RNA–Protein interactions for RNA: ENST00000587537.5

CLPTM1-207, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 2

Gene CLPTM1, Length 737 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-207ENST00000587537 UTP11Q9Y3A2 253 aaKnown RBP10.56□□□□□ -0.72
CLPTM1-207ENST00000587537 TICRRQ7Z2Z1 1910 aa10.55□□□□□ -0.72
CLPTM1-207ENST00000587537 MYOFQ9NZM1 2061 aa10.55□□□□□ -0.72
CLPTM1-207ENST00000587537 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.55□□□□□ -0.72
CLPTM1-207ENST00000587537 TARSL2A2RTX5 802 aaKnown RBP10.55□□□□□ -0.72
CLPTM1-207ENST00000587537 AP3B1O00203 1094 aa10.55□□□□□ -0.72
CLPTM1-207ENST00000587537 CBX4O00257 560 aa10.55□□□□□ -0.72
CLPTM1-207ENST00000587537 SCAMP3O14828 347 aaKnown RBP10.55□□□□□ -0.72
CLPTM1-207ENST00000587537 KCNN4O15554 427 aa10.55□□□□□ -0.72
CLPTM1-207ENST00000587537 PSMD3O43242 534 aa10.55□□□□□ -0.72
CLPTM1-207ENST00000587537 DLDP09622 509 aaKnown RBP10.55□□□□□ -0.72
CLPTM1-207ENST00000587537 CISD3P0C7P0 127 aa10.55□□□□□ -0.72
CLPTM1-207ENST00000587537 IL9P15248 144 aa10.55□□□□□ -0.72
CLPTM1-207ENST00000587537 DRD1P21728 446 aa10.55□□□□□ -0.72
CLPTM1-207ENST00000587537 FDFT1P37268 417 aa10.55□□□□□ -0.72
CLPTM1-207ENST00000587537 CSKP41240 450 aa10.55□□□□□ -0.72
CLPTM1-207ENST00000587537 MMP13P45452 471 aa10.55□□□□□ -0.72
CLPTM1-207ENST00000587537 ST8SIA6P61647 398 aa10.55□□□□□ -0.72
CLPTM1-207ENST00000587537 CDK16Q00536 496 aa10.55□□□□□ -0.72
CLPTM1-207ENST00000587537 ECT2LQ008S8 904 aa10.55□□□□□ -0.72
CLPTM1-207ENST00000587537 CAV1Q03135 178 aa10.55□□□□□ -0.72
CLPTM1-207ENST00000587537 NSUN2Q08J23 767 aaKnown RBP eCLIP10.55□□□□□ -0.72
CLPTM1-207ENST00000587537 PTK6Q13882 451 aa10.55□□□□□ -0.72
CLPTM1-207ENST00000587537 ZNF235Q14590 738 aa10.55□□□□□ -0.72
CLPTM1-207ENST00000587537 HSF5Q4G112 596 aaPredicted RBP10.55□□□□□ -0.72
CLPTM1-207ENST00000587537 FSCBQ5H9T9 825 aa10.55□□□□□ -0.72
CLPTM1-207ENST00000587537 ARHGEF18Q6ZSZ5 1173 aa10.55□□□□□ -0.72
CLPTM1-207ENST00000587537 CEP128Q6ZU80 1094 aa10.55□□□□□ -0.72
CLPTM1-207ENST00000587537 TRMT11Q7Z4G4 463 aaKnown RBP10.55□□□□□ -0.72
CLPTM1-207ENST00000587537 KLHL7Q8IXQ5 586 aa10.55□□□□□ -0.72
CLPTM1-207ENST00000587537 EIF1ADQ8N9N8 165 aaKnown RBP10.55□□□□□ -0.72
CLPTM1-207ENST00000587537 TERB1Q8NA31 727 aa10.55□□□□□ -0.72
CLPTM1-207ENST00000587537 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP10.55□□□□□ -0.72
CLPTM1-207ENST00000587537 P2RY11Q96G91 374 aa10.55□□□□□ -0.72
CLPTM1-207ENST00000587537 ZFYVE19Q96K21 471 aa10.55□□□□□ -0.72
CLPTM1-207ENST00000587537 SPATA13Q96N96 652 aa10.55□□□□□ -0.72
CLPTM1-207ENST00000587537 PSKH2Q96QS6 385 aa10.55□□□□□ -0.72
CLPTM1-207ENST00000587537 LGMNQ99538 433 aa10.55□□□□□ -0.72
CLPTM1-207ENST00000587537 IL12RB2Q99665 862 aa10.55□□□□□ -0.72
CLPTM1-207ENST00000587537 P2RY13Q9BPV8 354 aa10.55□□□□□ -0.72
CLPTM1-207ENST00000587537 TMEM121Q9BTD3 319 aa10.55□□□□□ -0.72
CLPTM1-207ENST00000587537 SPON2Q9BUD6 331 aa10.55□□□□□ -0.72
CLPTM1-207ENST00000587537 FRMD8Q9BZ67 464 aaPredicted RBP10.55□□□□□ -0.72
CLPTM1-207ENST00000587537 POLR1EQ9GZS1 481 aaKnown RBP10.55□□□□□ -0.72
CLPTM1-207ENST00000587537 DDX47Q9H0S4 455 aaKnown RBP10.55□□□□□ -0.72
CLPTM1-207ENST00000587537 PDFQ9HBH1 243 aa10.55□□□□□ -0.72
CLPTM1-207ENST00000587537 USP29Q9HBJ7 922 aa10.55□□□□□ -0.72
CLPTM1-207ENST00000587537 RRAGDQ9NQL2 400 aaPredicted RBP10.55□□□□□ -0.72
CLPTM1-207ENST00000587537 PLK2Q9NYY3 685 aa10.55□□□□□ -0.72
CLPTM1-207ENST00000587537 SAE1Q9UBE0 346 aaPredicted RBP10.55□□□□□ -0.72
CLPTM1-207ENST00000587537 PLA2G4CQ9UP65 541 aa10.55□□□□□ -0.72
CLPTM1-207ENST00000587537 MRPS17Q9Y2R5 130 aaKnown RBP10.55□□□□□ -0.72
CLPTM1-207ENST00000587537 STARD13Q9Y3M8 1113 aa10.55□□□□□ -0.72
CLPTM1-207ENST00000587537 COL4A2P08572 1712 aa10.55□□□□□ -0.72
CLPTM1-207ENST00000587537 NYNRINQ9P2P1 1898 aaKnown RBP10.55□□□□□ -0.72
CLPTM1-207ENST00000587537 SHROOM3Q8TF72 1996 aa10.54□□□□□ -0.72
CLPTM1-207ENST00000587537 A0A0D9SEW6 157 aa10.54□□□□□ -0.72
CLPTM1-207ENST00000587537 SPECC1L-ADORA2AF8WAN1 911 aa10.54□□□□□ -0.72
CLPTM1-207ENST00000587537 RNF103O00237 685 aa10.54□□□□□ -0.72
CLPTM1-207ENST00000587537 ZMPSTE24O75844 475 aa10.54□□□□□ -0.72
CLPTM1-207ENST00000587537 ANXA9O76027 345 aa10.54□□□□□ -0.72
CLPTM1-207ENST00000587537 KAT7O95251 611 aa10.54□□□□□ -0.72
CLPTM1-207ENST00000587537 CA4P22748 312 aa10.54□□□□□ -0.72
CLPTM1-207ENST00000587537 SP100P23497 879 aaPredicted RBP10.54□□□□□ -0.72
CLPTM1-207ENST00000587537 MZF1P28698 734 aaPredicted RBP10.54□□□□□ -0.72
CLPTM1-207ENST00000587537 RBL1P28749 1068 aa10.54□□□□□ -0.72
CLPTM1-207ENST00000587537 CTHP32929 405 aa10.54□□□□□ -0.72
CLPTM1-207ENST00000587537 CD70P32970 193 aa10.54□□□□□ -0.72
CLPTM1-207ENST00000587537 ACVRL1P37023 503 aa10.54□□□□□ -0.72
CLPTM1-207ENST00000587537 CSNK1DP48730 415 aa10.54□□□□□ -0.72
CLPTM1-207ENST00000587537 SERPINH1P50454 418 aaKnown RBP10.54□□□□□ -0.72
CLPTM1-207ENST00000587537 TFF2Q03403 129 aa10.54□□□□□ -0.72
CLPTM1-207ENST00000587537 C2orf54Q08AI8 447 aa10.54□□□□□ -0.72
CLPTM1-207ENST00000587537 GRSF1Q12849 480 aaKnown RBP eCLIP10.54□□□□□ -0.72
CLPTM1-207ENST00000587537 SNX1Q13596 522 aa10.54□□□□□ -0.72
CLPTM1-207ENST00000587537 PRPSAP1Q14558 356 aa10.54□□□□□ -0.72
CLPTM1-207ENST00000587537 LBRQ14739 615 aaKnown RBP10.54□□□□□ -0.72
CLPTM1-207ENST00000587537 PARP6Q2NL67 630 aa10.54□□□□□ -0.72
CLPTM1-207ENST00000587537 GAB4Q2WGN9 574 aa10.54□□□□□ -0.72
CLPTM1-207ENST00000587537 ARMC3Q5W041 872 aa10.54□□□□□ -0.72
CLPTM1-207ENST00000587537 MBLAC2Q68D91 279 aa10.54□□□□□ -0.72
CLPTM1-207ENST00000587537 ALG1LQ6GMV1 187 aa10.54□□□□□ -0.72
CLPTM1-207ENST00000587537 JAMLQ86YT9 394 aa10.54□□□□□ -0.72
CLPTM1-207ENST00000587537 PCDH20Q8N6Y1 951 aaKnown RBP10.54□□□□□ -0.72
CLPTM1-207ENST00000587537 FAM71DQ8N9W8 422 aa10.54□□□□□ -0.72
CLPTM1-207ENST00000587537 OR7D4Q8NG98 312 aa10.54□□□□□ -0.72
CLPTM1-207ENST00000587537 UBXN4Q92575 508 aa10.54□□□□□ -0.72
CLPTM1-207ENST00000587537 BHMTQ93088 406 aa10.54□□□□□ -0.72
CLPTM1-207ENST00000587537 TEKT5Q96M29 485 aa10.54□□□□□ -0.72
CLPTM1-207ENST00000587537 ASB2Q96Q27 587 aa10.54□□□□□ -0.72
CLPTM1-207ENST00000587537 NELL2Q99435 816 aa10.54□□□□□ -0.72
CLPTM1-207ENST00000587537 ERP44Q9BS26 406 aa10.54□□□□□ -0.72
CLPTM1-207ENST00000587537 RPP25Q9BUL9 199 aaKnown RBP10.54□□□□□ -0.72
CLPTM1-207ENST00000587537 CINPQ9BW66 212 aaPredicted RBP10.54□□□□□ -0.72
CLPTM1-207ENST00000587537 TSPYL1Q9H0U9 437 aa10.54□□□□□ -0.72
CLPTM1-207ENST00000587537 VPS45Q9NRW7 570 aa10.54□□□□□ -0.72
CLPTM1-207ENST00000587537 ELOVL2Q9NXB9 296 aa10.54□□□□□ -0.72
CLPTM1-207ENST00000587537 GTSE1Q9NYZ3 720 aa10.54□□□□□ -0.72
CLPTM1-207ENST00000587537 SMARCAL1Q9NZC9 954 aa10.54□□□□□ -0.72
CLPTM1-207ENST00000587537 KLHL8Q9P2G9 620 aaPredicted RBP10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms