RNA–Protein interactions for RNA: ENST00000584992.1

RIOK3-211, Transcript of RIO kinase 3, humanhuman

TSL 3

Gene RIOK3, Length 396 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIOK3-211ENST00000584992 C9orf78Q9NZ63 289 aaPredicted RBP4.31□□□□□ -1.72
RIOK3-211ENST00000584992 IFT80Q9P2H3 777 aaPredicted RBP4.31□□□□□ -1.72
RIOK3-211ENST00000584992 HDAC6Q9UBN7 1215 aa4.31□□□□□ -1.72
RIOK3-211ENST00000584992 CDH22Q9UJ99 828 aa4.31□□□□□ -1.72
RIOK3-211ENST00000584992 TRBV5-7A0A0A0MS05 114 aa4.3□□□□□ -1.72
RIOK3-211ENST00000584992 TMEM272A0A1B0GTI8 110 aa4.3□□□□□ -1.72
RIOK3-211ENST00000584992 OR6C68A6NDL8 312 aa4.3□□□□□ -1.72
RIOK3-211ENST00000584992 TMCC1O94876 653 aa4.3□□□□□ -1.72
RIOK3-211ENST00000584992 AGR2O95994 175 aa4.3□□□□□ -1.72
RIOK3-211ENST00000584992 TMEM191BP0C7N4 346 aa4.3□□□□□ -1.72
RIOK3-211ENST00000584992 PGM1P36871 562 aa4.3□□□□□ -1.72
RIOK3-211ENST00000584992 TMPRSS3P57727 454 aa4.3□□□□□ -1.72
RIOK3-211ENST00000584992 KHDRBS1Q07666 443 aaKnown RBP eCLIP4.3□□□□□ -1.72
RIOK3-211ENST00000584992 SRSF1Q07955 248 aaKnown RBP eCLIP4.3□□□□□ -1.72
RIOK3-211ENST00000584992 TBL3Q12788 808 aaKnown RBP4.3□□□□□ -1.72
RIOK3-211ENST00000584992 NFIL3Q16649 462 aa4.3□□□□□ -1.72
RIOK3-211ENST00000584992 FBXO43Q4G163 708 aa4.3□□□□□ -1.72
RIOK3-211ENST00000584992 NUGGCQ68CJ6 796 aa4.3□□□□□ -1.72
RIOK3-211ENST00000584992 ZNF425Q6IV72 752 aa4.3□□□□□ -1.72
RIOK3-211ENST00000584992 GJB7Q6PEY0 223 aa4.3□□□□□ -1.72
RIOK3-211ENST00000584992 GPSM1Q86YR5 675 aa4.3□□□□□ -1.72
RIOK3-211ENST00000584992 FAM185AQ8N0U4 392 aa4.3□□□□□ -1.72
RIOK3-211ENST00000584992 MMP21Q8N119 569 aa4.3□□□□□ -1.72
RIOK3-211ENST00000584992 LRRC57Q8N9N7 239 aa4.3□□□□□ -1.72
RIOK3-211ENST00000584992 SETD9Q8NE22 299 aa4.3□□□□□ -1.72
RIOK3-211ENST00000584992 MPLKIPQ8TAP9 179 aa4.3□□□□□ -1.72
RIOK3-211ENST00000584992 TMEM174Q8WUU8 243 aa4.3□□□□□ -1.72
RIOK3-211ENST00000584992 SH3KBP1Q96B97 665 aa4.3□□□□□ -1.72
RIOK3-211ENST00000584992 HVCN1Q96D96 273 aa4.3□□□□□ -1.72
RIOK3-211ENST00000584992 TEFMQ96QE5 360 aaKnown RBP4.3□□□□□ -1.72
RIOK3-211ENST00000584992 CD180Q99467 661 aa4.3□□□□□ -1.72
RIOK3-211ENST00000584992 TMEM79Q9BSE2 394 aa4.3□□□□□ -1.72
RIOK3-211ENST00000584992 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP4.3□□□□□ -1.72
RIOK3-211ENST00000584992 C1QTNF7Q9BXJ2 289 aa4.3□□□□□ -1.72
RIOK3-211ENST00000584992 CXorf56Q9H5V9 222 aa4.3□□□□□ -1.72
RIOK3-211ENST00000584992 SEMA4BQ9NPR2 832 aaPredicted RBP4.3□□□□□ -1.72
RIOK3-211ENST00000584992 ZDHHC7Q9NXF8 308 aa4.3□□□□□ -1.72
RIOK3-211ENST00000584992 NLKQ9UBE8 527 aa4.3□□□□□ -1.72
RIOK3-211ENST00000584992 PLEKHB1Q9UF11 243 aaPredicted RBP4.3□□□□□ -1.72
RIOK3-211ENST00000584992 PCDHA12Q9UN75 941 aa4.3□□□□□ -1.72
RIOK3-211ENST00000584992 OSGIN2Q9Y236 505 aa4.3□□□□□ -1.72
RIOK3-211ENST00000584992 CRYL1Q9Y2S2 319 aa4.3□□□□□ -1.72
RIOK3-211ENST00000584992 RAP2CQ9Y3L5 183 aa4.3□□□□□ -1.72
RIOK3-211ENST00000584992 LY6G6EA0A0G2JKS1 128 aa4.29□□□□□ -1.72
RIOK3-211ENST00000584992 FAM90A7PA6NKC0 464 aa4.29□□□□□ -1.72
RIOK3-211ENST00000584992 FAM90A22PA8MWA6 464 aa4.29□□□□□ -1.72
RIOK3-211ENST00000584992 FAM90A12PA8MX19 464 aa4.29□□□□□ -1.72
RIOK3-211ENST00000584992 FAM90A23PA8MXZ1 464 aa4.29□□□□□ -1.72
RIOK3-211ENST00000584992 ATG13O75143 517 aa4.29□□□□□ -1.72
RIOK3-211ENST00000584992 SYF2O95926 243 aaKnown RBP4.29□□□□□ -1.72
RIOK3-211ENST00000584992 IL1AP01583 271 aa4.29□□□□□ -1.72
RIOK3-211ENST00000584992 HNRNPA1P09651 372 aaKnown RBP eCLIP4.29□□□□□ -1.72
RIOK3-211ENST00000584992 IFIT1P09914 478 aaKnown RBP4.29□□□□□ -1.72
RIOK3-211ENST00000584992 XBP1P17861 261 aa4.29□□□□□ -1.72
RIOK3-211ENST00000584992 TNFSF8P32971 234 aa4.29□□□□□ -1.72
RIOK3-211ENST00000584992 PTGER1P34995 402 aa4.29□□□□□ -1.72
RIOK3-211ENST00000584992 ALDH7A1P49419 539 aaKnown RBP4.29□□□□□ -1.72
RIOK3-211ENST00000584992 MAPK7Q13164 816 aa4.29□□□□□ -1.72
RIOK3-211ENST00000584992 SLC18A3Q16572 532 aa4.29□□□□□ -1.72
RIOK3-211ENST00000584992 SYTL3Q4VX76 610 aa4.29□□□□□ -1.72
RIOK3-211ENST00000584992 ALFQ53S48 1182 aa4.29□□□□□ -1.72
RIOK3-211ENST00000584992 UBAP2Q5T6F2 1119 aaKnown RBP4.29□□□□□ -1.72
RIOK3-211ENST00000584992 ASPHD1Q5U4P2 390 aa4.29□□□□□ -1.72
RIOK3-211ENST00000584992 RETSATQ6NUM9 610 aa4.29□□□□□ -1.72
RIOK3-211ENST00000584992 SLC22A25Q6T423 547 aa4.29□□□□□ -1.72
RIOK3-211ENST00000584992 C1QL2Q7Z5L3 287 aa4.29□□□□□ -1.72
RIOK3-211ENST00000584992 ADGRG6Q86SQ4 1221 aa4.29□□□□□ -1.72
RIOK3-211ENST00000584992 WDR5BQ86VZ2 330 aa4.29□□□□□ -1.72
RIOK3-211ENST00000584992 TMTC1Q8IUR5 882 aa4.29□□□□□ -1.72
RIOK3-211ENST00000584992 FAM217AQ8IXS0 508 aa4.29□□□□□ -1.72
RIOK3-211ENST00000584992 TMEM199Q8N511 208 aa4.29□□□□□ -1.72
RIOK3-211ENST00000584992 ESX1Q8N693 406 aa4.29□□□□□ -1.72
RIOK3-211ENST00000584992 DNAAF1Q8NEP3 725 aa4.29□□□□□ -1.72
RIOK3-211ENST00000584992 HSPH1Q92598 858 aa4.29□□□□□ -1.72
RIOK3-211ENST00000584992 CNOT9Q92600 299 aaKnown RBP4.29□□□□□ -1.72
RIOK3-211ENST00000584992 HTRA1Q92743 480 aa4.29□□□□□ -1.72
RIOK3-211ENST00000584992 SLC25A28Q96A46 364 aa4.29□□□□□ -1.72
RIOK3-211ENST00000584992 NLRP4Q96MN2 994 aa4.29□□□□□ -1.72
RIOK3-211ENST00000584992 PHF7Q9BWX1 381 aaPredicted RBP4.29□□□□□ -1.72
RIOK3-211ENST00000584992 LMAN2LQ9H0V9 348 aa4.29□□□□□ -1.72
RIOK3-211ENST00000584992 RNF146Q9NTX7 359 aa4.29□□□□□ -1.72
RIOK3-211ENST00000584992 POT1Q9NUX5 634 aa4.29□□□□□ -1.72
RIOK3-211ENST00000584992 PDP2Q9P2J9 529 aa4.29□□□□□ -1.72
RIOK3-211ENST00000584992 PCSK5Q92824 1860 aa4.28□□□□□ -1.72
RIOK3-211ENST00000584992 IGLV5-39A0A0G2JS06 123 aa4.28□□□□□ -1.72
RIOK3-211ENST00000584992 C11orf97A0A1B0GVM6 126 aaPredicted RBP4.28□□□□□ -1.72
RIOK3-211ENST00000584992 DDTLA6NHG4 134 aaPredicted RBP4.28□□□□□ -1.72
RIOK3-211ENST00000584992 EYA2O00167 538 aa4.28□□□□□ -1.72
RIOK3-211ENST00000584992 PER2O15055 1255 aa4.28□□□□□ -1.72
RIOK3-211ENST00000584992 HOXC11O43248 304 aaPredicted RBP4.28□□□□□ -1.72
RIOK3-211ENST00000584992 TULP3O75386 442 aa4.28□□□□□ -1.72
RIOK3-211ENST00000584992 EPN2O95208 641 aa4.28□□□□□ -1.72
RIOK3-211ENST00000584992 UNGP13051 313 aaPredicted RBP4.28□□□□□ -1.72
RIOK3-211ENST00000584992 PSMC2P35998 433 aaKnown RBP4.28□□□□□ -1.72
RIOK3-211ENST00000584992 CLCNKBP51801 687 aa4.28□□□□□ -1.72
RIOK3-211ENST00000584992 VAMP2P63027 116 aa4.28□□□□□ -1.72
RIOK3-211ENST00000584992 PTGR1Q14914 329 aa4.28□□□□□ -1.72
RIOK3-211ENST00000584992 PRTGQ2VWP7 1150 aa4.28□□□□□ -1.72
RIOK3-211ENST00000584992 LVRNQ6Q4G3 990 aa4.28□□□□□ -1.72
RIOK3-211ENST00000584992 COLCA1Q6ZS62 124 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms