RNA–Protein interactions for RNA: ENST00000587246.1

NEDD4L-217, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 5

Gene NEDD4L, Length 406 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-217ENST00000587246 CASQ2O14958 399 aaPredicted RBP3.57□□□□□ -1.84
NEDD4L-217ENST00000587246 SPTLC2O15270 562 aa3.57□□□□□ -1.84
NEDD4L-217ENST00000587246 FFAR2O15552 330 aa3.57□□□□□ -1.84
NEDD4L-217ENST00000587246 ZBTB43O43298 467 aa3.57□□□□□ -1.84
NEDD4L-217ENST00000587246 TBCAO75347 108 aaKnown RBP3.57□□□□□ -1.84
NEDD4L-217ENST00000587246 STAM2O75886 525 aa3.57□□□□□ -1.84
NEDD4L-217ENST00000587246 SNX4O95219 450 aa3.57□□□□□ -1.84
NEDD4L-217ENST00000587246 COL3A1P02461 1466 aaPredicted RBP3.57□□□□□ -1.84
NEDD4L-217ENST00000587246 GZMAP12544 262 aa3.57□□□□□ -1.84
NEDD4L-217ENST00000587246 FLT1P17948 1338 aa3.57□□□□□ -1.84
NEDD4L-217ENST00000587246 CCNCP24863 283 aa3.57□□□□□ -1.84
NEDD4L-217ENST00000587246 EEF1GP26641 437 aaKnown RBP3.57□□□□□ -1.84
NEDD4L-217ENST00000587246 TMOD1P28289 359 aa3.57□□□□□ -1.84
NEDD4L-217ENST00000587246 ATP5DP30049 168 aa3.57□□□□□ -1.84
NEDD4L-217ENST00000587246 NTSR1P30989 418 aa3.57□□□□□ -1.84
NEDD4L-217ENST00000587246 PTGER1P34995 402 aa3.57□□□□□ -1.84
NEDD4L-217ENST00000587246 HOXD13P35453 343 aa3.57□□□□□ -1.84
NEDD4L-217ENST00000587246 POLD2P49005 469 aa3.57□□□□□ -1.84
NEDD4L-217ENST00000587246 MXI1P50539 228 aa3.57□□□□□ -1.84
NEDD4L-217ENST00000587246 JAK3P52333 1124 aa3.57□□□□□ -1.84
NEDD4L-217ENST00000587246 RRP1P56182 461 aaKnown RBP3.57□□□□□ -1.84
NEDD4L-217ENST00000587246 NLRP5P59047 1200 aa3.57□□□□□ -1.84
NEDD4L-217ENST00000587246 IFI35P80217 286 aaPredicted RBP3.57□□□□□ -1.84
NEDD4L-217ENST00000587246 KLHL30Q0D2K2 578 aa3.57□□□□□ -1.84
NEDD4L-217ENST00000587246 GALNT1Q10472 559 aaPredicted RBP3.57□□□□□ -1.84
NEDD4L-217ENST00000587246 CUL4AQ13619 759 aa3.57□□□□□ -1.84
NEDD4L-217ENST00000587246 MFSD13AQ14CX5 517 aa3.57□□□□□ -1.84
NEDD4L-217ENST00000587246 TWIST1Q15672 202 aa3.57□□□□□ -1.84
NEDD4L-217ENST00000587246 PFKFB3Q16875 520 aaPredicted RBP3.57□□□□□ -1.84
NEDD4L-217ENST00000587246 FAM110CQ1W6H9 321 aa3.57□□□□□ -1.84
NEDD4L-217ENST00000587246 RABL6Q3YEC7 729 aaPredicted RBP3.57□□□□□ -1.84
NEDD4L-217ENST00000587246 GLE1Q53GS7 698 aaKnown RBP3.57□□□□□ -1.84
NEDD4L-217ENST00000587246 KLHDC7AQ5VTJ3 777 aa3.57□□□□□ -1.84
NEDD4L-217ENST00000587246 LRCH2Q5VUJ6 765 aa3.57□□□□□ -1.84
NEDD4L-217ENST00000587246 RRAGBQ5VZM2 374 aa3.57□□□□□ -1.84
NEDD4L-217ENST00000587246 FAM90A2PQ658T7 463 aa3.57□□□□□ -1.84
NEDD4L-217ENST00000587246 ZNF626Q68DY1 528 aa3.57□□□□□ -1.84
NEDD4L-217ENST00000587246 LIN54Q6MZP7 749 aa3.57□□□□□ -1.84
NEDD4L-217ENST00000587246 ARHGAP30Q7Z6I6 1101 aaPredicted RBP3.57□□□□□ -1.84
NEDD4L-217ENST00000587246 P3H2Q8IVL5 708 aa3.57□□□□□ -1.84
NEDD4L-217ENST00000587246 TXLNBQ8N3L3 684 aa3.57□□□□□ -1.84
NEDD4L-217ENST00000587246 ATG16L2Q8NAA4 619 aa3.57□□□□□ -1.84
NEDD4L-217ENST00000587246 TDRD7Q8NHU6 1098 aaKnown RBP3.57□□□□□ -1.84
NEDD4L-217ENST00000587246 DENND1AQ8TEH3 1009 aa3.57□□□□□ -1.84
NEDD4L-217ENST00000587246 DDB2Q92466 427 aa3.57□□□□□ -1.84
NEDD4L-217ENST00000587246 HTRA1Q92743 480 aa3.57□□□□□ -1.84
NEDD4L-217ENST00000587246 KAT6AQ92794 2004 aa3.57□□□□□ -1.84
NEDD4L-217ENST00000587246 ZNF845Q96IR2 970 aaPredicted RBP3.57□□□□□ -1.84
NEDD4L-217ENST00000587246 MAELQ96JY0 434 aaKnown RBP3.57□□□□□ -1.84
NEDD4L-217ENST00000587246 ZNF396Q96N95 335 aaPredicted RBP3.57□□□□□ -1.84
NEDD4L-217ENST00000587246 PCDHAC1Q9H158 963 aa3.57□□□□□ -1.84
NEDD4L-217ENST00000587246 USP29Q9HBJ7 922 aa3.57□□□□□ -1.84
NEDD4L-217ENST00000587246 CCDC177Q9NQR7 707 aaPredicted RBP3.57□□□□□ -1.84
NEDD4L-217ENST00000587246 KRT84Q9NSB2 600 aa3.57□□□□□ -1.84
NEDD4L-217ENST00000587246 MCM9Q9NXL9 1143 aa3.57□□□□□ -1.84
NEDD4L-217ENST00000587246 LRFN1Q9P244 771 aa3.57□□□□□ -1.84
NEDD4L-217ENST00000587246 ADD3Q9UEY8 706 aaKnown RBP3.57□□□□□ -1.84
NEDD4L-217ENST00000587246 ZMYND8Q9ULU4 1186 aaPredicted RBP3.57□□□□□ -1.84
NEDD4L-217ENST00000587246 NFU1Q9UMS0 254 aa3.57□□□□□ -1.84
NEDD4L-217ENST00000587246 MAN2B2Q9Y2E5 1009 aa3.57□□□□□ -1.84
NEDD4L-217ENST00000587246 SIRT4Q9Y6E7 314 aaPredicted RBP3.57□□□□□ -1.84
NEDD4L-217ENST00000587246 ARHGEF17Q96PE2 2063 aaPredicted RBP3.56□□□□□ -1.84
NEDD4L-217ENST00000587246 SPATA31A5Q5VU36 1347 aa3.56□□□□□ -1.84
NEDD4L-217ENST00000587246 SPATA31A7Q8IWB4 1347 aa3.56□□□□□ -1.84
NEDD4L-217ENST00000587246 PI4KAP2A4QPH2 592 aa3.56□□□□□ -1.84
NEDD4L-217ENST00000587246 H0Y626 953 aa3.56□□□□□ -1.84
NEDD4L-217ENST00000587246 H0YC42 278 aa3.56□□□□□ -1.84
NEDD4L-217ENST00000587246 CAPN9O14815 690 aa3.56□□□□□ -1.84
NEDD4L-217ENST00000587246 CTAGE5O15320 804 aa3.56□□□□□ -1.84
NEDD4L-217ENST00000587246 ZSCAN9O15535 394 aaPredicted RBP3.56□□□□□ -1.84
NEDD4L-217ENST00000587246 SOCS5O75159 536 aa3.56□□□□□ -1.84
NEDD4L-217ENST00000587246 SGPL1O95470 568 aa3.56□□□□□ -1.84
NEDD4L-217ENST00000587246 CD63P08962 238 aa3.56□□□□□ -1.84
NEDD4L-217ENST00000587246 PCP11498 1178 aaKnown RBP3.56□□□□□ -1.84
NEDD4L-217ENST00000587246 PORP16435 677 aaPredicted RBP3.56□□□□□ -1.84
NEDD4L-217ENST00000587246 TACR3P29371 465 aa3.56□□□□□ -1.84
NEDD4L-217ENST00000587246 PBLDP30039 288 aaPredicted RBP3.56□□□□□ -1.84
NEDD4L-217ENST00000587246 MMP13P45452 471 aa3.56□□□□□ -1.84
NEDD4L-217ENST00000587246 PLCD1P51178 756 aa3.56□□□□□ -1.84
NEDD4L-217ENST00000587246 ZNF81P51508 661 aa3.56□□□□□ -1.84
NEDD4L-217ENST00000587246 WDR5P61964 334 aaKnown RBP3.56□□□□□ -1.84
NEDD4L-217ENST00000587246 RPS13P62277 151 aaKnown RBP3.56□□□□□ -1.84
NEDD4L-217ENST00000587246 GHRHRQ02643 423 aa3.56□□□□□ -1.84
NEDD4L-217ENST00000587246 DEUP1Q05D60 604 aa3.56□□□□□ -1.84
NEDD4L-217ENST00000587246 SEMA3BQ13214 749 aa3.56□□□□□ -1.84
NEDD4L-217ENST00000587246 FHL3Q13643 280 aa3.56□□□□□ -1.84
NEDD4L-217ENST00000587246 PMS2P11Q13670 270 aa3.56□□□□□ -1.84
NEDD4L-217ENST00000587246 LAMB3Q13751 1172 aa3.56□□□□□ -1.84
NEDD4L-217ENST00000587246 ERV3-1Q14264 604 aa3.56□□□□□ -1.84
NEDD4L-217ENST00000587246 OASLQ15646 514 aaKnown RBP3.56□□□□□ -1.84
NEDD4L-217ENST00000587246 SLC35G1Q2M3R5 365 aa3.56□□□□□ -1.84
NEDD4L-217ENST00000587246 TRIM71Q2Q1W2 868 aaKnown RBP3.56□□□□□ -1.84
NEDD4L-217ENST00000587246 ODF2Q5BJF6 829 aa3.56□□□□□ -1.84
NEDD4L-217ENST00000587246 TTC39AQ5SRH9 613 aa3.56□□□□□ -1.84
NEDD4L-217ENST00000587246 TMTC4Q5T4D3 741 aa3.56□□□□□ -1.84
NEDD4L-217ENST00000587246 PXDC1Q5TGL8 231 aa3.56□□□□□ -1.84
NEDD4L-217ENST00000587246 ZNF425Q6IV72 752 aa3.56□□□□□ -1.84
NEDD4L-217ENST00000587246 C11orf87Q6NUJ2 197 aa3.56□□□□□ -1.84
NEDD4L-217ENST00000587246 JMJD6Q6NYC1 403 aaPredicted RBP3.56□□□□□ -1.84
NEDD4L-217ENST00000587246 FBXO38Q6PIJ6 1188 aa3.56□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms