□□□□□ -0.69
TPM4-209ENST00000588483 NOL6Q9H6R4 1146 aaKnown RBP10.72□□□□□ -0.69
TPM4-209ENST00000588483 CATSPERBQ9H7T0 1116 aa10.72□□□□□ -0.69
TPM4-209ENST00000588483 DONSONQ9NYP3 566 aa10.72□□□□□ -0.69
TPM4-209ENST00000588483 EIF2B4Q9UI10 523 aaKnown RBP10.72□□□□□ -0.69
TPM4-209ENST00000588483 A0A087X0T9 212 aa10.71□□□□□ -0.69
TPM4-209ENST00000588483 A0A1W2PPC4 97 aa10.71□□□□□ -0.69
TPM4-209ENST00000588483 SSU72P8A0A1W2PR75 194 aa10.71□□□□□ -0.69
TPM4-209ENST00000588483 K7ERQ8 282 aa10.71□□□□□ -0.69
TPM4-209ENST00000588483 KDELR3O43731 214 aa10.71□□□□□ -0.69
TPM4-209ENST00000588483 PLXNA2O75051 1894 aa10.71□□□□□ -0.69
TPM4-209ENST00000588483 RNF8O76064 485 aa10.71□□□□□ -0.69
TPM4-209ENST00000588483 PRNPP04156 253 aa10.71□□□□□ -0.69
TPM4-209ENST00000588483 CYP1A2P05177 515 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms