RNA–Protein interactions for RNA: ENST00000587260.1

NFIX-208, Transcript of nuclear factor I X, humanhuman

TSL 1 (best) BASIC

Gene NFIX, Length 1,537 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIX-208ENST00000587260 NECAB3Q96P71 396 aaPredicted RBP15.24■□□□□ 0.03
NFIX-208ENST00000587260 PNKPQ96T60 521 aa15.24■□□□□ 0.03
NFIX-208ENST00000587260 FERMT1Q9BQL6 677 aa15.24■□□□□ 0.03
NFIX-208ENST00000587260 PARD6BQ9BYG5 372 aa15.24■□□□□ 0.03
NFIX-208ENST00000587260 C10orf88Q9H8K7 445 aa15.24■□□□□ 0.03
NFIX-208ENST00000587260 EPB41L5Q9HCM4 733 aa15.24■□□□□ 0.03
NFIX-208ENST00000587260 ATP13A1Q9HD20 1204 aa15.24■□□□□ 0.03
NFIX-208ENST00000587260 KIAA1522Q9P206 1035 aaPredicted RBP15.24■□□□□ 0.03
NFIX-208ENST00000587260 DUSP12Q9UNI6 340 aa15.24■□□□□ 0.03
NFIX-208ENST00000587260 PIAS3Q9Y6X2 628 aa15.24■□□□□ 0.03
NFIX-208ENST00000587260 ZSCAN5CA6NGD5 496 aaPredicted RBP15.23■□□□□ 0.03
NFIX-208ENST00000587260 PABPC1P11940 636 aaKnown RBP15.23■□□□□ 0.03
NFIX-208ENST00000587260 GLDCP23378 1020 aa15.23■□□□□ 0.03
NFIX-208ENST00000587260 AP1B1Q10567 949 aa15.23■□□□□ 0.03
NFIX-208ENST00000587260 GEN1Q17RS7 908 aa15.23■□□□□ 0.03
NFIX-208ENST00000587260 PITRM1Q5JRX3 1037 aa15.23■□□□□ 0.03
NFIX-208ENST00000587260 GRAMD4Q6IC98 578 aa15.23■□□□□ 0.03
NFIX-208ENST00000587260 TIGD7Q6NT04 549 aaPredicted RBP15.23■□□□□ 0.03
NFIX-208ENST00000587260 LEKR1Q6ZMV7 388 aa15.23■□□□□ 0.03
NFIX-208ENST00000587260 RNF135Q8IUD6 432 aa15.23■□□□□ 0.03
NFIX-208ENST00000587260 CCDC13Q8IYE1 715 aa15.23■□□□□ 0.03
NFIX-208ENST00000587260 VAT1Q99536 393 aa15.23■□□□□ 0.03
NFIX-208ENST00000587260 SLC2A11Q9BYW1 496 aa15.23■□□□□ 0.03
NFIX-208ENST00000587260 FAM114A2Q9NRY5 505 aa15.23■□□□□ 0.03
NFIX-208ENST00000587260 DEC1Q9P2X7 70 aa15.23■□□□□ 0.03
NFIX-208ENST00000587260 SORCS3Q9UPU3 1222 aa15.23■□□□□ 0.03
NFIX-208ENST00000587260 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP15.22■□□□□ 0.03
NFIX-208ENST00000587260 SPECC1L-ADORA2AF8WAN1 911 aa15.22■□□□□ 0.03
NFIX-208ENST00000587260 CBX4O00257 560 aa15.22■□□□□ 0.03
NFIX-208ENST00000587260 SNAP91O60641 907 aa15.22■□□□□ 0.03
NFIX-208ENST00000587260 CTHP32929 405 aa15.22■□□□□ 0.03
NFIX-208ENST00000587260 RPL22P35268 128 aaKnown RBP15.22■□□□□ 0.03
NFIX-208ENST00000587260 ETFBP38117 255 aa15.22■□□□□ 0.03
NFIX-208ENST00000587260 OXCT1P55809 520 aa15.22■□□□□ 0.03
NFIX-208ENST00000587260 IFI35P80217 286 aaPredicted RBP15.22■□□□□ 0.03
NFIX-208ENST00000587260 PFKPQ01813 784 aa15.22■□□□□ 0.03
NFIX-208ENST00000587260 WASHC5Q12768 1159 aa15.22■□□□□ 0.03
NFIX-208ENST00000587260 SERINC3Q13530 473 aa15.22■□□□□ 0.03
NFIX-208ENST00000587260 CUL1Q13616 776 aa15.22■□□□□ 0.03
NFIX-208ENST00000587260 PLEKHG6Q3KR16 790 aa15.22■□□□□ 0.03
NFIX-208ENST00000587260 FAM182AQ5T1J6 154 aa15.22■□□□□ 0.03
NFIX-208ENST00000587260 TXNDC11Q6PKC3 985 aa15.22■□□□□ 0.03
NFIX-208ENST00000587260 SFTPA1Q8IWL2 248 aa15.22■□□□□ 0.03
NFIX-208ENST00000587260 ZNF557Q8N988 423 aaPredicted RBP15.22■□□□□ 0.03
NFIX-208ENST00000587260 LMLNQ96KR4 655 aa15.22■□□□□ 0.03
NFIX-208ENST00000587260 FEM1AQ9BSK4 669 aa15.22■□□□□ 0.03
NFIX-208ENST00000587260 ACE2Q9BYF1 805 aaPredicted RBP15.22■□□□□ 0.03
NFIX-208ENST00000587260 FAM129AQ9BZQ8 928 aa15.22■□□□□ 0.03
NFIX-208ENST00000587260 SP110Q9HB58 689 aa15.22■□□□□ 0.03
NFIX-208ENST00000587260 TRPV5Q9NQA5 729 aa15.22■□□□□ 0.03
NFIX-208ENST00000587260 SLC2A4RGQ9NR83 387 aa15.22■□□□□ 0.03
NFIX-208ENST00000587260 WHRNQ9P202 907 aa15.22■□□□□ 0.03
NFIX-208ENST00000587260 PAK5Q9P286 719 aa15.22■□□□□ 0.03
NFIX-208ENST00000587260 IPO11Q9UI26 975 aaKnown RBP15.22■□□□□ 0.03
NFIX-208ENST00000587260 FBXO10Q9UK96 956 aa15.22■□□□□ 0.03
NFIX-208ENST00000587260 INTS6Q9UL03 887 aaKnown RBP15.22■□□□□ 0.03
NFIX-208ENST00000587260 MUC22E2RYF6 1773 aaPredicted RBP15.22■□□□□ 0.03
NFIX-208ENST00000587260 MATN3O15232 486 aa15.22■□□□□ 0.03
NFIX-208ENST00000587260 IFNB1P01574 187 aa15.22■□□□□ 0.03
NFIX-208ENST00000587260 CISD3P0C7P0 127 aa15.22■□□□□ 0.03
NFIX-208ENST00000587260 ZSCAN5DPP0CG00 497 aa15.22■□□□□ 0.03
NFIX-208ENST00000587260 ETS1P14921 441 aa15.22■□□□□ 0.03
NFIX-208ENST00000587260 ITIH2P19823 946 aa15.22■□□□□ 0.03
NFIX-208ENST00000587260 ACTN2P35609 894 aa15.22■□□□□ 0.03
NFIX-208ENST00000587260 RPL21P46778 160 aaKnown RBP15.22■□□□□ 0.03
NFIX-208ENST00000587260 IL10RBQ08334 325 aa15.22■□□□□ 0.03
NFIX-208ENST00000587260 KCTD19Q17RG1 926 aaPredicted RBP15.22■□□□□ 0.03
NFIX-208ENST00000587260 CCNI2Q6ZMN8 369 aaPredicted RBP15.22■□□□□ 0.03
NFIX-208ENST00000587260 AHI1Q8N157 1196 aa15.22■□□□□ 0.03
NFIX-208ENST00000587260 TERB1Q8NA31 727 aa15.22■□□□□ 0.03
NFIX-208ENST00000587260 BBOF1Q8ND07 529 aa15.22■□□□□ 0.03
NFIX-208ENST00000587260 CASKIN2Q8WXE0 1202 aa15.22■□□□□ 0.03
NFIX-208ENST00000587260 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP15.22■□□□□ 0.038e-9■■■■■ 93.6
NFIX-208ENST00000587260 MAML1Q92585 1016 aa15.22■□□□□ 0.03
NFIX-208ENST00000587260 ALG14Q96F25 216 aa15.22■□□□□ 0.03
NFIX-208ENST00000587260 ASIC3Q9UHC3 531 aa15.22■□□□□ 0.03
NFIX-208ENST00000587260 VPS51Q9UID3 782 aa15.22■□□□□ 0.03
NFIX-208ENST00000587260 CA14Q9ULX7 337 aa15.22■□□□□ 0.03
NFIX-208ENST00000587260 OR51B4Q9Y5P0 310 aa15.22■□□□□ 0.03
NFIX-208ENST00000587260 ACTL7AQ9Y615 435 aa15.22■□□□□ 0.03
NFIX-208ENST00000587260 A0A0A0MRY4 1105 aa15.21■□□□□ 0.03
NFIX-208ENST00000587260 CXorf51AA0A1B0GTR3 108 aa15.21■□□□□ 0.03
NFIX-208ENST00000587260 PALM2-AKAP2B1ALY0 433 aaPredicted RBP15.21■□□□□ 0.03
NFIX-208ENST00000587260 J3KR12 359 aa15.21■□□□□ 0.03
NFIX-208ENST00000587260 RNF103O00237 685 aa15.21■□□□□ 0.03
NFIX-208ENST00000587260 NDC80O14777 642 aa15.21■□□□□ 0.03
NFIX-208ENST00000587260 OPHN1O60890 802 aa15.21■□□□□ 0.03
NFIX-208ENST00000587260 STK10O94804 968 aaKnown RBP15.21■□□□□ 0.03
NFIX-208ENST00000587260 PEX11BO96011 259 aa15.21■□□□□ 0.03
NFIX-208ENST00000587260 PTPN3P26045 913 aa15.21■□□□□ 0.03
NFIX-208ENST00000587260 ADCY8P40145 1251 aa15.21■□□□□ 0.03
NFIX-208ENST00000587260 CTSOP43234 321 aaPredicted RBP15.21■□□□□ 0.03
NFIX-208ENST00000587260 CLCN6P51797 869 aa15.21■□□□□ 0.03
NFIX-208ENST00000587260 PLK1P53350 603 aa15.21■□□□□ 0.03
NFIX-208ENST00000587260 VSNL1P62760 191 aa15.21■□□□□ 0.03
NFIX-208ENST00000587260 SLC12A1Q13621 1099 aa15.21■□□□□ 0.03
NFIX-208ENST00000587260 HNRNPDQ14103 355 aaKnown RBP15.21■□□□□ 0.03
NFIX-208ENST00000587260 TRADDQ15628 312 aa15.21■□□□□ 0.03
NFIX-208ENST00000587260 TRIP13Q15645 432 aaPredicted RBP15.21■□□□□ 0.03
NFIX-208ENST00000587260 TEX44Q53QW1 395 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms