RNA–Protein interactions for RNA: ENST00000583595.1

SS18-223, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 3

Gene SS18, Length 375 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-223ENST00000583595 PLPPR4Q7Z2D5 763 aa5.16□□□□□ -1.58
SS18-223ENST00000583595 ADGRA1Q86SQ6 560 aa5.16□□□□□ -1.58
SS18-223ENST00000583595 TMPRSS6Q8IU80 811 aa5.16□□□□□ -1.58
SS18-223ENST00000583595 SUGP2Q8IX01 1082 aaKnown RBP eCLIP5.16□□□□□ -1.58
SS18-223ENST00000583595 GSPT2Q8IYD1 628 aaKnown RBP5.16□□□□□ -1.58
SS18-223ENST00000583595 VPS52Q8N1B4 723 aa5.16□□□□□ -1.58
SS18-223ENST00000583595 NAT8LQ8N9F0 302 aa5.16□□□□□ -1.58
SS18-223ENST00000583595 TDRD5Q8NAT2 981 aaKnown RBP5.16□□□□□ -1.58
SS18-223ENST00000583595 MIEF2Q96C03 454 aa5.16□□□□□ -1.58
SS18-223ENST00000583595 HIC2Q96JB3 615 aa5.16□□□□□ -1.58
SS18-223ENST00000583595 OSBPL9Q96SU4 736 aa5.16□□□□□ -1.58
SS18-223ENST00000583595 NPAS1Q99742 590 aa5.16□□□□□ -1.58
SS18-223ENST00000583595 TPSD1Q9BZJ3 242 aa5.16□□□□□ -1.58
SS18-223ENST00000583595 EDEM3Q9BZQ6 932 aa5.16□□□□□ -1.58
SS18-223ENST00000583595 TSPYL1Q9H0U9 437 aa5.16□□□□□ -1.58
SS18-223ENST00000583595 EPHX3Q9H6B9 360 aa5.16□□□□□ -1.58
SS18-223ENST00000583595 ZNF703Q9H7S9 590 aaPredicted RBP5.16□□□□□ -1.58
SS18-223ENST00000583595 LTB4R2Q9NPC1 389 aa5.16□□□□□ -1.58
SS18-223ENST00000583595 IL1RAPL1Q9NZN1 696 aa5.16□□□□□ -1.58
SS18-223ENST00000583595 HSPB7Q9UBY9 170 aa5.16□□□□□ -1.58
SS18-223ENST00000583595 UTP18Q9Y5J1 556 aaKnown RBP eCLIP5.16□□□□□ -1.58
SS18-223ENST00000583595 GPRASP1Q5JY77 1395 aa5.16□□□□□ -1.58
SS18-223ENST00000583595 SOGA1O94964 1423 aa5.15□□□□□ -1.58
SS18-223ENST00000583595 SNAPC4Q5SXM2 1469 aa5.15□□□□□ -1.58
SS18-223ENST00000583595 A0A1W2PS29 197 aa5.15□□□□□ -1.59
SS18-223ENST00000583595 MYADML2A6NDP7 307 aa5.15□□□□□ -1.59
SS18-223ENST00000583595 C16orf96A6NNT2 1141 aa5.15□□□□□ -1.59
SS18-223ENST00000583595 PSMD9O00233 223 aa5.15□□□□□ -1.59
SS18-223ENST00000583595 CTDSP2O14595 271 aa5.15□□□□□ -1.59
SS18-223ENST00000583595 ATP5BP06576 529 aaKnown RBP5.15□□□□□ -1.59
SS18-223ENST00000583595 CREB1P16220 341 aa5.15□□□□□ -1.59
SS18-223ENST00000583595 PRPH2P23942 346 aa5.15□□□□□ -1.59
SS18-223ENST00000583595 ATP6V1E1P36543 226 aa5.15□□□□□ -1.59
SS18-223ENST00000583595 MSH2P43246 934 aa5.15□□□□□ -1.59
SS18-223ENST00000583595 MTNR1AP48039 350 aa5.15□□□□□ -1.59
SS18-223ENST00000583595 SCNN1GP51170 649 aa5.15□□□□□ -1.59
SS18-223ENST00000583595 ZNF41P51814 821 aaPredicted RBP5.15□□□□□ -1.59
SS18-223ENST00000583595 RRP1P56182 461 aaKnown RBP5.15□□□□□ -1.59
SS18-223ENST00000583595 TFCP2Q12800 502 aa5.15□□□□□ -1.59
SS18-223ENST00000583595 TUBA3CQ13748 450 aa5.15□□□□□ -1.59
SS18-223ENST00000583595 CBFBQ13951 182 aa5.15□□□□□ -1.59
SS18-223ENST00000583595 FHL2Q14192 279 aa5.15□□□□□ -1.59
SS18-223ENST00000583595 PCLAFQ15004 111 aa5.15□□□□□ -1.59
SS18-223ENST00000583595 SLC18A3Q16572 532 aa5.15□□□□□ -1.59
SS18-223ENST00000583595 PDCD4Q53EL6 469 aaKnown RBP5.15□□□□□ -1.59
SS18-223ENST00000583595 METTL24Q5JXM2 366 aa5.15□□□□□ -1.59
SS18-223ENST00000583595 TMEM81Q6P7N7 255 aa5.15□□□□□ -1.59
SS18-223ENST00000583595 TUBA3EQ6PEY2 450 aa5.15□□□□□ -1.59
SS18-223ENST00000583595 Q6ZRM9 215 aa5.15□□□□□ -1.59
SS18-223ENST00000583595 MAPKAPK5Q8IW41 473 aa5.15□□□□□ -1.59
SS18-223ENST00000583595 NDUFAF2Q8N183 169 aa5.15□□□□□ -1.59
SS18-223ENST00000583595 CADM4Q8NFZ8 388 aa5.15□□□□□ -1.59
SS18-223ENST00000583595 RAB40AQ8WXH6 277 aa5.15□□□□□ -1.59
SS18-223ENST00000583595 NACC2Q96BF6 587 aa5.15□□□□□ -1.59
SS18-223ENST00000583595 R3HDM4Q96D70 268 aa5.15□□□□□ -1.59
SS18-223ENST00000583595 VPS50Q96JG6 964 aa5.15□□□□□ -1.59
SS18-223ENST00000583595 FNBP1Q96RU3 617 aa5.15□□□□□ -1.59
SS18-223ENST00000583595 SRSF8Q9BRL6 282 aaKnown RBP5.15□□□□□ -1.59
SS18-223ENST00000583595 ACTRT3Q9BYD9 372 aa5.15□□□□□ -1.59
SS18-223ENST00000583595 GLIS2Q9BZE0 524 aaPredicted RBP5.15□□□□□ -1.59
SS18-223ENST00000583595 TRIM31Q9BZY9 425 aa5.15□□□□□ -1.59
SS18-223ENST00000583595 TTC12Q9H892 705 aaPredicted RBP5.15□□□□□ -1.59
SS18-223ENST00000583595 ERVMER34-1Q9H9K5 563 aa5.15□□□□□ -1.59
SS18-223ENST00000583595 SLC22A11Q9NSA0 550 aa5.15□□□□□ -1.59
SS18-223ENST00000583595 PARPBPQ9NWS1 579 aa5.15□□□□□ -1.59
SS18-223ENST00000583595 INTS6Q9UL03 887 aaKnown RBP5.15□□□□□ -1.59
SS18-223ENST00000583595 NENFQ9UMX5 172 aa5.15□□□□□ -1.59
SS18-223ENST00000583595 PTRH2Q9Y3E5 179 aaKnown RBP5.15□□□□□ -1.59
SS18-223ENST00000583595 WDR97A6NE52 1622 aa5.15□□□□□ -1.59
SS18-223ENST00000583595 TARBP1Q13395 1621 aaKnown RBP5.15□□□□□ -1.59
SS18-223ENST00000583595 FGD5Q6ZNL6 1462 aa5.14□□□□□ -1.59
SS18-223ENST00000583595 ARAP1Q96P48 1450 aa5.14□□□□□ -1.59
SS18-223ENST00000583595 hCG_1809904A0A1W2PP81 198 aa5.14□□□□□ -1.59
SS18-223ENST00000583595 A0A1W2PPE2 198 aa5.14□□□□□ -1.59
SS18-223ENST00000583595 A0A1W2PQF6 199 aa5.14□□□□□ -1.59
SS18-223ENST00000583595 A0A1W2PR64 198 aa5.14□□□□□ -1.59
SS18-223ENST00000583595 GTPBP10A4D1E9 387 aaKnown RBP5.14□□□□□ -1.59
SS18-223ENST00000583595 A8MXE2 369 aa5.14□□□□□ -1.59
SS18-223ENST00000583595 H0Y626 953 aa5.14□□□□□ -1.59
SS18-223ENST00000583595 SUV39H1O43463 412 aa5.14□□□□□ -1.59
SS18-223ENST00000583595 PMPCBO75439 489 aa5.14□□□□□ -1.59
SS18-223ENST00000583595 PSMD10O75832 226 aa5.14□□□□□ -1.59
SS18-223ENST00000583595 EEF1DP29692 281 aaKnown RBP5.14□□□□□ -1.59
SS18-223ENST00000583595 CIITAP33076 1130 aa5.14□□□□□ -1.59
SS18-223ENST00000583595 MCM7P33993 719 aa5.14□□□□□ -1.59
SS18-223ENST00000583595 THPOP40225 353 aa5.14□□□□□ -1.59
SS18-223ENST00000583595 NRIP1P48552 1158 aa5.14□□□□□ -1.59
SS18-223ENST00000583595 RPS6KA3P51812 740 aa5.14□□□□□ -1.59
SS18-223ENST00000583595 MRPL12P52815 198 aaKnown RBP5.14□□□□□ -1.59
SS18-223ENST00000583595 PRAMEP78395 509 aa5.14□□□□□ -1.59
SS18-223ENST00000583595 AIMP2Q13155 320 aaKnown RBP5.14□□□□□ -1.59
SS18-223ENST00000583595 IL13RA2Q14627 380 aa5.14□□□□□ -1.59
SS18-223ENST00000583595 GPR162Q16538 588 aa5.14□□□□□ -1.59
SS18-223ENST00000583595 ST3GAL2Q16842 350 aa5.14□□□□□ -1.59
SS18-223ENST00000583595 GEN1Q17RS7 908 aa5.14□□□□□ -1.59
SS18-223ENST00000583595 MMEL1Q495T6 779 aa5.14□□□□□ -1.59
SS18-223ENST00000583595 C1QL3Q5VWW1 255 aa5.14□□□□□ -1.59
SS18-223ENST00000583595 B3GNTL1Q67FW5 361 aaPredicted RBP5.14□□□□□ -1.59
SS18-223ENST00000583595 KIAA0930Q6ICG6 404 aaPredicted RBP5.14□□□□□ -1.59
SS18-223ENST00000583595 ZNF449Q6P9G9 518 aa5.14□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms