RNA–Protein interactions for RNA: ENST00000583649.1

CASC3-208, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 3

Gene CASC3, Length 577 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-208ENST00000583649 FUCA2Q9BTY2 467 aa11.42□□□□□ -0.58
CASC3-208ENST00000583649 APOBEC3BQ9UH17 382 aaKnown RBP11.42□□□□□ -0.58
CASC3-208ENST00000583649 SRPK3Q9UPE1 567 aa11.42□□□□□ -0.58
CASC3-208ENST00000583649 TLR6Q9Y2C9 796 aa11.42□□□□□ -0.58
CASC3-208ENST00000583649 LOXL2Q9Y4K0 774 aa11.42□□□□□ -0.58
CASC3-208ENST00000583649 PMS2P1A4D2B8 440 aa11.41□□□□□ -0.58
CASC3-208ENST00000583649 D6RAR5 112 aa11.41□□□□□ -0.58
CASC3-208ENST00000583649 LMO7DNF2Z398 122 aa11.41□□□□□ -0.58
CASC3-208ENST00000583649 NTN3O00634 580 aaPredicted RBP11.41□□□□□ -0.58
CASC3-208ENST00000583649 CAPN5O15484 640 aaPredicted RBP11.41□□□□□ -0.58
CASC3-208ENST00000583649 ATP9BO43861 1147 aa11.41□□□□□ -0.58
CASC3-208ENST00000583649 VPS4BO75351 444 aa11.41□□□□□ -0.58
CASC3-208ENST00000583649 PDCP20941 246 aa11.41□□□□□ -0.58
CASC3-208ENST00000583649 VAMP7P51809 220 aa11.41□□□□□ -0.58
CASC3-208ENST00000583649 CYP4F2P78329 520 aa11.41□□□□□ -0.58
CASC3-208ENST00000583649 DLG4P78352 724 aa11.41□□□□□ -0.58
CASC3-208ENST00000583649 MTA1Q13330 715 aa11.41□□□□□ -0.58
CASC3-208ENST00000583649 FGL2Q14314 439 aa11.41□□□□□ -0.58
CASC3-208ENST00000583649 DLG2Q15700 870 aa11.41□□□□□ -0.58
CASC3-208ENST00000583649 GOLGA7BQ2TAP0 167 aa11.41□□□□□ -0.58
CASC3-208ENST00000583649 PRRT3Q5FWE3 981 aa11.41□□□□□ -0.58
CASC3-208ENST00000583649 RABGAP1LQ5R372 815 aa11.41□□□□□ -0.58
CASC3-208ENST00000583649 PIP5KL1Q5T9C9 394 aa11.41□□□□□ -0.58
CASC3-208ENST00000583649 OR6B2Q6IFH4 312 aa11.41□□□□□ -0.58
CASC3-208ENST00000583649 INTS8Q75QN2 995 aaKnown RBP11.41□□□□□ -0.58
CASC3-208ENST00000583649 CHSY1Q86X52 802 aa11.41□□□□□ -0.58
CASC3-208ENST00000583649 LGI2Q8N0V4 545 aa11.41□□□□□ -0.58
CASC3-208ENST00000583649 ARL10Q8N8L6 244 aa11.41□□□□□ -0.58
CASC3-208ENST00000583649 TMIEQ8NEW7 156 aa11.41□□□□□ -0.58
CASC3-208ENST00000583649 PLEKHO2Q8TD55 490 aa11.41□□□□□ -0.58
CASC3-208ENST00000583649 FRS2Q8WU20 508 aa11.41□□□□□ -0.58
CASC3-208ENST00000583649 NDRG1Q92597 394 aaKnown RBP11.41□□□□□ -0.58
CASC3-208ENST00000583649 HAPLN3Q96S86 360 aa11.41□□□□□ -0.58
CASC3-208ENST00000583649 C7orf25Q9BPX7 421 aa11.41□□□□□ -0.58
CASC3-208ENST00000583649 SLC17A9Q9BYT1 436 aa11.41□□□□□ -0.58
CASC3-208ENST00000583649 SLC39A2Q9NP94 309 aa11.41□□□□□ -0.58
CASC3-208ENST00000583649 CISHQ9NSE2 258 aa11.41□□□□□ -0.58
CASC3-208ENST00000583649 GULP1Q9UBP9 304 aa11.41□□□□□ -0.58
CASC3-208ENST00000583649 TSPAN16Q9UKR8 245 aa11.41□□□□□ -0.58
CASC3-208ENST00000583649 SARDHQ9UL12 918 aa11.41□□□□□ -0.58
CASC3-208ENST00000583649 KIAA1257Q9ULG3 409 aa11.41□□□□□ -0.58
CASC3-208ENST00000583649 VPS4AQ9UN37 437 aa11.41□□□□□ -0.58
CASC3-208ENST00000583649 NOTCH2Q04721 2471 aa11.4□□□□□ -0.58
CASC3-208ENST00000583649 SPTAN1Q13813 2472 aaKnown RBP11.4□□□□□ -0.58
CASC3-208ENST00000583649 PRAMEF33A0A0G2JMD5 474 aa11.4□□□□□ -0.58
CASC3-208ENST00000583649 PVALEFA0A1B0GWK0 134 aa11.4□□□□□ -0.58
CASC3-208ENST00000583649 VPS37CA5D8V6 355 aaPredicted RBP11.4□□□□□ -0.58
CASC3-208ENST00000583649 SPTLC2O15270 562 aa11.4□□□□□ -0.58
CASC3-208ENST00000583649 ZW10O43264 779 aa11.4□□□□□ -0.58
CASC3-208ENST00000583649 SART1O43290 800 aaKnown RBP11.4□□□□□ -0.58
CASC3-208ENST00000583649 CALUO43852 315 aaPredicted RBP11.4□□□□□ -0.58
CASC3-208ENST00000583649 PRAMEF10O60809 474 aa11.4□□□□□ -0.58
CASC3-208ENST00000583649 FBXO21O94952 628 aa11.4□□□□□ -0.58
CASC3-208ENST00000583649 MOCS2O96007 188 aaPredicted RBP11.4□□□□□ -0.58
CASC3-208ENST00000583649 ALPIP09923 528 aa11.4□□□□□ -0.58
CASC3-208ENST00000583649 LCP1P13796 627 aa11.4□□□□□ -0.58
CASC3-208ENST00000583649 VAV1P15498 845 aa11.4□□□□□ -0.58
CASC3-208ENST00000583649 PDGFRAP16234 1089 aa11.4□□□□□ -0.58
CASC3-208ENST00000583649 PLK1P53350 603 aa11.4□□□□□ -0.58
CASC3-208ENST00000583649 ADKP55263 362 aaKnown RBP11.4□□□□□ -0.58
CASC3-208ENST00000583649 DAOAP59103 153 aa11.4□□□□□ -0.58
CASC3-208ENST00000583649 TAS2R38P59533 333 aa11.4□□□□□ -0.58
CASC3-208ENST00000583649 KRT83P78385 493 aa11.4□□□□□ -0.58
CASC3-208ENST00000583649 CEBPZQ03701 1054 aaKnown RBP11.4□□□□□ -0.58
CASC3-208ENST00000583649 ELOCQ15369 112 aa11.4□□□□□ -0.58
CASC3-208ENST00000583649 FAXCQ5TGI0 409 aa11.4□□□□□ -0.58
CASC3-208ENST00000583649 LVRNQ6Q4G3 990 aa11.4□□□□□ -0.58
CASC3-208ENST00000583649 ERN2Q76MJ5 926 aaKnown RBP11.4□□□□□ -0.58
CASC3-208ENST00000583649 SLC35F3Q8IY50 421 aa11.4□□□□□ -0.58
CASC3-208ENST00000583649 SDR16C5Q8N3Y7 309 aa11.4□□□□□ -0.58
CASC3-208ENST00000583649 IL22RA1Q8N6P7 574 aa11.4□□□□□ -0.58
CASC3-208ENST00000583649 SLC4A11Q8NBS3 891 aa11.4□□□□□ -0.58
CASC3-208ENST00000583649 TATDN2Q93075 761 aa11.4□□□□□ -0.58
CASC3-208ENST00000583649 DHX58Q96C10 678 aa11.4□□□□□ -0.58
CASC3-208ENST00000583649 BTN2A3PQ96KV6 586 aa11.4□□□□□ -0.58
CASC3-208ENST00000583649 NOX5Q96PH1 765 aa11.4□□□□□ -0.58
CASC3-208ENST00000583649 PHF12Q96QT6 1004 aa11.4□□□□□ -0.58
CASC3-208ENST00000583649 HDAC8Q9BY41 377 aa11.4□□□□□ -0.58
CASC3-208ENST00000583649 CPEB1Q9BZB8 566 aaKnown RBP11.4□□□□□ -0.58
CASC3-208ENST00000583649 FOXP3Q9BZS1 431 aa11.4□□□□□ -0.58
CASC3-208ENST00000583649 NUCKS1Q9H1E3 243 aaKnown RBP11.4□□□□□ -0.58
CASC3-208ENST00000583649 CREBBPQ92793 2442 aa11.39□□□□□ -0.59
CASC3-208ENST00000583649 TCAF2A6NFQ2 919 aa11.39□□□□□ -0.59
CASC3-208ENST00000583649 ZNF891A8MT65 544 aaPredicted RBP11.39□□□□□ -0.59
CASC3-208ENST00000583649 IQCJ-SCHIP1C9J366 451 aaPredicted RBP11.39□□□□□ -0.59
CASC3-208ENST00000583649 TOR1BO14657 336 aa11.39□□□□□ -0.59
CASC3-208ENST00000583649 MAPK13O15264 365 aa11.39□□□□□ -0.59
CASC3-208ENST00000583649 STX10O60499 249 aa11.39□□□□□ -0.59
CASC3-208ENST00000583649 PAK4O96013 591 aaPredicted RBP11.39□□□□□ -0.59
CASC3-208ENST00000583649 LTFP02788 710 aa11.39□□□□□ -0.59
CASC3-208ENST00000583649 NR3C1P04150 777 aa11.39□□□□□ -0.59
CASC3-208ENST00000583649 RPLP0P05388 317 aaKnown RBP11.39□□□□□ -0.59
CASC3-208ENST00000583649 HGFP14210 728 aa11.39□□□□□ -0.59
CASC3-208ENST00000583649 CD19P15391 556 aa11.39□□□□□ -0.59
CASC3-208ENST00000583649 CHRNA3P32297 505 aa11.39□□□□□ -0.59
CASC3-208ENST00000583649 GCLMP48507 274 aa11.39□□□□□ -0.59
CASC3-208ENST00000583649 PDX1P52945 283 aa11.39□□□□□ -0.59
CASC3-208ENST00000583649 METAP1P53582 386 aa11.39□□□□□ -0.59
CASC3-208ENST00000583649 MAPK10P53779 464 aa11.39□□□□□ -0.59
CASC3-208ENST00000583649 RAD23BP54727 409 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms