RNA–Protein interactions for RNA: ENST00000582821.5

GGA3-215, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 2

Gene GGA3, Length 1,018 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-215ENST00000582821 FZD4Q9ULV1 537 aa14.29□□□□□ -0.12
GGA3-215ENST00000582821 SLC6A14Q9UN76 642 aa14.29□□□□□ -0.12
GGA3-215ENST00000582821 LNP1A1A4G5 178 aa14.28□□□□□ -0.12
GGA3-215ENST00000582821 CBX4O00257 560 aa14.28□□□□□ -0.12
GGA3-215ENST00000582821 TM4SF5O14894 197 aa14.28□□□□□ -0.12
GGA3-215ENST00000582821 MID1O15344 667 aa14.28□□□□□ -0.12
GGA3-215ENST00000582821 SMAD6O43541 496 aaKnown RBP14.28□□□□□ -0.12
GGA3-215ENST00000582821 SEMA4FO95754 770 aa14.28□□□□□ -0.12
GGA3-215ENST00000582821 CD160O95971 181 aa14.28□□□□□ -0.12
GGA3-215ENST00000582821 SERPINF2P08697 491 aa14.28□□□□□ -0.12
GGA3-215ENST00000582821 GOT1P17174 413 aa14.28□□□□□ -0.12
GGA3-215ENST00000582821 EPHB2P29323 1055 aa14.28□□□□□ -0.12
GGA3-215ENST00000582821 MIPP30301 263 aa14.28□□□□□ -0.12
GGA3-215ENST00000582821 EIF4A3P38919 411 aaKnown RBP14.28□□□□□ -0.12
GGA3-215ENST00000582821 ZNF135P52742 658 aaPredicted RBP14.28□□□□□ -0.12
GGA3-215ENST00000582821 YBEYP58557 167 aaPredicted RBP14.28□□□□□ -0.12
GGA3-215ENST00000582821 PIGHQ14442 188 aaPredicted RBP14.28□□□□□ -0.12
GGA3-215ENST00000582821 ASTE1Q2TB18 679 aaPredicted RBP14.28□□□□□ -0.12
GGA3-215ENST00000582821 TRIM61Q5EBN2 209 aa14.28□□□□□ -0.12
GGA3-215ENST00000582821 CCDC122Q5T0U0 273 aa14.28□□□□□ -0.12
GGA3-215ENST00000582821 STPG1Q5TH74 334 aa14.28□□□□□ -0.12
GGA3-215ENST00000582821 DCAF12L1Q5VU92 463 aa14.28□□□□□ -0.12
GGA3-215ENST00000582821 FAM46CQ5VWP2 391 aa14.28□□□□□ -0.12
GGA3-215ENST00000582821 Q6ZVU0 165 aa14.28□□□□□ -0.12
GGA3-215ENST00000582821 FAM124AQ86V42 546 aa14.28□□□□□ -0.12
GGA3-215ENST00000582821 PLPP6Q8IY26 295 aa14.28□□□□□ -0.12
GGA3-215ENST00000582821 OR2A12Q8NGT7 310 aa14.28□□□□□ -0.12
GGA3-215ENST00000582821 C1orf216Q8TAB5 229 aa14.28□□□□□ -0.12
GGA3-215ENST00000582821 NUSAP1Q9BXS6 441 aaKnown RBP14.28□□□□□ -0.12
GGA3-215ENST00000582821 CEP44Q9C0F1 390 aa14.28□□□□□ -0.12
GGA3-215ENST00000582821 THAP2Q9H0W7 228 aa14.28□□□□□ -0.12
GGA3-215ENST00000582821 NEUROG2Q9H2A3 272 aa14.28□□□□□ -0.12
GGA3-215ENST00000582821 DNAI1Q9UI46 699 aa14.28□□□□□ -0.12
GGA3-215ENST00000582821 ADAMTS9Q9P2N4 1935 aa14.27□□□□□ -0.12
GGA3-215ENST00000582821 A0A1W2PP55 124 aa14.27□□□□□ -0.13
GGA3-215ENST00000582821 K7ERQ8 282 aa14.27□□□□□ -0.13
GGA3-215ENST00000582821 FGF10O15520 208 aaPredicted RBP14.27□□□□□ -0.13
GGA3-215ENST00000582821 KDELR3O43731 214 aa14.27□□□□□ -0.13
GGA3-215ENST00000582821 CREB3O43889 395 aa14.27□□□□□ -0.13
GGA3-215ENST00000582821 PRPSAP2O60256 369 aa14.27□□□□□ -0.13
GGA3-215ENST00000582821 RAMP2O60895 175 aa14.27□□□□□ -0.13
GGA3-215ENST00000582821 LRCH4O75427 683 aa14.27□□□□□ -0.13
GGA3-215ENST00000582821 ZNF821O75541 412 aaPredicted RBP14.27□□□□□ -0.13
GGA3-215ENST00000582821 IL1BP01584 269 aa14.27□□□□□ -0.13
GGA3-215ENST00000582821 TPM1P09493 284 aa14.27□□□□□ -0.13
GGA3-215ENST00000582821 GNSP15586 552 aa14.27□□□□□ -0.13
GGA3-215ENST00000582821 GLDCP23378 1020 aa14.27□□□□□ -0.13
GGA3-215ENST00000582821 ACVRL1P37023 503 aa14.27□□□□□ -0.13
GGA3-215ENST00000582821 HCAR3P49019 387 aa14.27□□□□□ -0.13
GGA3-215ENST00000582821 SERPINH1P50454 418 aaKnown RBP14.27□□□□□ -0.13
GGA3-215ENST00000582821 GALCP54803 685 aa14.27□□□□□ -0.13
GGA3-215ENST00000582821 GEMIN4P57678 1058 aaKnown RBP14.27□□□□□ -0.13
GGA3-215ENST00000582821 ARF5P84085 180 aa14.27□□□□□ -0.13
GGA3-215ENST00000582821 TBX2Q13207 712 aaPredicted RBP14.27□□□□□ -0.13
GGA3-215ENST00000582821 POLD3Q15054 466 aaPredicted RBP14.27□□□□□ -0.13
GGA3-215ENST00000582821 SLC18A3Q16572 532 aa14.27□□□□□ -0.13
GGA3-215ENST00000582821 TSR1Q2NL82 804 aaKnown RBP14.27□□□□□ -0.13
GGA3-215ENST00000582821 BOLA3Q53S33 107 aa14.27□□□□□ -0.13
GGA3-215ENST00000582821 IL31Q6EBC2 164 aa14.27□□□□□ -0.13
GGA3-215ENST00000582821 LINGO4Q6UY18 593 aa14.27□□□□□ -0.13
GGA3-215ENST00000582821 CYP4V2Q6ZWL3 525 aaPredicted RBP14.27□□□□□ -0.13
GGA3-215ENST00000582821 ERMP1Q7Z2K6 904 aa14.27□□□□□ -0.13
GGA3-215ENST00000582821 RGL4Q8IZJ4 473 aa14.27□□□□□ -0.13
GGA3-215ENST00000582821 UMODL1-AS1Q8N2C9 162 aa14.27□□□□□ -0.13
GGA3-215ENST00000582821 AADATQ8N5Z0 425 aa14.27□□□□□ -0.13
GGA3-215ENST00000582821 NIPA2Q8N8Q9 360 aa14.27□□□□□ -0.13
GGA3-215ENST00000582821 TMIEQ8NEW7 156 aa14.27□□□□□ -0.13
GGA3-215ENST00000582821 ISG20Q96AZ6 181 aaKnown RBP14.27□□□□□ -0.13
GGA3-215ENST00000582821 CCDC114Q96M63 670 aa14.27□□□□□ -0.13
GGA3-215ENST00000582821 PEBP4Q96S96 227 aa14.27□□□□□ -0.13
GGA3-215ENST00000582821 OMDQ99983 421 aa14.27□□□□□ -0.13
GGA3-215ENST00000582821 C6orf106Q9H6K1 298 aaPredicted RBP14.27□□□□□ -0.13
GGA3-215ENST00000582821 NOL6Q9H6R4 1146 aaKnown RBP14.27□□□□□ -0.13
GGA3-215ENST00000582821 OSGEPQ9NPF4 335 aa14.27□□□□□ -0.13
GGA3-215ENST00000582821 ZNHIT6Q9NWK9 470 aaKnown RBP14.27□□□□□ -0.13
GGA3-215ENST00000582821 SERGEFQ9UGK8 458 aa14.27□□□□□ -0.13
GGA3-215ENST00000582821 SARDHQ9UL12 918 aa14.27□□□□□ -0.13
GGA3-215ENST00000582821 HPCAL4Q9UM19 191 aa14.27□□□□□ -0.13
GGA3-215ENST00000582821 AP4E1Q9UPM8 1137 aa14.27□□□□□ -0.13
GGA3-215ENST00000582821 FARP1Q9Y4F1 1045 aaPredicted RBP14.27□□□□□ -0.13
GGA3-215ENST00000582821 PCDH15Q96QU1 1955 aa14.27□□□□□ -0.13
GGA3-215ENST00000582821 DOCK9Q9BZ29 2069 aa14.26□□□□□ -0.13
GGA3-215ENST00000582821 ATXN2Q99700 1313 aaKnown RBP14.26□□□□□ -0.13
GGA3-215ENST00000582821 A0A1B0GTW7 788 aa14.26□□□□□ -0.13
GGA3-215ENST00000582821 MEI4A8MW99 385 aa14.26□□□□□ -0.13
GGA3-215ENST00000582821 C1QTNF3-AMACRE9PGA6 284 aa14.26□□□□□ -0.13
GGA3-215ENST00000582821 CDX4O14627 284 aaPredicted RBP14.26□□□□□ -0.13
GGA3-215ENST00000582821 SLC7A4O43246 635 aa14.26□□□□□ -0.13
GGA3-215ENST00000582821 RNASEH2AO75792 299 aaKnown RBP14.26□□□□□ -0.13
GGA3-215ENST00000582821 MAOBP27338 520 aa14.26□□□□□ -0.13
GGA3-215ENST00000582821 CHRNA3P32297 505 aa14.26□□□□□ -0.13
GGA3-215ENST00000582821 DRD3P35462 400 aa14.26□□□□□ -0.13
GGA3-215ENST00000582821 PSMD8P48556 350 aa14.26□□□□□ -0.13
GGA3-215ENST00000582821 GFPT1Q06210 699 aaPredicted RBP14.26□□□□□ -0.13
GGA3-215ENST00000582821 C22orf39Q6P5X5 142 aa14.26□□□□□ -0.13
GGA3-215ENST00000582821 HDDC3Q8N4P3 179 aa14.26□□□□□ -0.13
GGA3-215ENST00000582821 PCDH20Q8N6Y1 951 aaKnown RBP14.26□□□□□ -0.13
GGA3-215ENST00000582821 GANCQ8TET4 914 aa14.26□□□□□ -0.13
GGA3-215ENST00000582821 SNRNP25Q9BV90 132 aaKnown RBP14.26□□□□□ -0.13
GGA3-215ENST00000582821 EDEM2Q9BV94 578 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms