RNA–Protein interactions for RNA: ENST00000586119.1

LIG3-207, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-207ENST00000586119 OLFML1Q6UWY5 402 aa11.92□□□□□ -0.5
LIG3-207ENST00000586119 ZNF683Q8IZ20 524 aa11.92□□□□□ -0.5
LIG3-207ENST00000586119 TMEM145Q8NBT3 493 aa11.92□□□□□ -0.5
LIG3-207ENST00000586119 OR13H1Q8NG92 308 aa11.92□□□□□ -0.5
LIG3-207ENST00000586119 OR2A12Q8NGT7 310 aa11.92□□□□□ -0.5
LIG3-207ENST00000586119 SLC39A7Q92504 469 aa11.92□□□□□ -0.5
LIG3-207ENST00000586119 NAF1Q96HR8 494 aaKnown RBP11.92□□□□□ -0.5
LIG3-207ENST00000586119 NRSN2Q9GZP1 204 aa11.92□□□□□ -0.5
LIG3-207ENST00000586119 OSBPL2Q9H1P3 480 aa11.92□□□□□ -0.5
LIG3-207ENST00000586119 TNKS2Q9H2K2 1166 aa11.92□□□□□ -0.5
LIG3-207ENST00000586119 KDM4CQ9H3R0 1056 aa11.92□□□□□ -0.5
LIG3-207ENST00000586119 PIGVQ9NUD9 493 aa11.92□□□□□ -0.5
LIG3-207ENST00000586119 MPP6Q9NZW5 540 aa11.92□□□□□ -0.5
LIG3-207ENST00000586119 CLCA2Q9UQC9 943 aa11.92□□□□□ -0.5
LIG3-207ENST00000586119 DMTF1Q9Y222 760 aa11.92□□□□□ -0.5
LIG3-207ENST00000586119 RP1P56715 2156 aa11.92□□□□□ -0.5
LIG3-207ENST00000586119 BICDL2A1A5D9 508 aa11.91□□□□□ -0.5
LIG3-207ENST00000586119 C1QTNF3-AMACRE9PGA6 284 aa11.91□□□□□ -0.5
LIG3-207ENST00000586119 KPNA3O00505 521 aaPredicted RBP11.91□□□□□ -0.5
LIG3-207ENST00000586119 CASC3O15234 703 aaKnown RBP11.91□□□□□ -0.5
LIG3-207ENST00000586119 HSF2BPO75031 334 aa11.91□□□□□ -0.5
LIG3-207ENST00000586119 GNA14O95837 355 aa11.91□□□□□ -0.5
LIG3-207ENST00000586119 MBD3O95983 291 aa11.91□□□□□ -0.5
LIG3-207ENST00000586119 CLCN1P35523 988 aa11.91□□□□□ -0.5
LIG3-207ENST00000586119 SLC6A3Q01959 620 aa11.91□□□□□ -0.5
LIG3-207ENST00000586119 KCNMA1Q12791 1236 aa11.91□□□□□ -0.5
LIG3-207ENST00000586119 PAK1Q13153 545 aa11.91□□□□□ -0.5
LIG3-207ENST00000586119 FGL2Q14314 439 aa11.91□□□□□ -0.5
LIG3-207ENST00000586119 C5orf22Q49AR2 442 aa11.91□□□□□ -0.5
LIG3-207ENST00000586119 ARSIQ5FYB1 569 aa11.91□□□□□ -0.5
LIG3-207ENST00000586119 EFHC1Q5JVL4 640 aa11.91□□□□□ -0.5
LIG3-207ENST00000586119 PCSK4Q6UW60 755 aa11.91□□□□□ -0.5
LIG3-207ENST00000586119 LRRC69Q6ZNQ3 347 aa11.91□□□□□ -0.5
LIG3-207ENST00000586119 C11orf57Q6ZUT1 292 aaPredicted RBP11.91□□□□□ -0.5
LIG3-207ENST00000586119 SLC47A2Q86VL8 602 aa11.91□□□□□ -0.5
LIG3-207ENST00000586119 IQCHQ86VS3 1027 aa11.91□□□□□ -0.5
LIG3-207ENST00000586119 IRF2BP1Q8IU81 584 aa11.91□□□□□ -0.5
LIG3-207ENST00000586119 SLC22A18ASQ8N1D0 253 aa11.91□□□□□ -0.5
LIG3-207ENST00000586119 OXR1Q8N573 874 aa11.91□□□□□ -0.5
LIG3-207ENST00000586119 DCBLD1Q8N8Z6 715 aa11.91□□□□□ -0.5
LIG3-207ENST00000586119 ATP11CQ8NB49 1132 aa11.91□□□□□ -0.5
LIG3-207ENST00000586119 OR7D4Q8NG98 312 aa11.91□□□□□ -0.5
LIG3-207ENST00000586119 RFFLQ8WZ73 363 aa11.91□□□□□ -0.5
LIG3-207ENST00000586119 FGF11Q92914 225 aa11.91□□□□□ -0.5
LIG3-207ENST00000586119 UBL7Q96S82 380 aaPredicted RBP11.91□□□□□ -0.5
LIG3-207ENST00000586119 TRIM62Q9BVG3 475 aa11.91□□□□□ -0.5
LIG3-207ENST00000586119 CALN1Q9BXU9 219 aa11.91□□□□□ -0.5
LIG3-207ENST00000586119 TKTL2Q9H0I9 626 aa11.91□□□□□ -0.5
LIG3-207ENST00000586119 MUC3BQ9H195 1237 aa11.91□□□□□ -0.5
LIG3-207ENST00000586119 SIX2Q9NPC8 291 aa11.91□□□□□ -0.5
LIG3-207ENST00000586119 VPS51Q9UID3 782 aa11.91□□□□□ -0.5
LIG3-207ENST00000586119 TBC1D30Q9Y2I9 924 aa11.91□□□□□ -0.5
LIG3-207ENST00000586119 LY6G6EA0A0G2JKS1 128 aa11.9□□□□□ -0.5
LIG3-207ENST00000586119 FOXN3O00409 490 aaPredicted RBP11.9□□□□□ -0.5
LIG3-207ENST00000586119 RAD51BO15315 384 aa11.9□□□□□ -0.5
LIG3-207ENST00000586119 ZNF821O75541 412 aaPredicted RBP11.9□□□□□ -0.5
LIG3-207ENST00000586119 PIAS2O75928 621 aa11.9□□□□□ -0.5
LIG3-207ENST00000586119 NEBLO76041 1014 aa11.9□□□□□ -0.5
LIG3-207ENST00000586119 RHOCP08134 193 aa11.9□□□□□ -0.5
LIG3-207ENST00000586119 GLI1P08151 1106 aa11.9□□□□□ -0.5
LIG3-207ENST00000586119 SLC2A3P11169 496 aa11.9□□□□□ -0.5
LIG3-207ENST00000586119 CDK4P11802 303 aa11.9□□□□□ -0.5
LIG3-207ENST00000586119 PON1P27169 355 aa11.9□□□□□ -0.5
LIG3-207ENST00000586119 NOS2P35228 1153 aa11.9□□□□□ -0.5
LIG3-207ENST00000586119 PPP1R2P41236 205 aa11.9□□□□□ -0.5
LIG3-207ENST00000586119 CDH4P55283 916 aa11.9□□□□□ -0.5
LIG3-207ENST00000586119 DAB2P98082 770 aa11.9□□□□□ -0.5
LIG3-207ENST00000586119 ZNF211Q13398 564 aaPredicted RBP11.9□□□□□ -0.5
LIG3-207ENST00000586119 ILKQ13418 452 aa11.9□□□□□ -0.5
LIG3-207ENST00000586119 MEA1Q16626 185 aa11.9□□□□□ -0.5
LIG3-207ENST00000586119 SETMARQ53H47 684 aaPredicted RBP11.9□□□□□ -0.5
LIG3-207ENST00000586119 RAB6CQ53S08 254 aa11.9□□□□□ -0.5
LIG3-207ENST00000586119 C2CD6Q53TS8 623 aa11.9□□□□□ -0.5
LIG3-207ENST00000586119 TTC39BQ5VTQ0 682 aaPredicted RBP11.9□□□□□ -0.5
LIG3-207ENST00000586119 TRNP1Q6NT89 227 aa11.9□□□□□ -0.5
LIG3-207ENST00000586119 FOXR2Q6PJQ5 311 aa11.9□□□□□ -0.5
LIG3-207ENST00000586119 GCNT7Q6ZNI0 430 aa11.9□□□□□ -0.5
LIG3-207ENST00000586119 TFAP2DQ7Z6R9 452 aa11.9□□□□□ -0.5
LIG3-207ENST00000586119 DSG4Q86SJ6 1040 aa11.9□□□□□ -0.5
LIG3-207ENST00000586119 HORMAD1Q86X24 394 aa11.9□□□□□ -0.5
LIG3-207ENST00000586119 ERICH1Q86X53 443 aa11.9□□□□□ -0.5
LIG3-207ENST00000586119 SHC3Q92529 594 aa11.9□□□□□ -0.5
LIG3-207ENST00000586119 BMFQ96LC9 184 aa11.9□□□□□ -0.5
LIG3-207ENST00000586119 FCRL3Q96P31 734 aaPredicted RBP11.9□□□□□ -0.5
LIG3-207ENST00000586119 NPY6RQ99463 290 aa11.9□□□□□ -0.5
LIG3-207ENST00000586119 RAB6CQ9H0N0 254 aa11.9□□□□□ -0.5
LIG3-207ENST00000586119 WDCPQ9H6R7 721 aa11.9□□□□□ -0.5
LIG3-207ENST00000586119 PREBQ9HCU5 417 aa11.9□□□□□ -0.5
LIG3-207ENST00000586119 KLHL11Q9NVR0 708 aa11.9□□□□□ -0.5
LIG3-207ENST00000586119 ASNSD1Q9NWL6 643 aa11.9□□□□□ -0.5
LIG3-207ENST00000586119 ARHGEF38Q9NXL2 777 aa11.9□□□□□ -0.5
LIG3-207ENST00000586119 PCDHGC3Q9UN70 934 aa11.9□□□□□ -0.5
LIG3-207ENST00000586119 HS3ST2Q9Y278 367 aa11.9□□□□□ -0.5
LIG3-207ENST00000586119 U3KQA8 63 aa11.9□□□□□ -0.5
LIG3-207ENST00000586119 MGAQ8IWI9 3026 aa11.9□□□□□ -0.5
LIG3-207ENST00000586119 POM121BA6NF01 834 aa11.89□□□□□ -0.51
LIG3-207ENST00000586119 ATXN7O15265 892 aaPredicted RBP11.89□□□□□ -0.51
LIG3-207ENST00000586119 ALOX15BO15296 676 aa11.89□□□□□ -0.51
LIG3-207ENST00000586119 RRP8O43159 456 aaKnown RBP11.89□□□□□ -0.51
LIG3-207ENST00000586119 CLDN11O75508 207 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms