RNA–Protein interactions for RNA: ENST00000580799.2

GGA3-210, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5

Gene GGA3, Length 521 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-210ENST00000580799 OR2A12Q8NGT7 310 aa10.54□□□□□ -0.72
GGA3-210ENST00000580799 ZNF578Q96N58 590 aaPredicted RBP10.54□□□□□ -0.72
GGA3-210ENST00000580799 DEPDC7Q96QD5 511 aa10.54□□□□□ -0.72
GGA3-210ENST00000580799 CPXM1Q96SM3 734 aa10.54□□□□□ -0.72
GGA3-210ENST00000580799 ACP6Q9NPH0 428 aa10.54□□□□□ -0.72
GGA3-210ENST00000580799 DYRK4Q9NR20 520 aa10.54□□□□□ -0.72
GGA3-210ENST00000580799 RRN3Q9NYV6 651 aa10.54□□□□□ -0.72
GGA3-210ENST00000580799 NLGN3Q9NZ94 848 aa10.54□□□□□ -0.72
GGA3-210ENST00000580799 COX16Q9P0S2 106 aa10.54□□□□□ -0.72
GGA3-210ENST00000580799 PCDHGC3Q9UN70 934 aa10.54□□□□□ -0.72
GGA3-210ENST00000580799 CTNND2Q9UQB3 1225 aa10.54□□□□□ -0.72
GGA3-210ENST00000580799 PAXBP1Q9Y5B6 917 aa10.54□□□□□ -0.72
GGA3-210ENST00000580799 HS3ST4Q9Y661 456 aa10.54□□□□□ -0.72
GGA3-210ENST00000580799 BPTFQ12830 3046 aa10.54□□□□□ -0.72
GGA3-210ENST00000580799 KNTC1P50748 2209 aa10.53□□□□□ -0.72
GGA3-210ENST00000580799 BECN2A8MW95 431 aa10.53□□□□□ -0.72
GGA3-210ENST00000580799 M0QYT0 321 aa10.53□□□□□ -0.72
GGA3-210ENST00000580799 RIOK3O14730 519 aaKnown RBP10.53□□□□□ -0.72
GGA3-210ENST00000580799 SLC31A1O15431 190 aa10.53□□□□□ -0.72
GGA3-210ENST00000580799 BNIP3LO60238 219 aa10.53□□□□□ -0.72
GGA3-210ENST00000580799 OPA1O60313 960 aa10.53□□□□□ -0.72
GGA3-210ENST00000580799 DAB1O75553 588 aa10.53□□□□□ -0.72
GGA3-210ENST00000580799 PIAS2O75928 621 aa10.53□□□□□ -0.72
GGA3-210ENST00000580799 C1QL1O75973 258 aa10.53□□□□□ -0.72
GGA3-210ENST00000580799 DXOO77932 396 aaKnown RBP10.53□□□□□ -0.72
GGA3-210ENST00000580799 PRB1P04280 392 aa10.53□□□□□ -0.72
GGA3-210ENST00000580799 PRLRP16471 622 aa10.53□□□□□ -0.72
GGA3-210ENST00000580799 BMP6P22004 513 aa10.53□□□□□ -0.72
GGA3-210ENST00000580799 CHRNA3P32297 505 aa10.53□□□□□ -0.72
GGA3-210ENST00000580799 NOS2P35228 1153 aa10.53□□□□□ -0.72
GGA3-210ENST00000580799 USP8P40818 1118 aa10.53□□□□□ -0.72
GGA3-210ENST00000580799 DUSP3P51452 185 aaPredicted RBP10.53□□□□□ -0.72
GGA3-210ENST00000580799 IRAK1P51617 712 aa10.53□□□□□ -0.72
GGA3-210ENST00000580799 UCNP55089 124 aa10.53□□□□□ -0.72
GGA3-210ENST00000580799 PCBP4P57723 403 aaKnown RBP10.53□□□□□ -0.72
GGA3-210ENST00000580799 PTK2Q05397 1052 aa10.53□□□□□ -0.72
GGA3-210ENST00000580799 CCDC173Q0VFZ6 552 aa10.53□□□□□ -0.72
GGA3-210ENST00000580799 MORC3Q14149 939 aa10.53□□□□□ -0.72
GGA3-210ENST00000580799 ZNF284Q2VY69 593 aa10.53□□□□□ -0.72
GGA3-210ENST00000580799 BRMS1LQ5PSV4 323 aa10.53□□□□□ -0.72
GGA3-210ENST00000580799 OLFML1Q6UWY5 402 aa10.53□□□□□ -0.72
GGA3-210ENST00000580799 ABI3BPQ7Z7G0 1075 aa10.53□□□□□ -0.72
GGA3-210ENST00000580799 SETD3Q86TU7 594 aaPredicted RBP10.53□□□□□ -0.72
GGA3-210ENST00000580799 ZDHHC17Q8IUH5 632 aa10.53□□□□□ -0.72
GGA3-210ENST00000580799 SPACA3Q8IXA5 215 aa10.53□□□□□ -0.72
GGA3-210ENST00000580799 WDTC1Q8N5D0 677 aa10.53□□□□□ -0.72
GGA3-210ENST00000580799 DCAF4L2Q8NA75 395 aa10.53□□□□□ -0.72
GGA3-210ENST00000580799 OR13H1Q8NG92 308 aa10.53□□□□□ -0.72
GGA3-210ENST00000580799 SHC3Q92529 594 aa10.53□□□□□ -0.72
GGA3-210ENST00000580799 PPP1R16AQ96I34 528 aa10.53□□□□□ -0.72
GGA3-210ENST00000580799 LGMNQ99538 433 aa10.53□□□□□ -0.72
GGA3-210ENST00000580799 DUSP23Q9BVJ7 150 aa10.53□□□□□ -0.72
GGA3-210ENST00000580799 SRRTQ9BXP5 876 aaKnown RBP10.53□□□□□ -0.72
GGA3-210ENST00000580799 CALN1Q9BXU9 219 aa10.53□□□□□ -0.72
GGA3-210ENST00000580799 HDAC8Q9BY41 377 aa10.53□□□□□ -0.72
GGA3-210ENST00000580799 SIK2Q9H0K1 926 aa10.53□□□□□ -0.72
GGA3-210ENST00000580799 APEX2Q9UBZ4 518 aa10.53□□□□□ -0.72
GGA3-210ENST00000580799 CA5BQ9Y2D0 317 aa10.53□□□□□ -0.72
GGA3-210ENST00000580799 ARID1BQ8NFD5 2236 aaPredicted RBP10.53□□□□□ -0.72
GGA3-210ENST00000580799 CFAP46Q8IYW2 2715 aa10.52□□□□□ -0.72
GGA3-210ENST00000580799 A6NNZ2 444 aa10.52□□□□□ -0.73
GGA3-210ENST00000580799 ERVH48-1M5A8F1 160 aa10.52□□□□□ -0.73
GGA3-210ENST00000580799 FFAR2O15552 330 aa10.52□□□□□ -0.73
GGA3-210ENST00000580799 LZTS3O60299 673 aaPredicted RBP10.52□□□□□ -0.73
GGA3-210ENST00000580799 GRAP2O75791 330 aa10.52□□□□□ -0.73
GGA3-210ENST00000580799 PCDH8O95206 1070 aa10.52□□□□□ -0.73
GGA3-210ENST00000580799 MT-CO1P00395 513 aa10.52□□□□□ -0.73
GGA3-210ENST00000580799 F9P00740 461 aa10.52□□□□□ -0.73
GGA3-210ENST00000580799 CTSLP07711 333 aa10.52□□□□□ -0.73
GGA3-210ENST00000580799 RHOCP08134 193 aa10.52□□□□□ -0.73
GGA3-210ENST00000580799 RECQLP46063 649 aaPredicted RBP10.52□□□□□ -0.73
GGA3-210ENST00000580799 CXCR3P49682 368 aa10.52□□□□□ -0.73
GGA3-210ENST00000580799 TMPRSS3P57727 454 aa10.52□□□□□ -0.73
GGA3-210ENST00000580799 ERVPABLB-1P60509 514 aa10.52□□□□□ -0.73
GGA3-210ENST00000580799 HNRNPKP61978 463 aaKnown RBP eCLIP10.52□□□□□ -0.73
GGA3-210ENST00000580799 SLC6A3Q01959 620 aa10.52□□□□□ -0.73
GGA3-210ENST00000580799 TMEM259Q4ZIN3 620 aa10.52□□□□□ -0.73
GGA3-210ENST00000580799 BROXQ5VW32 411 aa10.52□□□□□ -0.73
GGA3-210ENST00000580799 CDCP2Q5VXM1 449 aa10.52□□□□□ -0.73
GGA3-210ENST00000580799 OR6B2Q6IFH4 312 aa10.52□□□□□ -0.73
GGA3-210ENST00000580799 LRRC31Q6UY01 552 aa10.52□□□□□ -0.73
GGA3-210ENST00000580799 GBP6Q6ZN66 633 aa10.52□□□□□ -0.73
GGA3-210ENST00000580799 FAM183BPQ6ZVS7 135 aa10.52□□□□□ -0.73
GGA3-210ENST00000580799 ERN2Q76MJ5 926 aaKnown RBP10.52□□□□□ -0.73
GGA3-210ENST00000580799 TMC6Q7Z403 805 aa10.52□□□□□ -0.73
GGA3-210ENST00000580799 ZNF605Q86T29 641 aa10.52□□□□□ -0.73
GGA3-210ENST00000580799 ZSCAN30Q86W11 494 aa10.52□□□□□ -0.73
GGA3-210ENST00000580799 FAM181AQ8N9Y4 354 aa10.52□□□□□ -0.73
GGA3-210ENST00000580799 C1orf131Q8NDD1 294 aaKnown RBP10.52□□□□□ -0.73
GGA3-210ENST00000580799 ZNF397Q8NF99 534 aaPredicted RBP10.52□□□□□ -0.73
GGA3-210ENST00000580799 HIC2Q96JB3 615 aa10.52□□□□□ -0.73
GGA3-210ENST00000580799 APOLD1Q96LR9 279 aa10.52□□□□□ -0.73
GGA3-210ENST00000580799 C1orf74Q96LT6 269 aa10.52□□□□□ -0.73
GGA3-210ENST00000580799 PSMB7Q99436 277 aa10.52□□□□□ -0.73
GGA3-210ENST00000580799 MYOCQ99972 504 aa10.52□□□□□ -0.73
GGA3-210ENST00000580799 ABCG4Q9H172 646 aa10.52□□□□□ -0.73
GGA3-210ENST00000580799 WDCPQ9H6R7 721 aa10.52□□□□□ -0.73
GGA3-210ENST00000580799 SYNCQ9H7C4 482 aa10.52□□□□□ -0.73
GGA3-210ENST00000580799 UCKL1Q9NWZ5 548 aa10.52□□□□□ -0.73
GGA3-210ENST00000580799 ARHGEF38Q9NXL2 777 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms