RNA–Protein interactions for RNA: ENST00000584112.1

CCDC47-206, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2

Gene CCDC47, Length 588 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-206ENST00000584112 ZNF776Q68DI1 518 aaPredicted RBP11.47□□□□□ -0.57
CCDC47-206ENST00000584112 LAYNQ6UX15 382 aa11.47□□□□□ -0.57
CCDC47-206ENST00000584112 C11orf57Q6ZUT1 292 aaPredicted RBP11.47□□□□□ -0.57
CCDC47-206ENST00000584112 FAM124AQ86V42 546 aa11.47□□□□□ -0.57
CCDC47-206ENST00000584112 GATAD2AQ86YP4 633 aa11.47□□□□□ -0.57
CCDC47-206ENST00000584112 ZDHHC17Q8IUH5 632 aa11.47□□□□□ -0.57
CCDC47-206ENST00000584112 DEFB106AQ8N104 65 aa11.47□□□□□ -0.57
CCDC47-206ENST00000584112 CFAP52Q8N1V2 620 aa11.47□□□□□ -0.57
CCDC47-206ENST00000584112 WDTC1Q8N5D0 677 aa11.47□□□□□ -0.57
CCDC47-206ENST00000584112 C1orf131Q8NDD1 294 aaKnown RBP11.47□□□□□ -0.57
CCDC47-206ENST00000584112 RNF34Q969K3 372 aa11.47□□□□□ -0.57
CCDC47-206ENST00000584112 SLC2A13Q96QE2 648 aa11.47□□□□□ -0.57
CCDC47-206ENST00000584112 PPP1R9BQ96SB3 815 aa11.47□□□□□ -0.57
CCDC47-206ENST00000584112 PDCL3Q9H2J4 239 aa11.47□□□□□ -0.57
CCDC47-206ENST00000584112 PRSS16Q9NQE7 514 aa11.47□□□□□ -0.57
CCDC47-206ENST00000584112 DDIT4Q9NX09 232 aa11.47□□□□□ -0.57
CCDC47-206ENST00000584112 SCML1Q9UN30 329 aa11.47□□□□□ -0.57
CCDC47-206ENST00000584112 CLCA2Q9UQC9 943 aa11.47□□□□□ -0.57
CCDC47-206ENST00000584112 ARID1BQ8NFD5 2236 aaPredicted RBP11.46□□□□□ -0.57
CCDC47-206ENST00000584112 A0A1B0GVM2 712 aa11.46□□□□□ -0.57
CCDC47-206ENST00000584112 TCAF2A6NFQ2 919 aa11.46□□□□□ -0.57
CCDC47-206ENST00000584112 H0Y8X5 98 aa11.46□□□□□ -0.57
CCDC47-206ENST00000584112 DAB1O75553 588 aa11.46□□□□□ -0.57
CCDC47-206ENST00000584112 AGFG2O95081 481 aa11.46□□□□□ -0.57
CCDC47-206ENST00000584112 LDOC1O95751 146 aaPredicted RBP11.46□□□□□ -0.57
CCDC47-206ENST00000584112 EEF1GP26641 437 aaKnown RBP11.46□□□□□ -0.57
CCDC47-206ENST00000584112 CLCN1P35523 988 aa11.46□□□□□ -0.57
CCDC47-206ENST00000584112 NNMTP40261 264 aa11.46□□□□□ -0.57
CCDC47-206ENST00000584112 RPS14P62263 151 aaKnown RBP11.46□□□□□ -0.57
CCDC47-206ENST00000584112 EIF4EBP2Q13542 120 aaPredicted RBP11.46□□□□□ -0.57
CCDC47-206ENST00000584112 RAPGEF1Q13905 1077 aa11.46□□□□□ -0.57
CCDC47-206ENST00000584112 KCNJ12Q14500 433 aa11.46□□□□□ -0.57
CCDC47-206ENST00000584112 ARID5BQ14865 1188 aa11.46□□□□□ -0.57
CCDC47-206ENST00000584112 TAF5Q15542 800 aa11.46□□□□□ -0.57
CCDC47-206ENST00000584112 HNRNPA1L2Q32P51 320 aaKnown RBP11.46□□□□□ -0.57
CCDC47-206ENST00000584112 PITRM1Q5JRX3 1037 aa11.46□□□□□ -0.57
CCDC47-206ENST00000584112 MIIPQ5JXC2 388 aa11.46□□□□□ -0.57
CCDC47-206ENST00000584112 OR6B2Q6IFH4 312 aa11.46□□□□□ -0.57
CCDC47-206ENST00000584112 CLEC17AQ6ZS10 378 aa11.46□□□□□ -0.57
CCDC47-206ENST00000584112 FAM183BPQ6ZVS7 135 aa11.46□□□□□ -0.57
CCDC47-206ENST00000584112 SLC26A9Q7LBE3 791 aa11.46□□□□□ -0.57
CCDC47-206ENST00000584112 SLC47A2Q86VL8 602 aa11.46□□□□□ -0.57
CCDC47-206ENST00000584112 FAM71AQ8IYT1 594 aa11.46□□□□□ -0.57
CCDC47-206ENST00000584112 DCBLD1Q8N8Z6 715 aa11.46□□□□□ -0.57
CCDC47-206ENST00000584112 MYEOVQ96EZ4 313 aa11.46□□□□□ -0.57
CCDC47-206ENST00000584112 SEMA3CQ99985 751 aa11.46□□□□□ -0.57
CCDC47-206ENST00000584112 BTBD1Q9H0C5 482 aa11.46□□□□□ -0.57
CCDC47-206ENST00000584112 RSPH9Q9H1X1 276 aaPredicted RBP11.46□□□□□ -0.57
CCDC47-206ENST00000584112 SGK2Q9HBY8 427 aa11.46□□□□□ -0.57
CCDC47-206ENST00000584112 ASCL3Q9NQ33 180 aa11.46□□□□□ -0.57
CCDC47-206ENST00000584112 TMEM51Q9NW97 253 aa11.46□□□□□ -0.57
CCDC47-206ENST00000584112 RRN3Q9NYV6 651 aa11.46□□□□□ -0.57
CCDC47-206ENST00000584112 XPO7Q9UIA9 1087 aaKnown RBP11.46□□□□□ -0.57
CCDC47-206ENST00000584112 INTS6Q9UL03 887 aaKnown RBP11.46□□□□□ -0.57
CCDC47-206ENST00000584112 ERVW-1Q9UQF0 538 aa11.46□□□□□ -0.57
CCDC47-206ENST00000584112 NCKAP1Q9Y2A7 1128 aa11.46□□□□□ -0.57
CCDC47-206ENST00000584112 TDRD6O60522 2096 aaKnown RBP11.45□□□□□ -0.58
CCDC47-206ENST00000584112 TRPM6Q9BX84 2022 aa11.45□□□□□ -0.58
CCDC47-206ENST00000584112 CCDC168Q8NDH2 2452 aa11.45□□□□□ -0.58
CCDC47-206ENST00000584112 ITIH6Q6UXX5 1313 aa11.45□□□□□ -0.58
CCDC47-206ENST00000584112 SYNJ2BP-COX16A0A087WUM0 186 aa11.45□□□□□ -0.58
CCDC47-206ENST00000584112 EDDM13A0A1B0GTR0 161 aa11.45□□□□□ -0.58
CCDC47-206ENST00000584112 TARSL2A2RTX5 802 aaKnown RBP11.45□□□□□ -0.58
CCDC47-206ENST00000584112 PCDHGA12O60330 932 aa11.45□□□□□ -0.58
CCDC47-206ENST00000584112 SIN3BO75182 1162 aa11.45□□□□□ -0.58
CCDC47-206ENST00000584112 PPFIA2O75334 1257 aa11.45□□□□□ -0.58
CCDC47-206ENST00000584112 GRAP2O75791 330 aa11.45□□□□□ -0.58
CCDC47-206ENST00000584112 SEMA4FO95754 770 aa11.45□□□□□ -0.58
CCDC47-206ENST00000584112 ERBB2P04626 1255 aa11.45□□□□□ -0.58
CCDC47-206ENST00000584112 C1SP09871 688 aa11.45□□□□□ -0.58
CCDC47-206ENST00000584112 NOS2P35228 1153 aa11.45□□□□□ -0.58
CCDC47-206ENST00000584112 CCT8P50990 548 aa11.45□□□□□ -0.58
CCDC47-206ENST00000584112 PITX1P78337 314 aaPredicted RBP11.45□□□□□ -0.58
CCDC47-206ENST00000584112 ECT2LQ008S8 904 aa11.45□□□□□ -0.58
CCDC47-206ENST00000584112 INSM1Q01101 510 aaPredicted RBP11.45□□□□□ -0.58
CCDC47-206ENST00000584112 SLC6A3Q01959 620 aa11.45□□□□□ -0.58
CCDC47-206ENST00000584112 SULT2A1Q06520 285 aa11.45□□□□□ -0.58
CCDC47-206ENST00000584112 DRAP1Q14919 205 aaPredicted RBP11.45□□□□□ -0.58
CCDC47-206ENST00000584112 PTPN20Q4JDL3 420 aa11.45□□□□□ -0.58
CCDC47-206ENST00000584112 HSP90AA4PQ58FG1 418 aa11.45□□□□□ -0.58
CCDC47-206ENST00000584112 TCP11X2Q5H9J9 407 aa11.45□□□□□ -0.58
CCDC47-206ENST00000584112 FSCBQ5H9T9 825 aa11.45□□□□□ -0.58
CCDC47-206ENST00000584112 KCNT1Q5JUK3 1230 aa11.45□□□□□ -0.58
CCDC47-206ENST00000584112 C1QL3Q5VWW1 255 aa11.45□□□□□ -0.58
CCDC47-206ENST00000584112 OLFML1Q6UWY5 402 aa11.45□□□□□ -0.58
CCDC47-206ENST00000584112 USP30Q70CQ3 517 aa11.45□□□□□ -0.58
CCDC47-206ENST00000584112 TMEM35BQ8NCS4 154 aa11.45□□□□□ -0.58
CCDC47-206ENST00000584112 MSANTD4Q8NCY6 345 aa11.45□□□□□ -0.58
CCDC47-206ENST00000584112 ZNF397Q8NF99 534 aaPredicted RBP11.45□□□□□ -0.58
CCDC47-206ENST00000584112 SNX19Q92543 992 aa11.45□□□□□ -0.58
CCDC47-206ENST00000584112 MYO19Q96H55 970 aa11.45□□□□□ -0.58
CCDC47-206ENST00000584112 PRMT1Q99873 361 aaKnown RBP11.45□□□□□ -0.58
CCDC47-206ENST00000584112 WDR70Q9NW82 654 aa11.45□□□□□ -0.58
CCDC47-206ENST00000584112 COX16Q9P0S2 106 aa11.45□□□□□ -0.58
CCDC47-206ENST00000584112 EIF2B4Q9UI10 523 aaKnown RBP11.45□□□□□ -0.58
CCDC47-206ENST00000584112 AJAP1Q9UKB5 411 aaPredicted RBP11.45□□□□□ -0.58
CCDC47-206ENST00000584112 STAP1Q9ULZ2 295 aa11.45□□□□□ -0.58
CCDC47-206ENST00000584112 HIVEP3Q5T1R4 2406 aa11.44□□□□□ -0.58
CCDC47-206ENST00000584112 TPM2P07951 284 aa11.44□□□□□ -0.58
CCDC47-206ENST00000584112 PNMA6AP0CW24 399 aaPredicted RBP11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms