RNA–Protein interactions for RNA: ENST00000584760.1

SREBF1-223, Transcript of sterol regulatory element binding transcription factor 1, human

TSL 2

Gene SREBF1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SREBF1-223	ENST00000584760	CNPY3	Q9BT09	278 aa		13.64	□□□□□ -0.23
SREBF1-223	ENST00000584760	C2orf49	Q9BVC5	232 aa	Predicted RBP	13.64	□□□□□ -0.23
SREBF1-223	ENST00000584760	IFNK	Q9P0W0	207 aa		13.64	□□□□□ -0.23
SREBF1-223	ENST00000584760	PCDHB9	Q9Y5E1	797 aa		13.64	□□□□□ -0.23
SREBF1-223	ENST00000584760	ILVBL	A1L0T0	632 aa		13.63	□□□□□ -0.23
SREBF1-223	ENST00000584760	ANKRD62	A6NC57	917 aa		13.63	□□□□□ -0.23
SREBF1-223	ENST00000584760	RNASEH1	O60930	286 aa	Known RBP	13.63	□□□□□ -0.23
SREBF1-223	ENST00000584760	LRIG2	O94898	1065 aa		13.63	□□□□□ -0.23
SREBF1-223	ENST00000584760	SEMA4F	O95754	770 aa		13.63	□□□□□ -0.23
SREBF1-223	ENST00000584760	MT-CO1	P00395	513 aa		13.63	□□□□□ -0.23
SREBF1-223	ENST00000584760	GYPC	P04921	128 aa		13.63	□□□□□ -0.23
SREBF1-223	ENST00000584760	SYP	P08247	313 aa		13.63	□□□□□ -0.23
SREBF1-223	ENST00000584760	SKIL	P12757	684 aa		13.63	□□□□□ -0.23
SREBF1-223	ENST00000584760	SRC	P12931	536 aa		13.63	□□□□□ -0.23
SREBF1-223	ENST00000584760	GLDC	P23378	1020 aa		13.63	□□□□□ -0.23
SREBF1-223	ENST00000584760	MAOB	P27338	520 aa		13.63	□□□□□ -0.23
SREBF1-223	ENST00000584760	PSMD8	P48556	350 aa		13.63	□□□□□ -0.23
SREBF1-223	ENST00000584760	HNRNPD	Q14103	355 aa	Known RBP	13.63	□□□□□ -0.23
SREBF1-223	ENST00000584760	COL28A1	Q2UY09	1125 aa		13.63	□□□□□ -0.23
SREBF1-223	ENST00000584760	SOWAHC	Q53LP3	525 aa	Predicted RBP	13.63	□□□□□ -0.23
SREBF1-223	ENST00000584760	WDR45B	Q5MNZ6	344 aa		13.63	□□□□□ -0.23
SREBF1-223	ENST00000584760	DCAF12L1	Q5VU92	463 aa		13.63	□□□□□ -0.23
SREBF1-223	ENST00000584760	DCUN1D2	Q6PH85	259 aa		13.63	□□□□□ -0.23
SREBF1-223	ENST00000584760		Q6ZVU0	165 aa		13.63	□□□□□ -0.23
SREBF1-223	ENST00000584760	PDZD3	Q86UT5	571 aa		13.63	□□□□□ -0.23
SREBF1-223	ENST00000584760	RGL4	Q8IZJ4	473 aa		13.63	□□□□□ -0.23
SREBF1-223	ENST00000584760	AADAT	Q8N5Z0	425 aa		13.63	□□□□□ -0.23
SREBF1-223	ENST00000584760	OR7D4	Q8NG98	312 aa		13.63	□□□□□ -0.23
SREBF1-223	ENST00000584760	SYN2	Q92777	582 aa	Predicted RBP	13.63	□□□□□ -0.23
SREBF1-223	ENST00000584760	MAGEB5	Q9BZ81	275 aa		13.63	□□□□□ -0.23
SREBF1-223	ENST00000584760	BTBD1	Q9H0C5	482 aa		13.63	□□□□□ -0.23
SREBF1-223	ENST00000584760	C6orf106	Q9H6K1	298 aa	Predicted RBP	13.63	□□□□□ -0.23
SREBF1-223	ENST00000584760	PARVA	Q9NVD7	372 aa		13.63	□□□□□ -0.23
SREBF1-223	ENST00000584760	SUSD2	Q9UGT4	822 aa		13.63	□□□□□ -0.23
SREBF1-223	ENST00000584760	ADAMTS1	Q9UHI8	967 aa		13.63	□□□□□ -0.23
SREBF1-223	ENST00000584760	FZD4	Q9ULV1	537 aa		13.63	□□□□□ -0.23
SREBF1-223	ENST00000584760	ZBTB32	Q9Y2Y4	487 aa	Predicted RBP	13.63	□□□□□ -0.23
SREBF1-223	ENST00000584760	DOCK9	Q9BZ29	2069 aa		13.62	□□□□□ -0.23
SREBF1-223	ENST00000584760		A0A1W2PP55	124 aa		13.62	□□□□□ -0.23
SREBF1-223	ENST00000584760	C10orf142	B7Z368	130 aa		13.62	□□□□□ -0.23
SREBF1-223	ENST00000584760	ADH1B	P00325	375 aa		13.62	□□□□□ -0.23
SREBF1-223	ENST00000584760	FTL	P02792	175 aa	Predicted RBP	13.62	□□□□□ -0.23
SREBF1-223	ENST00000584760	PLEK	P08567	350 aa	Predicted RBP	13.62	□□□□□ -0.23
SREBF1-223	ENST00000584760	RHOQ	P17081	205 aa		13.62	□□□□□ -0.23
SREBF1-223	ENST00000584760	L1CAM	P32004	1257 aa		13.62	□□□□□ -0.23
SREBF1-223	ENST00000584760	MAPKAPK2	P49137	400 aa		13.62	□□□□□ -0.23
SREBF1-223	ENST00000584760	METAP1	P53582	386 aa		13.62	□□□□□ -0.23
SREBF1-223	ENST00000584760	AIF1	P55008	147 aa		13.62	□□□□□ -0.23
SREBF1-223	ENST00000584760	KRT83	P78385	493 aa		13.62	□□□□□ -0.23
SREBF1-223	ENST00000584760	ARF5	P84085	180 aa		13.62	□□□□□ -0.23
SREBF1-223	ENST00000584760	GNA12	Q03113	381 aa		13.62	□□□□□ -0.23
SREBF1-223	ENST00000584760	DLG2	Q15700	870 aa		13.62	□□□□□ -0.23
SREBF1-223	ENST00000584760	TMC6	Q7Z403	805 aa		13.62	□□□□□ -0.23
SREBF1-223	ENST00000584760	SLFN11	Q7Z7L1	901 aa		13.62	□□□□□ -0.23
SREBF1-223	ENST00000584760	DRC7	Q8IY82	874 aa		13.62	□□□□□ -0.23
SREBF1-223	ENST00000584760	ZCCHC9	Q8N567	271 aa	Known RBP	13.62	□□□□□ -0.23
SREBF1-223	ENST00000584760	C1orf216	Q8TAB5	229 aa		13.62	□□□□□ -0.23
SREBF1-223	ENST00000584760	FAM131C	Q96AQ9	280 aa		13.62	□□□□□ -0.23
SREBF1-223	ENST00000584760	TBC1D31	Q96DN5	1066 aa		13.62	□□□□□ -0.23
SREBF1-223	ENST00000584760	IQCD	Q96DY2	449 aa		13.62	□□□□□ -0.23
SREBF1-223	ENST00000584760	XPO4	Q9C0E2	1151 aa	Known RBP	13.62	□□□□□ -0.23
SREBF1-223	ENST00000584760	CCDC86	Q9H6F5	360 aa	Known RBP	13.62	□□□□□ -0.23
SREBF1-223	ENST00000584760	RETREG1	Q9H6L5	497 aa		13.62	□□□□□ -0.23
SREBF1-223	ENST00000584760	SGK2	Q9HBY8	427 aa		13.62	□□□□□ -0.23
SREBF1-223	ENST00000584760	NDFIP2	Q9NV92	336 aa		13.62	□□□□□ -0.23
SREBF1-223	ENST00000584760	DNAAF2	Q9NVR5	837 aa	Known RBP	13.62	□□□□□ -0.23
SREBF1-223	ENST00000584760	TMEM248	Q9NWD8	314 aa		13.62	□□□□□ -0.23
SREBF1-223	ENST00000584760	FBXL12	Q9NXK8	326 aa		13.62	□□□□□ -0.23
SREBF1-223	ENST00000584760	CAPN11	Q9UMQ6	739 aa		13.62	□□□□□ -0.23
SREBF1-223	ENST00000584760	SLCO1B1	Q9Y6L6	691 aa		13.62	□□□□□ -0.23
SREBF1-223	ENST00000584760	DSP	P15924	2871 aa	Known RBP	13.62	□□□□□ -0.23
SREBF1-223	ENST00000584760	PCNX2	A6NKB5	2137 aa		13.61	□□□□□ -0.23
SREBF1-223	ENST00000584760		A0A1B0GTW7	788 aa		13.61	□□□□□ -0.23
SREBF1-223	ENST00000584760		K7ERQ8	282 aa		13.61	□□□□□ -0.23
SREBF1-223	ENST00000584760	ALOX15B	O15296	676 aa		13.61	□□□□□ -0.23
SREBF1-223	ENST00000584760	RTN2	O75298	545 aa		13.61	□□□□□ -0.23
SREBF1-223	ENST00000584760	ZMPSTE24	O75844	475 aa		13.61	□□□□□ -0.23
SREBF1-223	ENST00000584760	IL1B	P01584	269 aa		13.61	□□□□□ -0.23
SREBF1-223	ENST00000584760	FTH1P19	P0C7X4	201 aa		13.61	□□□□□ -0.23
SREBF1-223	ENST00000584760	GNS	P15586	552 aa		13.61	□□□□□ -0.23
SREBF1-223	ENST00000584760	C5AR1	P21730	350 aa		13.61	□□□□□ -0.23
SREBF1-223	ENST00000584760	SLC8A1	P32418	973 aa		13.61	□□□□□ -0.23
SREBF1-223	ENST00000584760	DRD3	P35462	400 aa		13.61	□□□□□ -0.23
SREBF1-223	ENST00000584760	CLCN6	P51797	869 aa		13.61	□□□□□ -0.23
SREBF1-223	ENST00000584760	ADPRH	P54922	357 aa		13.61	□□□□□ -0.23
SREBF1-223	ENST00000584760	ZBED6	P86452	979 aa		13.61	□□□□□ -0.23
SREBF1-223	ENST00000584760	SLC14A1	Q13336	389 aa		13.61	□□□□□ -0.23
SREBF1-223	ENST00000584760	ACCSL	Q4AC99	568 aa		13.61	□□□□□ -0.23
SREBF1-223	ENST00000584760	TDRD12	Q587J7	1177 aa	Known RBP	13.61	□□□□□ -0.23
SREBF1-223	ENST00000584760	EFHC2	Q5JST6	749 aa		13.61	□□□□□ -0.23
SREBF1-223	ENST00000584760	RWDD4	Q6NW29	188 aa	Known RBP	13.61	□□□□□ -0.23
SREBF1-223	ENST00000584760	C22orf39	Q6P5X5	142 aa		13.61	□□□□□ -0.23
SREBF1-223	ENST00000584760	LINGO4	Q6UY18	593 aa		13.61	□□□□□ -0.23
SREBF1-223	ENST00000584760	PYROXD2	Q8N2H3	581 aa		13.61	□□□□□ -0.23
SREBF1-223	ENST00000584760	ATP11C	Q8NB49	1132 aa		13.61	□□□□□ -0.23
SREBF1-223	ENST00000584760	FNIP1	Q8TF40	1166 aa		13.61	□□□□□ -0.23
SREBF1-223	ENST00000584760	HNRNPLL	Q8WVV9	542 aa	Known RBP	13.61	□□□□□ -0.23
SREBF1-223	ENST00000584760	ADAMTS14	Q8WXS8	1223 aa		13.61	□□□□□ -0.23
SREBF1-223	ENST00000584760	OR8D1	Q8WZ84	308 aa		13.61	□□□□□ -0.23
SREBF1-223	ENST00000584760	BIRC7	Q96CA5	298 aa		13.61	□□□□□ -0.23

Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms