RNA–Protein interactions for RNA: ENST00000587760.5

NFIX-209, Transcript of nuclear factor I X, humanhuman

TSL 1 (best) BASIC

Gene NFIX, Length 1,487 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIX-209ENST00000587760 MYO18AQ92614 2054 aaKnown RBP17.26■□□□□ 0.35
NFIX-209ENST00000587760 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP17.25■□□□□ 0.35
NFIX-209ENST00000587760 FAM237BA0A1B0GVD1 139 aa17.25■□□□□ 0.35
NFIX-209ENST00000587760 ILVBLA1L0T0 632 aa17.25■□□□□ 0.35
NFIX-209ENST00000587760 FAM47DPA6NHR8 397 aa17.25■□□□□ 0.35
NFIX-209ENST00000587760 SOBPA7XYQ1 873 aa17.25■□□□□ 0.35
NFIX-209ENST00000587760 C5orf67F2Z3F1 127 aa17.25■□□□□ 0.35
NFIX-209ENST00000587760 F5H423 210 aaPredicted RBP17.25■□□□□ 0.35
NFIX-209ENST00000587760 PRAMEF11O60813 436 aa17.25■□□□□ 0.35
NFIX-209ENST00000587760 FAM155BO75949 473 aa17.25■□□□□ 0.35
NFIX-209ENST00000587760 HDCP19113 662 aa17.25■□□□□ 0.35
NFIX-209ENST00000587760 SMAD3P84022 425 aaKnown RBP17.25■□□□□ 0.35
NFIX-209ENST00000587760 ZNF177Q13360 481 aaPredicted RBP17.25■□□□□ 0.35
NFIX-209ENST00000587760 RFTN1Q14699 578 aaPredicted RBP17.25■□□□□ 0.35
NFIX-209ENST00000587760 ELMSAN1Q6PJG2 1045 aa17.25■□□□□ 0.35
NFIX-209ENST00000587760 TMEM150AQ86TG1 271 aa17.25■□□□□ 0.35
NFIX-209ENST00000587760 PPM1NQ8N819 430 aa17.25■□□□□ 0.35
NFIX-209ENST00000587760 LEMD2Q8NC56 503 aa17.25■□□□□ 0.35
NFIX-209ENST00000587760 USP33Q8TEY7 942 aa17.25■□□□□ 0.35
NFIX-209ENST00000587760 ARNTL2Q8WYA1 636 aa17.25■□□□□ 0.35
NFIX-209ENST00000587760 TBL1YQ9BQ87 522 aa17.25■□□□□ 0.35
NFIX-209ENST00000587760 FSD1LQ9BXM9 530 aa17.25■□□□□ 0.35
NFIX-209ENST00000587760 RNF38Q9H0F5 515 aa17.25■□□□□ 0.35
NFIX-209ENST00000587760 IL21Q9HBE4 155 aa17.25■□□□□ 0.35
NFIX-209ENST00000587760 TRPC7Q9HCX4 862 aa17.25■□□□□ 0.35
NFIX-209ENST00000587760 ZFP37Q9Y6Q3 630 aaPredicted RBP17.25■□□□□ 0.35
NFIX-209ENST00000587760 GOLGA6L7A0A1B0GV03 622 aa17.24■□□□□ 0.35
NFIX-209ENST00000587760 C2orf78A6NCI8 922 aa17.24■□□□□ 0.35
NFIX-209ENST00000587760 USP1O94782 785 aa17.24■□□□□ 0.35
NFIX-209ENST00000587760 PEX11BO96011 259 aa17.24■□□□□ 0.35
NFIX-209ENST00000587760 MT-ND3P03897 115 aa17.24■□□□□ 0.35
NFIX-209ENST00000587760 HLA-DQB2P05538 268 aa17.24■□□□□ 0.35
NFIX-209ENST00000587760 SNRPAP09012 282 aaKnown RBP17.24■□□□□ 0.35
NFIX-209ENST00000587760 DDX6P26196 483 aaKnown RBP eCLIP17.24■□□□□ 0.35
NFIX-209ENST00000587760 GABRR2P28476 465 aa17.24■□□□□ 0.35
NFIX-209ENST00000587760 SLC6A4P31645 630 aa17.24■□□□□ 0.35
NFIX-209ENST00000587760 GNA12Q03113 381 aa17.24■□□□□ 0.35
NFIX-209ENST00000587760 MGAT5Q09328 741 aa17.24■□□□□ 0.35
NFIX-209ENST00000587760 DNAJC3Q13217 504 aa17.24■□□□□ 0.35
NFIX-209ENST00000587760 CRYMQ14894 314 aa17.24■□□□□ 0.35
NFIX-209ENST00000587760 SLC14A2Q15849 920 aa17.24■□□□□ 0.35
NFIX-209ENST00000587760 PPM1LQ5SGD2 360 aa17.24■□□□□ 0.35
NFIX-209ENST00000587760 POTEHQ6S545 545 aa17.24■□□□□ 0.35
NFIX-209ENST00000587760 MARK2Q7KZI7 788 aaKnown RBP17.24■□□□□ 0.35
NFIX-209ENST00000587760 MPP5Q8N3R9 675 aa17.24■□□□□ 0.35
NFIX-209ENST00000587760 DYDC1Q8WWB3 177 aa17.24■□□□□ 0.35
NFIX-209ENST00000587760 PABPC5Q96DU9 382 aaKnown RBP17.24■□□□□ 0.35
NFIX-209ENST00000587760 OXNAD1Q96HP4 312 aaPredicted RBP17.24■□□□□ 0.35
NFIX-209ENST00000587760 ZNF334Q9HCZ1 680 aaPredicted RBP17.24■□□□□ 0.35
NFIX-209ENST00000587760 ASAH2Q9NR71 780 aa17.24■□□□□ 0.35
NFIX-209ENST00000587760 SYBUQ9NX95 663 aa17.24■□□□□ 0.35
NFIX-209ENST00000587760 AGO1Q9UL18 857 aaKnown RBP17.24■□□□□ 0.35
NFIX-209ENST00000587760 ALPK3Q96L96 1907 aa17.24■□□□□ 0.35
NFIX-209ENST00000587760 TRAV19A0A0A6YYK7 116 aa17.24■□□□□ 0.35
NFIX-209ENST00000587760 GMNCA6NCL1 334 aa17.24■□□□□ 0.35
NFIX-209ENST00000587760 C2orf71A6NGG8 1288 aa17.24■□□□□ 0.35
NFIX-209ENST00000587760 C1QAP02745 245 aa17.24■□□□□ 0.35
NFIX-209ENST00000587760 HOXA9P31269 272 aa17.24■□□□□ 0.35
NFIX-209ENST00000587760 SLC7A9P82251 487 aa17.24■□□□□ 0.35
NFIX-209ENST00000587760 SPARCL1Q14515 664 aa17.24■□□□□ 0.35
NFIX-209ENST00000587760 EFTUD2Q15029 972 aaKnown RBP eCLIP17.24■□□□□ 0.353e-7■■■□□ 15.7
NFIX-209ENST00000587760 OTOP3Q7RTS5 596 aa17.24■□□□□ 0.35
NFIX-209ENST00000587760 TMEM135Q86UB9 458 aa17.24■□□□□ 0.35
NFIX-209ENST00000587760 SERBP1Q8NC51 408 aaKnown RBP eCLIP17.24■□□□□ 0.35
NFIX-209ENST00000587760 HJURPQ8NCD3 748 aaPredicted RBP17.24■□□□□ 0.35
NFIX-209ENST00000587760 BCAS4Q8TDM0 211 aa17.24■□□□□ 0.35
NFIX-209ENST00000587760 POF1BQ8WVV4 589 aa17.24■□□□□ 0.35
NFIX-209ENST00000587760 IMP4Q96G21 291 aaKnown RBP17.24■□□□□ 0.35
NFIX-209ENST00000587760 POLR1EQ9GZS1 481 aaKnown RBP17.24■□□□□ 0.35
NFIX-209ENST00000587760 GKN1Q9NS71 199 aa17.24■□□□□ 0.35
NFIX-209ENST00000587760 NSMCE4AQ9NXX6 385 aa17.24■□□□□ 0.35
NFIX-209ENST00000587760 TXNDC16Q9P2K2 825 aa17.24■□□□□ 0.35
NFIX-209ENST00000587760 ZMYM5Q9UJ78 669 aa17.24■□□□□ 0.35
NFIX-209ENST00000587760 RPS6KL1Q9Y6S9 549 aa17.24■□□□□ 0.35
NFIX-209ENST00000587760 NYNRINQ9P2P1 1898 aaKnown RBP17.23■□□□□ 0.35
NFIX-209ENST00000587760 ZWINTO95229 277 aa17.23■□□□□ 0.35
NFIX-209ENST00000587760 KLKB1P03952 638 aa17.23■□□□□ 0.35
NFIX-209ENST00000587760 CES1P23141 567 aa17.23■□□□□ 0.35
NFIX-209ENST00000587760 OXCT1P55809 520 aa17.23■□□□□ 0.35
NFIX-209ENST00000587760 DMTNQ08495 405 aa17.23■□□□□ 0.35
NFIX-209ENST00000587760 ZNF235Q14590 738 aa17.23■□□□□ 0.35
NFIX-209ENST00000587760 LBRQ14739 615 aaKnown RBP17.23■□□□□ 0.35
NFIX-209ENST00000587760 PCID2Q5JVF3 399 aa17.23■□□□□ 0.35
NFIX-209ENST00000587760 TTC19Q6DKK2 380 aaPredicted RBP17.23■□□□□ 0.35
NFIX-209ENST00000587760 TMC8Q8IU68 726 aa17.23■□□□□ 0.35
NFIX-209ENST00000587760 IPMKQ8NFU5 416 aa17.23■□□□□ 0.35
NFIX-209ENST00000587760 MDM1Q8TC05 714 aa17.23■□□□□ 0.35
NFIX-209ENST00000587760 SPPL3Q8TCT6 385 aa17.23■□□□□ 0.35
NFIX-209ENST00000587760 ATXN2LQ8WWM7 1075 aaKnown RBP17.23■□□□□ 0.35
NFIX-209ENST00000587760 MRRFQ96E11 262 aaKnown RBP17.23■□□□□ 0.35
NFIX-209ENST00000587760 ZFRQ96KR1 1074 aaKnown RBP17.23■□□□□ 0.35
NFIX-209ENST00000587760 PRKD2Q9BZL6 878 aa17.23■□□□□ 0.35
NFIX-209ENST00000587760 PLAC1Q9HBJ0 212 aa17.23■□□□□ 0.35
NFIX-209ENST00000587760 ARNT2Q9HBZ2 717 aa17.23■□□□□ 0.35
NFIX-209ENST00000587760 MRM3Q9HC36 420 aaKnown RBP17.23■□□□□ 0.35
NFIX-209ENST00000587760 NT5MQ9NPB1 228 aa17.23■□□□□ 0.35
NFIX-209ENST00000587760 PPANQ9NQ55 473 aaKnown RBP17.23■□□□□ 0.35
NFIX-209ENST00000587760 SOX13Q9UN79 622 aa17.23■□□□□ 0.35
NFIX-209ENST00000587760 TBC1D30Q9Y2I9 924 aa17.23■□□□□ 0.35
NFIX-209ENST00000587760 FAM169AQ9Y6X4 670 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms