RNA–Protein interactions for RNA: ENST00000581631.1

SMCHD1-206, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 729 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-206ENST00000581631 TMEM88Q6PEY1 159 aa3.69□□□□□ -1.82
SMCHD1-206ENST00000581631 FJX1Q86VR8 437 aa3.69□□□□□ -1.82
SMCHD1-206ENST00000581631 FAM185AQ8N0U4 392 aa3.69□□□□□ -1.82
SMCHD1-206ENST00000581631 TCP11L2Q8N4U5 519 aa3.69□□□□□ -1.82
SMCHD1-206ENST00000581631 OR14A16Q8NHC5 309 aa3.69□□□□□ -1.82
SMCHD1-206ENST00000581631 LILRB1Q8NHL6 650 aaPredicted RBP3.69□□□□□ -1.82
SMCHD1-206ENST00000581631 SLC52A1Q9NWF4 448 aa3.69□□□□□ -1.82
SMCHD1-206ENST00000581631 STMND1H3BQB6 276 aa3.68□□□□□ -1.82
SMCHD1-206ENST00000581631 DNPH1O43598 174 aa3.68□□□□□ -1.82
SMCHD1-206ENST00000581631 PLIN1O60240 522 aa3.68□□□□□ -1.82
SMCHD1-206ENST00000581631 CYP3A4P08684 503 aa3.68□□□□□ -1.82
SMCHD1-206ENST00000581631 CHRNA5P30532 468 aa3.68□□□□□ -1.82
SMCHD1-206ENST00000581631 THPOP40225 353 aa3.68□□□□□ -1.82
SMCHD1-206ENST00000581631 TECP42680 631 aa3.68□□□□□ -1.82
SMCHD1-206ENST00000581631 PPP3CCP48454 512 aa3.68□□□□□ -1.82
SMCHD1-206ENST00000581631 CXCR3P49682 368 aa3.68□□□□□ -1.82
SMCHD1-206ENST00000581631 NUDT6P53370 316 aa3.68□□□□□ -1.82
SMCHD1-206ENST00000581631 RPL15P61313 204 aaKnown RBP3.68□□□□□ -1.82
SMCHD1-206ENST00000581631 BTKQ06187 659 aa3.68□□□□□ -1.82
SMCHD1-206ENST00000581631 HLFQ16534 295 aa3.68□□□□□ -1.82
SMCHD1-206ENST00000581631 SYCP2LQ5T4T6 812 aa3.68□□□□□ -1.82
SMCHD1-206ENST00000581631 GGT6Q6P531 493 aa3.68□□□□□ -1.82
SMCHD1-206ENST00000581631 DSTYKQ6XUX3 929 aa3.68□□□□□ -1.82
SMCHD1-206ENST00000581631 CCDC146Q8IYE0 955 aa3.68□□□□□ -1.82
SMCHD1-206ENST00000581631 CMASQ8NFW8 434 aaPredicted RBP3.68□□□□□ -1.82
SMCHD1-206ENST00000581631 SVIPQ8NHG7 77 aa3.68□□□□□ -1.82
SMCHD1-206ENST00000581631 STYXQ8WUJ0 223 aa3.68□□□□□ -1.82
SMCHD1-206ENST00000581631 ARFGAP3Q9NP61 516 aa3.68□□□□□ -1.82
SMCHD1-206ENST00000581631 OCIAD1Q9NX40 245 aa3.68□□□□□ -1.82
SMCHD1-206ENST00000581631 IL36RNQ9UBH0 155 aa3.68□□□□□ -1.82
SMCHD1-206ENST00000581631 RAB21Q9UL25 225 aa3.68□□□□□ -1.82
SMCHD1-206ENST00000581631 ADAM18Q9Y3Q7 739 aa3.68□□□□□ -1.82
SMCHD1-206ENST00000581631 KIF28PB7ZC32 967 aa3.67□□□□□ -1.82
SMCHD1-206ENST00000581631 KCNJ13O60928 360 aa3.67□□□□□ -1.82
SMCHD1-206ENST00000581631 TNFRSF6BO95407 300 aa3.67□□□□□ -1.82
SMCHD1-206ENST00000581631 SERPINB3P29508 390 aa3.67□□□□□ -1.82
SMCHD1-206ENST00000581631 STAT1P42224 750 aa3.67□□□□□ -1.82
SMCHD1-206ENST00000581631 FAM3BP58499 235 aaPredicted RBP3.67□□□□□ -1.82
SMCHD1-206ENST00000581631 BTBD16Q32M84 506 aa3.67□□□□□ -1.82
SMCHD1-206ENST00000581631 ARL13AQ5H913 290 aaPredicted RBP3.67□□□□□ -1.82
SMCHD1-206ENST00000581631 TRABD2AQ86V40 505 aa3.67□□□□□ -1.82
SMCHD1-206ENST00000581631 CCDC25Q86WR0 208 aa3.67□□□□□ -1.82
SMCHD1-206ENST00000581631 GATAD2AQ86YP4 633 aa3.67□□□□□ -1.82
SMCHD1-206ENST00000581631 NRSN1Q8IZ57 195 aa3.67□□□□□ -1.82
SMCHD1-206ENST00000581631 TMEM217Q8N7C4 229 aa3.67□□□□□ -1.82
SMCHD1-206ENST00000581631 LRRC57Q8N9N7 239 aa3.67□□□□□ -1.82
SMCHD1-206ENST00000581631 WDR60Q8WVS4 1066 aa3.67□□□□□ -1.82
SMCHD1-206ENST00000581631 TMEM41AQ96HV5 264 aa3.67□□□□□ -1.82
SMCHD1-206ENST00000581631 REXO5Q96IC2 774 aaKnown RBP3.67□□□□□ -1.82
SMCHD1-206ENST00000581631 PCGF6Q9BYE7 350 aa3.67□□□□□ -1.82
SMCHD1-206ENST00000581631 CCDC134Q9H6E4 229 aa3.67□□□□□ -1.82
SMCHD1-206ENST00000581631 TRPC5Q9UL62 973 aaPredicted RBP3.67□□□□□ -1.82
SMCHD1-206ENST00000581631 DAOP14920 347 aa3.66□□□□□ -1.82
SMCHD1-206ENST00000581631 AVPR1AP37288 418 aa3.66□□□□□ -1.82
SMCHD1-206ENST00000581631 CRIP2P52943 208 aaPredicted RBP3.66□□□□□ -1.82
SMCHD1-206ENST00000581631 RNASELQ05823 741 aaKnown RBP3.66□□□□□ -1.82
SMCHD1-206ENST00000581631 SPARCL1Q14515 664 aa3.66□□□□□ -1.82
SMCHD1-206ENST00000581631 VWA5B1Q5TIE3 1220 aa3.66□□□□□ -1.82
SMCHD1-206ENST00000581631 IGFN1Q86VF2 1251 aa3.66□□□□□ -1.82
SMCHD1-206ENST00000581631 KLBQ86Z14 1044 aa3.66□□□□□ -1.82
SMCHD1-206ENST00000581631 FAM110DQ8TAY7 271 aaPredicted RBP3.66□□□□□ -1.82
SMCHD1-206ENST00000581631 TMEM163Q8TC26 289 aa3.66□□□□□ -1.82
SMCHD1-206ENST00000581631 MECRQ9BV79 373 aa3.66□□□□□ -1.82
SMCHD1-206ENST00000581631 OBP2BQ9NPH6 170 aa3.66□□□□□ -1.82
SMCHD1-206ENST00000581631 ZDHHC7Q9NXF8 308 aa3.66□□□□□ -1.82
SMCHD1-206ENST00000581631 AGO1Q9UL18 857 aaKnown RBP3.66□□□□□ -1.82
SMCHD1-206ENST00000581631 SLC12A4Q9UP95 1085 aa3.66□□□□□ -1.82
SMCHD1-206ENST00000581631 OBSCNQ5VST9 7968 aa3.66□□□□□ -1.82
SMCHD1-206ENST00000581631 A0A087WV62 115 aa3.65□□□□□ -1.83
SMCHD1-206ENST00000581631 IGHV4-28A0A0C4DH34 117 aa3.65□□□□□ -1.83
SMCHD1-206ENST00000581631 LGALS16A8MUM7 142 aa3.65□□□□□ -1.83
SMCHD1-206ENST00000581631 FFAR2O15552 330 aa3.65□□□□□ -1.83
SMCHD1-206ENST00000581631 ASAP2O43150 1006 aa3.65□□□□□ -1.83
SMCHD1-206ENST00000581631 SERPINB2P05120 415 aa3.65□□□□□ -1.83
SMCHD1-206ENST00000581631 UNGP13051 313 aaPredicted RBP3.65□□□□□ -1.83
SMCHD1-206ENST00000581631 GYS1P13807 737 aa3.65□□□□□ -1.83
SMCHD1-206ENST00000581631 GRK5P34947 590 aa3.65□□□□□ -1.83
SMCHD1-206ENST00000581631 TAF6P49848 677 aa3.65□□□□□ -1.83
SMCHD1-206ENST00000581631 ARL16Q0P5N6 197 aa3.65□□□□□ -1.83
SMCHD1-206ENST00000581631 SF3A3Q12874 501 aaKnown RBP eCLIP3.65□□□□□ -1.834e-6■■■■□ 22.2
SMCHD1-206ENST00000581631 SLC39A14Q15043 492 aa3.65□□□□□ -1.83
SMCHD1-206ENST00000581631 PLK5Q496M5 336 aa3.65□□□□□ -1.83
SMCHD1-206ENST00000581631 DCUN1D3Q8IWE4 304 aa3.65□□□□□ -1.83
SMCHD1-206ENST00000581631 ZNF527Q8NB42 609 aa3.65□□□□□ -1.83
SMCHD1-206ENST00000581631 OR1N1Q8NGS0 311 aa3.65□□□□□ -1.83
SMCHD1-206ENST00000581631 FAM71BQ8TC56 605 aa3.65□□□□□ -1.83
SMCHD1-206ENST00000581631 PGLYRP2Q96PD5 576 aa3.65□□□□□ -1.83
SMCHD1-206ENST00000581631 TP63Q9H3D4 680 aaPredicted RBP3.65□□□□□ -1.83
SMCHD1-206ENST00000581631 ACTR5Q9H9F9 607 aaPredicted RBP3.65□□□□□ -1.83
SMCHD1-206ENST00000581631 ZBTB1Q9Y2K1 713 aa3.65□□□□□ -1.83
SMCHD1-206ENST00000581631 LRCH1Q9Y2L9 728 aa3.65□□□□□ -1.83
SMCHD1-206ENST00000581631 PKP3Q9Y446 797 aa3.65□□□□□ -1.83
SMCHD1-206ENST00000581631 TBC1D3DA0A087WVF3 549 aa3.64□□□□□ -1.83
SMCHD1-206ENST00000581631 TBC1D3IA0A087WXS9 549 aa3.64□□□□□ -1.83
SMCHD1-206ENST00000581631 TBC1D3EA0A087X179 549 aa3.64□□□□□ -1.83
SMCHD1-206ENST00000581631 TBC1D3KA0A087X1G2 549 aa3.64□□□□□ -1.83
SMCHD1-206ENST00000581631 LINC01553A4QN01 128 aa3.64□□□□□ -1.83
SMCHD1-206ENST00000581631 TBC1D3BA6NDS4 549 aa3.64□□□□□ -1.83
SMCHD1-206ENST00000581631 TBC1D3FA6NER0 549 aaPredicted RBP3.64□□□□□ -1.83
SMCHD1-206ENST00000581631 GOLGA6L3A6NEY3 463 aa3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms