RNA–Protein interactions for RNA: ENST00000581265.1

RFFL-209, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 596 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-209ENST00000581265 ERBB2P04626 1255 aa10.87□□□□□ -0.67
RFFL-209ENST00000581265 SRCP12931 536 aa10.87□□□□□ -0.67
RFFL-209ENST00000581265 CLCN1P35523 988 aa10.87□□□□□ -0.67
RFFL-209ENST00000581265 KRT9P35527 623 aa10.87□□□□□ -0.67
RFFL-209ENST00000581265 EIF2S3P41091 472 aaKnown RBP10.87□□□□□ -0.67
RFFL-209ENST00000581265 CXCR3P49682 368 aa10.87□□□□□ -0.67
RFFL-209ENST00000581265 KRT83P78385 493 aa10.87□□□□□ -0.67
RFFL-209ENST00000581265 CCDC15Q0P6D6 951 aa10.87□□□□□ -0.67
RFFL-209ENST00000581265 PTPN20Q4JDL3 420 aa10.87□□□□□ -0.67
RFFL-209ENST00000581265 BRMS1LQ5PSV4 323 aa10.87□□□□□ -0.67
RFFL-209ENST00000581265 ACBD5Q5T8D3 534 aaPredicted RBP10.87□□□□□ -0.67
RFFL-209ENST00000581265 PIP5KL1Q5T9C9 394 aa10.87□□□□□ -0.67
RFFL-209ENST00000581265 HES3Q5TGS1 186 aa10.87□□□□□ -0.67
RFFL-209ENST00000581265 CREBRFQ8IUR6 639 aa10.87□□□□□ -0.67
RFFL-209ENST00000581265 PASD1Q8IV76 773 aa10.87□□□□□ -0.67
RFFL-209ENST00000581265 ZNF683Q8IZ20 524 aa10.87□□□□□ -0.67
RFFL-209ENST00000581265 SLC25A45Q8N413 288 aa10.87□□□□□ -0.67
RFFL-209ENST00000581265 TMEM145Q8NBT3 493 aa10.87□□□□□ -0.67
RFFL-209ENST00000581265 C1orf131Q8NDD1 294 aaKnown RBP10.87□□□□□ -0.67
RFFL-209ENST00000581265 TMIEQ8NEW7 156 aa10.87□□□□□ -0.67
RFFL-209ENST00000581265 OR2A12Q8NGT7 310 aa10.87□□□□□ -0.67
RFFL-209ENST00000581265 RFFLQ8WZ73 363 aa10.87□□□□□ -0.67
RFFL-209ENST00000581265 PGAP3Q96FM1 320 aaPredicted RBP10.87□□□□□ -0.67
RFFL-209ENST00000581265 KLHDC7BQ96G42 594 aa10.87□□□□□ -0.67
RFFL-209ENST00000581265 C1orf74Q96LT6 269 aa10.87□□□□□ -0.67
RFFL-209ENST00000581265 C2orf49Q9BVC5 232 aaPredicted RBP10.87□□□□□ -0.67
RFFL-209ENST00000581265 SIK2Q9H0K1 926 aa10.87□□□□□ -0.67
RFFL-209ENST00000581265 WDCPQ9H6R7 721 aa10.87□□□□□ -0.67
RFFL-209ENST00000581265 SIX2Q9NPC8 291 aa10.87□□□□□ -0.67
RFFL-209ENST00000581265 PIGVQ9NUD9 493 aa10.87□□□□□ -0.67
RFFL-209ENST00000581265 ARHGEF38Q9NXL2 777 aa10.87□□□□□ -0.67
RFFL-209ENST00000581265 KIAA1468Q9P260 1216 aa10.87□□□□□ -0.67
RFFL-209ENST00000581265 FARP1Q9Y4F1 1045 aaPredicted RBP10.87□□□□□ -0.67
RFFL-209ENST00000581265 DOCK9Q9BZ29 2069 aa10.87□□□□□ -0.67
RFFL-209ENST00000581265 PYCARD-AS1I3L0S3 204 aa10.86□□□□□ -0.67
RFFL-209ENST00000581265 I6L893 689 aaPredicted RBP10.86□□□□□ -0.67
RFFL-209ENST00000581265 TRIM38O00635 465 aa10.86□□□□□ -0.67
RFFL-209ENST00000581265 CNTN5O94779 1100 aa10.86□□□□□ -0.67
RFFL-209ENST00000581265 ADCY5O95622 1261 aa10.86□□□□□ -0.67
RFFL-209ENST00000581265 F9P00740 461 aa10.86□□□□□ -0.67
RFFL-209ENST00000581265 CTSLP07711 333 aa10.86□□□□□ -0.67
RFFL-209ENST00000581265 ACP1P24666 158 aa10.86□□□□□ -0.67
RFFL-209ENST00000581265 CHRNA3P32297 505 aa10.86□□□□□ -0.67
RFFL-209ENST00000581265 CLCN6P51797 869 aa10.86□□□□□ -0.67
RFFL-209ENST00000581265 CLDN6P56747 220 aa10.86□□□□□ -0.67
RFFL-209ENST00000581265 BPIFB4P59827 614 aa10.86□□□□□ -0.67
RFFL-209ENST00000581265 CXADRP78310 365 aa10.86□□□□□ -0.67
RFFL-209ENST00000581265 E2F1Q01094 437 aa10.86□□□□□ -0.67
RFFL-209ENST00000581265 ZNF211Q13398 564 aaPredicted RBP10.86□□□□□ -0.67
RFFL-209ENST00000581265 PROX2Q3B8N5 592 aa10.86□□□□□ -0.67
RFFL-209ENST00000581265 POM121L1PQ3SYA9 428 aa10.86□□□□□ -0.67
RFFL-209ENST00000581265 ALFQ53S48 1182 aa10.86□□□□□ -0.67
RFFL-209ENST00000581265 OTUD1Q5VV17 481 aaPredicted RBP10.86□□□□□ -0.67
RFFL-209ENST00000581265 SETD3Q86TU7 594 aaPredicted RBP10.86□□□□□ -0.67
RFFL-209ENST00000581265 SLC47A2Q86VL8 602 aa10.86□□□□□ -0.67
RFFL-209ENST00000581265 FAM71AQ8IYT1 594 aa10.86□□□□□ -0.67
RFFL-209ENST00000581265 FAM181AQ8N9Y4 354 aa10.86□□□□□ -0.67
RFFL-209ENST00000581265 ATP11CQ8NB49 1132 aa10.86□□□□□ -0.67
RFFL-209ENST00000581265 CCDC114Q96M63 670 aa10.86□□□□□ -0.67
RFFL-209ENST00000581265 PSMB7Q99436 277 aa10.86□□□□□ -0.67
RFFL-209ENST00000581265 TKTL2Q9H0I9 626 aa10.86□□□□□ -0.67
RFFL-209ENST00000581265 MUC3BQ9H195 1237 aa10.86□□□□□ -0.67
RFFL-209ENST00000581265 SYNCQ9H7C4 482 aa10.86□□□□□ -0.67
RFFL-209ENST00000581265 ANLNQ9NQW6 1124 aa10.86□□□□□ -0.67
RFFL-209ENST00000581265 KLHL11Q9NVR0 708 aa10.86□□□□□ -0.67
RFFL-209ENST00000581265 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP10.86□□□□□ -0.67
RFFL-209ENST00000581265 DNAJC12Q9UKB3 198 aa10.86□□□□□ -0.67
RFFL-209ENST00000581265 PAXBP1Q9Y5B6 917 aa10.86□□□□□ -0.67
RFFL-209ENST00000581265 PTPRQQ9UMZ3 2332 aa10.86□□□□□ -0.67
RFFL-209ENST00000581265 TP53BP1Q12888 1972 aaPredicted RBP10.85□□□□□ -0.67
RFFL-209ENST00000581265 IGLV3-10A0A075B6K4 115 aa10.85□□□□□ -0.67
RFFL-209ENST00000581265 A0A0D9SEW6 157 aa10.85□□□□□ -0.67
RFFL-209ENST00000581265 A0A1W2PQU0 124 aa10.85□□□□□ -0.67
RFFL-209ENST00000581265 K7ERQ8 282 aa10.85□□□□□ -0.67
RFFL-209ENST00000581265 KPNA3O00505 521 aaPredicted RBP10.85□□□□□ -0.67
RFFL-209ENST00000581265 SLC31A1O15431 190 aa10.85□□□□□ -0.67
RFFL-209ENST00000581265 SMAD6O43541 496 aaKnown RBP10.85□□□□□ -0.67
RFFL-209ENST00000581265 SIGLEC6O43699 453 aa10.85□□□□□ -0.67
RFFL-209ENST00000581265 BNIP3LO60238 219 aa10.85□□□□□ -0.67
RFFL-209ENST00000581265 SNAP91O60641 907 aa10.85□□□□□ -0.67
RFFL-209ENST00000581265 WISP1O95388 367 aa10.85□□□□□ -0.67
RFFL-209ENST00000581265 PRNPP04156 253 aa10.85□□□□□ -0.67
RFFL-209ENST00000581265 THEGLP0DJG4 465 aa10.85□□□□□ -0.67
RFFL-209ENST00000581265 TFE3P19532 575 aaPredicted RBP10.85□□□□□ -0.67
RFFL-209ENST00000581265 CDH5P33151 784 aaPredicted RBP10.85□□□□□ -0.67
RFFL-209ENST00000581265 SCNN1AP37088 669 aa10.85□□□□□ -0.67
RFFL-209ENST00000581265 GGCXP38435 758 aa10.85□□□□□ -0.67
RFFL-209ENST00000581265 GABRB2P47870 512 aa10.85□□□□□ -0.67
RFFL-209ENST00000581265 SLC20A2Q08357 652 aa10.85□□□□□ -0.67
RFFL-209ENST00000581265 KCNMA1Q12791 1236 aa10.85□□□□□ -0.67
RFFL-209ENST00000581265 ZNF284Q2VY69 593 aa10.85□□□□□ -0.67
RFFL-209ENST00000581265 SLC25A52Q3SY17 297 aa10.85□□□□□ -0.67
RFFL-209ENST00000581265 ARTNQ5T4W7 220 aa10.85□□□□□ -0.67
RFFL-209ENST00000581265 DPY19L2P1Q6NXN4 242 aa10.85□□□□□ -0.67
RFFL-209ENST00000581265 LRRC31Q6UY01 552 aa10.85□□□□□ -0.67
RFFL-209ENST00000581265 HORMAD1Q86X24 394 aa10.85□□□□□ -0.67
RFFL-209ENST00000581265 DCBLD1Q8N8Z6 715 aa10.85□□□□□ -0.67
RFFL-209ENST00000581265 DCAF4L2Q8NA75 395 aa10.85□□□□□ -0.67
RFFL-209ENST00000581265 HDAC8Q9BY41 377 aa10.85□□□□□ -0.67
RFFL-209ENST00000581265 VPS51Q9UID3 782 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms