RNA–Protein interactions for RNA: ENST00000587774.1

TRIM47-205, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 720 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-205ENST00000587774 RRM1P23921 792 aa19.24■□□□□ 0.67
TRIM47-205ENST00000587774 NXPH1P58417 271 aa19.24■□□□□ 0.67
TRIM47-205ENST00000587774 KRT83P78385 493 aa19.24■□□□□ 0.67
TRIM47-205ENST00000587774 CT47A1Q5JQC4 288 aaPredicted RBP19.24■□□□□ 0.67
TRIM47-205ENST00000587774 CDKAL1Q5VV42 579 aa19.24■□□□□ 0.67
TRIM47-205ENST00000587774 LRRC31Q6UY01 552 aa19.24■□□□□ 0.67
TRIM47-205ENST00000587774 TMPRSS7Q7RTY8 843 aa19.24■□□□□ 0.67
TRIM47-205ENST00000587774 SETD3Q86TU7 594 aaPredicted RBP19.24■□□□□ 0.67
TRIM47-205ENST00000587774 TRIM69Q86WT6 500 aa19.24■□□□□ 0.67
TRIM47-205ENST00000587774 DCAF4L2Q8NA75 395 aa19.24■□□□□ 0.67
TRIM47-205ENST00000587774 ATP11CQ8NB49 1132 aa19.24■□□□□ 0.67
TRIM47-205ENST00000587774 C1orf74Q96LT6 269 aa19.24■□□□□ 0.67
TRIM47-205ENST00000587774 VPS16Q9H269 839 aa19.24■□□□□ 0.67
TRIM47-205ENST00000587774 METTL5Q9NRN9 209 aaKnown RBP19.24■□□□□ 0.67
TRIM47-205ENST00000587774 LMBRD1Q9NUN5 540 aa19.24■□□□□ 0.67
TRIM47-205ENST00000587774 FTSJ1Q9UET6 329 aa19.24■□□□□ 0.67
TRIM47-205ENST00000587774 LRP4O75096 1905 aa19.23■□□□□ 0.67
TRIM47-205ENST00000587774 SMAD6O43541 496 aaKnown RBP19.23■□□□□ 0.67
TRIM47-205ENST00000587774 GFPT2O94808 682 aa19.23■□□□□ 0.67
TRIM47-205ENST00000587774 GLDCP23378 1020 aa19.23■□□□□ 0.67
TRIM47-205ENST00000587774 EPHA8P29322 1005 aaPredicted RBP19.23■□□□□ 0.67
TRIM47-205ENST00000587774 TAS2R38P59533 333 aa19.23■□□□□ 0.67
TRIM47-205ENST00000587774 KRT31Q15323 416 aa19.23■□□□□ 0.67
TRIM47-205ENST00000587774 CCDC157Q569K6 752 aa19.23■□□□□ 0.67
TRIM47-205ENST00000587774 SLC45A4Q5BKX6 768 aa19.23■□□□□ 0.67
TRIM47-205ENST00000587774 C6orf118Q5T5N4 469 aa19.23■□□□□ 0.67
TRIM47-205ENST00000587774 PIP5KL1Q5T9C9 394 aa19.23■□□□□ 0.67
TRIM47-205ENST00000587774 LINGO4Q6UY18 593 aa19.23■□□□□ 0.67
TRIM47-205ENST00000587774 PRPF39Q86UA1 669 aaKnown RBP19.23■□□□□ 0.67
TRIM47-205ENST00000587774 FAM131BQ86XD5 332 aa19.23■□□□□ 0.67
TRIM47-205ENST00000587774 MARCH9Q86YJ5 346 aa19.23■□□□□ 0.67
TRIM47-205ENST00000587774 EMC1Q8N766 993 aa19.23■□□□□ 0.67
TRIM47-205ENST00000587774 OR2A12Q8NGT7 310 aa19.23■□□□□ 0.67
TRIM47-205ENST00000587774 ENOX1Q8TC92 643 aaKnown RBP19.23■□□□□ 0.67
TRIM47-205ENST00000587774 SAP25Q8TEE9 199 aa19.23■□□□□ 0.67
TRIM47-205ENST00000587774 ZNF212Q9UDV6 495 aa19.23■□□□□ 0.67
TRIM47-205ENST00000587774 CACNA1GO43497 2377 aa19.23■□□□□ 0.67
TRIM47-205ENST00000587774 IGSF10Q6WRI0 2623 aa19.23■□□□□ 0.67
TRIM47-205ENST00000587774 TLR4O00206 839 aa19.22■□□□□ 0.67
TRIM47-205ENST00000587774 CBX4O00257 560 aa19.22■□□□□ 0.67
TRIM47-205ENST00000587774 EPHB6O15197 1021 aa19.22■□□□□ 0.67
TRIM47-205ENST00000587774 SRGAP2O75044 1071 aa19.22■□□□□ 0.67
TRIM47-205ENST00000587774 OR1E1P30953 314 aa19.22■□□□□ 0.67
TRIM47-205ENST00000587774 JAM2P57087 298 aa19.22■□□□□ 0.67
TRIM47-205ENST00000587774 ACBD5Q5T8D3 534 aaPredicted RBP19.22■□□□□ 0.67
TRIM47-205ENST00000587774 C22orf39Q6P5X5 142 aa19.22■□□□□ 0.67
TRIM47-205ENST00000587774 CLEC17AQ6ZS10 378 aa19.22■□□□□ 0.67
TRIM47-205ENST00000587774 ARCQ7LC44 396 aa19.22■□□□□ 0.67
TRIM47-205ENST00000587774 ZNF677Q86XU0 584 aa19.22■□□□□ 0.67
TRIM47-205ENST00000587774 MFSD2AQ8NA29 543 aa19.22■□□□□ 0.67
TRIM47-205ENST00000587774 OR7D4Q8NG98 312 aa19.22■□□□□ 0.67
TRIM47-205ENST00000587774 CCDC114Q96M63 670 aa19.22■□□□□ 0.67
TRIM47-205ENST00000587774 HAPLN3Q96S86 360 aa19.22■□□□□ 0.67
TRIM47-205ENST00000587774 FAM207AQ9NSI2 230 aaPredicted RBP19.22■□□□□ 0.67
TRIM47-205ENST00000587774 TMEM51Q9NW97 253 aa19.22■□□□□ 0.67
TRIM47-205ENST00000587774 DMTF1Q9Y222 760 aa19.22■□□□□ 0.67
TRIM47-205ENST00000587774 BPTFQ12830 3046 aa19.22■□□□□ 0.67
TRIM47-205ENST00000587774 SHROOM3Q8TF72 1996 aa19.21■□□□□ 0.67
TRIM47-205ENST00000587774 URB1O60287 2271 aaKnown RBP19.21■□□□□ 0.67
TRIM47-205ENST00000587774 RNF103O00237 685 aa19.21■□□□□ 0.67
TRIM47-205ENST00000587774 KPNA3O00505 521 aaPredicted RBP19.21■□□□□ 0.67
TRIM47-205ENST00000587774 YKT6O15498 198 aa19.21■□□□□ 0.67
TRIM47-205ENST00000587774 ITGAVP06756 1048 aa19.21■□□□□ 0.67
TRIM47-205ENST00000587774 CHRNA3P32297 505 aa19.21■□□□□ 0.67
TRIM47-205ENST00000587774 NUDT1P36639 197 aa19.21■□□□□ 0.67
TRIM47-205ENST00000587774 ARRB1P49407 418 aaPredicted RBP19.21■□□□□ 0.67
TRIM47-205ENST00000587774 CLCN6P51797 869 aa19.21■□□□□ 0.67
TRIM47-205ENST00000587774 POLR2FP61218 127 aaKnown RBP19.21■□□□□ 0.67
TRIM47-205ENST00000587774 ATP11AP98196 1134 aa19.21■□□□□ 0.67
TRIM47-205ENST00000587774 FMO1Q01740 532 aa19.21■□□□□ 0.67
TRIM47-205ENST00000587774 CDR2Q01850 454 aa19.21■□□□□ 0.67
TRIM47-205ENST00000587774 CDO1Q16878 200 aa19.21■□□□□ 0.67
TRIM47-205ENST00000587774 SETMARQ53H47 684 aaPredicted RBP19.21■□□□□ 0.67
TRIM47-205ENST00000587774 RAB6CQ53S08 254 aa19.21■□□□□ 0.67
TRIM47-205ENST00000587774 SPATS2Q86XZ4 545 aaKnown RBP19.21■□□□□ 0.67
TRIM47-205ENST00000587774 CHST14Q8NCH0 376 aa19.21■□□□□ 0.67
TRIM47-205ENST00000587774 MDM1Q8TC05 714 aa19.21■□□□□ 0.67
TRIM47-205ENST00000587774 ARRDC3Q96B67 414 aa19.21■□□□□ 0.67
TRIM47-205ENST00000587774 ZYG11BQ9C0D3 744 aa19.21■□□□□ 0.67
TRIM47-205ENST00000587774 RAB6CQ9H0N0 254 aa19.21■□□□□ 0.67
TRIM47-205ENST00000587774 TNKS2Q9H2K2 1166 aa19.21■□□□□ 0.67
TRIM47-205ENST00000587774 ERVMER34-1Q9H9K5 563 aa19.21■□□□□ 0.67
TRIM47-205ENST00000587774 PREBQ9HCU5 417 aa19.21■□□□□ 0.67
TRIM47-205ENST00000587774 NLRC4Q9NPP4 1024 aa19.21■□□□□ 0.67
TRIM47-205ENST00000587774 FARP1Q9Y4F1 1045 aaPredicted RBP19.21■□□□□ 0.67
TRIM47-205ENST00000587774 COL27A1Q8IZC6 1860 aaPredicted RBP19.2■□□□□ 0.66
TRIM47-205ENST00000587774 FAM149AA5PLN7 773 aa19.2■□□□□ 0.66
TRIM47-205ENST00000587774 CYP1A1P04798 512 aaPredicted RBP19.2■□□□□ 0.66
TRIM47-205ENST00000587774 CHRNB2P17787 502 aa19.2■□□□□ 0.66
TRIM47-205ENST00000587774 MMP8P22894 467 aa19.2■□□□□ 0.66
TRIM47-205ENST00000587774 SOX5P35711 763 aa19.2■□□□□ 0.66
TRIM47-205ENST00000587774 SMAD1Q15797 465 aaKnown RBP19.2■□□□□ 0.66
TRIM47-205ENST00000587774 C15orf59Q2T9L4 293 aaPredicted RBP19.2■□□□□ 0.66
TRIM47-205ENST00000587774 DHRS13Q6UX07 377 aa19.2■□□□□ 0.66
TRIM47-205ENST00000587774 RBM43Q6ZSC3 357 aaKnown RBP19.2■□□□□ 0.66
TRIM47-205ENST00000587774 GALNT15Q8N3T1 639 aa19.2■□□□□ 0.66
TRIM47-205ENST00000587774 OXR1Q8N573 874 aa19.2■□□□□ 0.66
TRIM47-205ENST00000587774 GRIN3AQ8TCU5 1115 aa19.2■□□□□ 0.66
TRIM47-205ENST00000587774 GPT2Q8TD30 523 aa19.2■□□□□ 0.66
TRIM47-205ENST00000587774 C11orf70Q9BRQ4 267 aa19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 91.2 ms