RNA–Protein interactions for RNA: ENST00000581383.1

SMCHD1-205, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 806 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-205ENST00000581383 NPLQ9BXD5 320 aaPredicted RBP5.09□□□□□ -1.59
SMCHD1-205ENST00000581383 TTYH1Q9H313 450 aaPredicted RBP5.09□□□□□ -1.59
SMCHD1-205ENST00000581383 TTC12Q9H892 705 aaPredicted RBP5.09□□□□□ -1.59
SMCHD1-205ENST00000581383 C17orf100A8MU93 164 aa5.08□□□□□ -1.6
SMCHD1-205ENST00000581383 TNPO2O14787 897 aaKnown RBP5.08□□□□□ -1.6
SMCHD1-205ENST00000581383 SPTLC2O15270 562 aa5.08□□□□□ -1.6
SMCHD1-205ENST00000581383 MSI1O43347 362 aaKnown RBP5.08□□□□□ -1.6
SMCHD1-205ENST00000581383 USP12O75317 370 aa5.08□□□□□ -1.6
SMCHD1-205ENST00000581383 CD63P08962 238 aa5.08□□□□□ -1.6
SMCHD1-205ENST00000581383 FCGR2AP12318 317 aa5.08□□□□□ -1.6
SMCHD1-205ENST00000581383 PAFAH1B1P43034 410 aa5.08□□□□□ -1.6
SMCHD1-205ENST00000581383 PTPN9P43378 593 aa5.08□□□□□ -1.6
SMCHD1-205ENST00000581383 MTNR1AP48039 350 aa5.08□□□□□ -1.6
SMCHD1-205ENST00000581383 RHAGQ02094 409 aa5.08□□□□□ -1.6
SMCHD1-205ENST00000581383 GHRHRQ02643 423 aa5.08□□□□□ -1.6
SMCHD1-205ENST00000581383 STIM1Q13586 685 aa5.08□□□□□ -1.6
SMCHD1-205ENST00000581383 GALNT3Q14435 633 aa5.08□□□□□ -1.6
SMCHD1-205ENST00000581383 EARS2Q5JPH6 523 aaKnown RBP5.08□□□□□ -1.6
SMCHD1-205ENST00000581383 FAAH2Q6GMR7 532 aa5.08□□□□□ -1.6
SMCHD1-205ENST00000581383 FAM180BQ6P0A1 224 aa5.08□□□□□ -1.6
SMCHD1-205ENST00000581383 TMED8Q6PL24 325 aaPredicted RBP5.08□□□□□ -1.6
SMCHD1-205ENST00000581383 TECPR1Q7Z6L1 1165 aa5.08□□□□□ -1.6
SMCHD1-205ENST00000581383 ADGRF4Q8IZF3 695 aa5.08□□□□□ -1.6
SMCHD1-205ENST00000581383 TMEM217Q8N7C4 229 aa5.08□□□□□ -1.6
SMCHD1-205ENST00000581383 RFWD2Q8NHY2 731 aa5.08□□□□□ -1.6
SMCHD1-205ENST00000581383 KAT2AQ92830 837 aa5.08□□□□□ -1.6
SMCHD1-205ENST00000581383 ELP4Q96EB1 424 aa5.08□□□□□ -1.6
SMCHD1-205ENST00000581383 EYA3Q99504 573 aa5.08□□□□□ -1.6
SMCHD1-205ENST00000581383 FUZQ9BT04 418 aa5.08□□□□□ -1.6
SMCHD1-205ENST00000581383 WACQ9BTA9 647 aa5.08□□□□□ -1.6
SMCHD1-205ENST00000581383 CADM1Q9BY67 442 aaKnown RBP5.08□□□□□ -1.6
SMCHD1-205ENST00000581383 XRN2Q9H0D6 950 aaKnown RBP eCLIP5.08□□□□□ -1.6
SMCHD1-205ENST00000581383 INTS2Q9H0H0 1204 aaKnown RBP5.08□□□□□ -1.6
SMCHD1-205ENST00000581383 LMAN2LQ9H0V9 348 aa5.08□□□□□ -1.6
SMCHD1-205ENST00000581383 MOV10Q9HCE1 1003 aaKnown RBP5.08□□□□□ -1.6
SMCHD1-205ENST00000581383 Q9N2J8 555 aa5.08□□□□□ -1.6
SMCHD1-205ENST00000581383 UPB1Q9UBR1 384 aa5.08□□□□□ -1.6
SMCHD1-205ENST00000581383 C2CD4BA6NLJ0 364 aa5.07□□□□□ -1.6
SMCHD1-205ENST00000581383 B4E171 279 aa5.07□□□□□ -1.6
SMCHD1-205ENST00000581383 KCNJ18B7U540 433 aa5.07□□□□□ -1.6
SMCHD1-205ENST00000581383 SOCS2O14508 198 aa5.07□□□□□ -1.6
SMCHD1-205ENST00000581383 STRNO43815 780 aa5.07□□□□□ -1.6
SMCHD1-205ENST00000581383 UGDHO60701 494 aa5.07□□□□□ -1.6
SMCHD1-205ENST00000581383 CBX6O95503 412 aa5.07□□□□□ -1.6
SMCHD1-205ENST00000581383 TBX18O95935 607 aa5.07□□□□□ -1.6
SMCHD1-205ENST00000581383 CBSLP0DN79 551 aa5.07□□□□□ -1.6
SMCHD1-205ENST00000581383 TFEBP19484 476 aa5.07□□□□□ -1.6
SMCHD1-205ENST00000581383 CBSP35520 551 aa5.07□□□□□ -1.6
SMCHD1-205ENST00000581383 GJC1P36383 396 aa5.07□□□□□ -1.6
SMCHD1-205ENST00000581383 TSPAN7P41732 249 aa5.07□□□□□ -1.6
SMCHD1-205ENST00000581383 CDH15P55291 814 aa5.07□□□□□ -1.6
SMCHD1-205ENST00000581383 LAMB3Q13751 1172 aa5.07□□□□□ -1.6
SMCHD1-205ENST00000581383 PGM5Q15124 567 aa5.07□□□□□ -1.6
SMCHD1-205ENST00000581383 MAPRE1Q15691 268 aaKnown RBP5.07□□□□□ -1.6
SMCHD1-205ENST00000581383 Q4G0T1 1027 aa5.07□□□□□ -1.6
SMCHD1-205ENST00000581383 FBXO43Q4G163 708 aa5.07□□□□□ -1.6
SMCHD1-205ENST00000581383 KIAA1755Q5JYT7 1200 aa5.07□□□□□ -1.6
SMCHD1-205ENST00000581383 FAM69AQ5T7M9 428 aa5.07□□□□□ -1.6
SMCHD1-205ENST00000581383 NAA35Q5VZE5 725 aa5.07□□□□□ -1.6
SMCHD1-205ENST00000581383 AWAT2Q6E213 333 aa5.07□□□□□ -1.6
SMCHD1-205ENST00000581383 MON1AQ86VX9 555 aa5.07□□□□□ -1.6
SMCHD1-205ENST00000581383 SCAIQ8N9R8 606 aa5.07□□□□□ -1.6
SMCHD1-205ENST00000581383 SETD9Q8NE22 299 aa5.07□□□□□ -1.6
SMCHD1-205ENST00000581383 CNOT9Q92600 299 aaKnown RBP5.07□□□□□ -1.6
SMCHD1-205ENST00000581383 HDAC2Q92769 488 aaKnown RBP5.07□□□□□ -1.6
SMCHD1-205ENST00000581383 MPHOSPH8Q99549 860 aa5.07□□□□□ -1.6
SMCHD1-205ENST00000581383 FRMD8Q9BZ67 464 aaPredicted RBP5.07□□□□□ -1.6
SMCHD1-205ENST00000581383 TSPAN4O14817 238 aa5.06□□□□□ -1.6
SMCHD1-205ENST00000581383 PER2O15055 1255 aa5.06□□□□□ -1.6
SMCHD1-205ENST00000581383 HBP1O60381 514 aa5.06□□□□□ -1.6
SMCHD1-205ENST00000581383 RTN3O95197 1032 aaPredicted RBP5.06□□□□□ -1.6
SMCHD1-205ENST00000581383 HLA-DQA2P01906 255 aa5.06□□□□□ -1.6
SMCHD1-205ENST00000581383 FGBP02675 491 aa5.06□□□□□ -1.6
SMCHD1-205ENST00000581383 URODP06132 367 aa5.06□□□□□ -1.6
SMCHD1-205ENST00000581383 KLRC2P26717 231 aa5.06□□□□□ -1.6
SMCHD1-205ENST00000581383 STAT1P42224 750 aa5.06□□□□□ -1.6
SMCHD1-205ENST00000581383 GPD2P43304 727 aa5.06□□□□□ -1.6
SMCHD1-205ENST00000581383 NR4A2P43354 598 aa5.06□□□□□ -1.6
SMCHD1-205ENST00000581383 CPA2P48052 419 aa5.06□□□□□ -1.6
SMCHD1-205ENST00000581383 CYP2J2P51589 502 aa5.06□□□□□ -1.6
SMCHD1-205ENST00000581383 SLC12A2P55011 1212 aa5.06□□□□□ -1.6
SMCHD1-205ENST00000581383 HSF1Q00613 529 aa5.06□□□□□ -1.6
SMCHD1-205ENST00000581383 DAZAP2Q15038 168 aaPredicted RBP5.06□□□□□ -1.6
SMCHD1-205ENST00000581383 SLC18A3Q16572 532 aa5.06□□□□□ -1.6
SMCHD1-205ENST00000581383 MEX3CQ5U5Q3 659 aaKnown RBP5.06□□□□□ -1.6
SMCHD1-205ENST00000581383 FAM171A1Q5VUB5 890 aa5.06□□□□□ -1.6
SMCHD1-205ENST00000581383 AADACL2Q6P093 401 aa5.06□□□□□ -1.6
SMCHD1-205ENST00000581383 GJB7Q6PEY0 223 aa5.06□□□□□ -1.6
SMCHD1-205ENST00000581383 CYB5R4Q7L1T6 521 aa5.06□□□□□ -1.6
SMCHD1-205ENST00000581383 R3HCC1LQ7Z5L2 792 aaKnown RBP5.06□□□□□ -1.6
SMCHD1-205ENST00000581383 ARMC8Q8IUR7 673 aa5.06□□□□□ -1.6
SMCHD1-205ENST00000581383 GADD45GIP1Q8TAE8 222 aaPredicted RBP5.06□□□□□ -1.6
SMCHD1-205ENST00000581383 UCMAQ8WVF2 138 aa5.06□□□□□ -1.6
SMCHD1-205ENST00000581383 RAB40AQ8WXH6 277 aa5.06□□□□□ -1.6
SMCHD1-205ENST00000581383 SLC32A1Q9H598 525 aa5.06□□□□□ -1.6
SMCHD1-205ENST00000581383 EPHX3Q9H6B9 360 aa5.06□□□□□ -1.6
SMCHD1-205ENST00000581383 ZNF304Q9HCX3 659 aa5.06□□□□□ -1.6
SMCHD1-205ENST00000581383 SLC25A10Q9UBX3 287 aaPredicted RBP5.06□□□□□ -1.6
SMCHD1-205ENST00000581383 DHDHQ9UQ10 334 aa5.06□□□□□ -1.6
SMCHD1-205ENST00000581383 CAMK2AQ9UQM7 478 aa5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms