RNA–Protein interactions for RNA: ENST00000580751.5

SS18-216, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-216ENST00000580751 VPS51Q9UID3 782 aa15.86■□□□□ 0.13
SS18-216ENST00000580751 ERVW-1Q9UQF0 538 aa15.86■□□□□ 0.13
SS18-216ENST00000580751 STON1Q9Y6Q2 735 aa15.86■□□□□ 0.13
SS18-216ENST00000580751 MYO18AQ92614 2054 aaKnown RBP15.86■□□□□ 0.13
SS18-216ENST00000580751 ATG2BQ96BY7 2078 aa15.86■□□□□ 0.13
SS18-216ENST00000580751 CHD5Q8TDI0 1954 aa15.86■□□□□ 0.13
SS18-216ENST00000580751 ANTXRLA6NF34 631 aa15.85■□□□□ 0.13
SS18-216ENST00000580751 ZSCAN5CA6NGD5 496 aaPredicted RBP15.85■□□□□ 0.13
SS18-216ENST00000580751 ARHGAP42A6NI28 874 aa15.85■□□□□ 0.13
SS18-216ENST00000580751 RASA4BC9J798 803 aa15.85■□□□□ 0.13
SS18-216ENST00000580751 CBX4O00257 560 aa15.85■□□□□ 0.13
SS18-216ENST00000580751 RASA4O43374 803 aa15.85■□□□□ 0.13
SS18-216ENST00000580751 ZNF189O75820 626 aaPredicted RBP15.85■□□□□ 0.13
SS18-216ENST00000580751 PAPSS2O95340 614 aaPredicted RBP15.85■□□□□ 0.13
SS18-216ENST00000580751 HOXB2P14652 356 aa15.85■□□□□ 0.13
SS18-216ENST00000580751 ZFXP17010 805 aaPredicted RBP15.85■□□□□ 0.13
SS18-216ENST00000580751 CXCL12P48061 93 aa15.85■□□□□ 0.13
SS18-216ENST00000580751 VASPP50552 380 aaPredicted RBP15.85■□□□□ 0.13
SS18-216ENST00000580751 GEMIN4P57678 1058 aaKnown RBP15.85■□□□□ 0.13
SS18-216ENST00000580751 ENPP2Q13822 863 aa15.85■□□□□ 0.13
SS18-216ENST00000580751 STARD3Q14849 445 aa15.85■□□□□ 0.13
SS18-216ENST00000580751 AFMIDQ63HM1 303 aa15.85■□□□□ 0.13
SS18-216ENST00000580751 ZNF354CQ86Y25 554 aa15.85■□□□□ 0.13
SS18-216ENST00000580751 NPWQ8N729 165 aa15.85■□□□□ 0.13
SS18-216ENST00000580751 SPATA4Q8NEY3 305 aa15.85■□□□□ 0.13
SS18-216ENST00000580751 PCDH19Q8TAB3 1148 aa15.85■□□□□ 0.13
SS18-216ENST00000580751 RNF25Q96BH1 459 aaPredicted RBP15.85■□□□□ 0.13
SS18-216ENST00000580751 HMCESQ96FZ2 354 aa15.85■□□□□ 0.13
SS18-216ENST00000580751 CAPZA3Q96KX2 299 aa15.85■□□□□ 0.13
SS18-216ENST00000580751 MRGPRX3Q96LB0 322 aa15.85■□□□□ 0.13
SS18-216ENST00000580751 RNF157Q96PX1 679 aa15.85■□□□□ 0.13
SS18-216ENST00000580751 ACOX2Q99424 681 aa15.85■□□□□ 0.13
SS18-216ENST00000580751 MAK16Q9BXY0 300 aaKnown RBP15.85■□□□□ 0.13
SS18-216ENST00000580751 KLC2Q9H0B6 622 aa15.85■□□□□ 0.13
SS18-216ENST00000580751 ZDHHC4Q9NPG8 344 aa15.85■□□□□ 0.13
SS18-216ENST00000580751 SLC8A2Q9UPR5 921 aa15.85■□□□□ 0.13
SS18-216ENST00000580751 hCG_1818297A0A087WSY0 165 aa15.84■□□□□ 0.13
SS18-216ENST00000580751 EFCAB8A8MWE9 144 aa15.84■□□□□ 0.13
SS18-216ENST00000580751 SGK1O00141 431 aa15.84■□□□□ 0.13
SS18-216ENST00000580751 LAMTOR5O43504 91 aa15.84■□□□□ 0.13
SS18-216ENST00000580751 SNAP91O60641 907 aa15.84■□□□□ 0.13
SS18-216ENST00000580751 ADAM23O75077 832 aa15.84■□□□□ 0.13
SS18-216ENST00000580751 ACVRL1P37023 503 aa15.84■□□□□ 0.13
SS18-216ENST00000580751 IL12RB1P42701 662 aa15.84■□□□□ 0.13
SS18-216ENST00000580751 CTSOP43234 321 aaPredicted RBP15.84■□□□□ 0.13
SS18-216ENST00000580751 NUMBP49757 651 aa15.84■□□□□ 0.13
SS18-216ENST00000580751 CLCN6P51797 869 aa15.84■□□□□ 0.13
SS18-216ENST00000580751 DGKEP52429 567 aa15.84■□□□□ 0.13
SS18-216ENST00000580751 TERF1P54274 439 aa15.84■□□□□ 0.13
SS18-216ENST00000580751 SLC20A2Q08357 652 aa15.84■□□□□ 0.13
SS18-216ENST00000580751 KLF1Q13351 362 aaPredicted RBP15.84■□□□□ 0.13
SS18-216ENST00000580751 ZNF211Q13398 564 aaPredicted RBP15.84■□□□□ 0.13
SS18-216ENST00000580751 SERINC3Q13530 473 aa15.84■□□□□ 0.13
SS18-216ENST00000580751 CRY1Q16526 586 aa15.84■□□□□ 0.13
SS18-216ENST00000580751 MFSD7Q6UXD7 560 aa15.84■□□□□ 0.13
SS18-216ENST00000580751 BBS12Q6ZW61 710 aa15.84■□□□□ 0.13
SS18-216ENST00000580751 C1orf210Q8IVY1 113 aa15.84■□□□□ 0.13
SS18-216ENST00000580751 CELF6Q96J87 481 aaKnown RBP15.84■□□□□ 0.13
SS18-216ENST00000580751 CARD6Q9BX69 1037 aa15.84■□□□□ 0.13
SS18-216ENST00000580751 TMEM245Q9H330 911 aa15.84■□□□□ 0.13
SS18-216ENST00000580751 PRMT8Q9NR22 394 aaPredicted RBP15.84■□□□□ 0.13
SS18-216ENST00000580751 ETNK2Q9NVF9 386 aa15.84■□□□□ 0.13
SS18-216ENST00000580751 HS3ST2Q9Y278 367 aa15.84■□□□□ 0.13
SS18-216ENST00000580751 DFFAO00273 331 aa15.83■□□□□ 0.12
SS18-216ENST00000580751 PDE2AO00408 941 aaPredicted RBP15.83■□□□□ 0.12
SS18-216ENST00000580751 KRIT1O00522 736 aa15.83■□□□□ 0.12
SS18-216ENST00000580751 RIOK3O14730 519 aaKnown RBP15.83■□□□□ 0.12
SS18-216ENST00000580751 KDELR3O43731 214 aa15.83■□□□□ 0.12
SS18-216ENST00000580751 SYNCRIPO60506 623 aaKnown RBP15.83■□□□□ 0.12
SS18-216ENST00000580751 ZMPSTE24O75844 475 aa15.83■□□□□ 0.12
SS18-216ENST00000580751 EPHX1P07099 455 aa15.83■□□□□ 0.12
SS18-216ENST00000580751 PRKCHP24723 683 aa15.83■□□□□ 0.12
SS18-216ENST00000580751 WASP42768 502 aa15.83■□□□□ 0.12
SS18-216ENST00000580751 STK19P49842 368 aaPredicted RBP15.83■□□□□ 0.12
SS18-216ENST00000580751 SERPINH1P50454 418 aaKnown RBP15.83■□□□□ 0.12
SS18-216ENST00000580751 PAFAH1B3Q15102 231 aaKnown RBP15.83■□□□□ 0.12
SS18-216ENST00000580751 CYP1B1Q16678 543 aa15.83■□□□□ 0.12
SS18-216ENST00000580751 NCBP2-AS2Q69YL0 99 aa15.83■□□□□ 0.12
SS18-216ENST00000580751 DRICH1Q6PGQ1 229 aaPredicted RBP15.83■□□□□ 0.12
SS18-216ENST00000580751 METTL3Q86U44 580 aaKnown RBP15.83■□□□□ 0.12
SS18-216ENST00000580751 RFX6Q8HWS3 928 aa15.83■□□□□ 0.12
SS18-216ENST00000580751 ARHGAP12Q8IWW6 846 aa15.83■□□□□ 0.12
SS18-216ENST00000580751 PQLC3Q8N755 202 aa15.83■□□□□ 0.12
SS18-216ENST00000580751 MYO19Q96H55 970 aa15.83■□□□□ 0.12
SS18-216ENST00000580751 MS4A14Q96JA4 679 aa15.83■□□□□ 0.12
SS18-216ENST00000580751 RPL10LQ96L21 214 aaKnown RBP15.83■□□□□ 0.12
SS18-216ENST00000580751 SLC39A8Q9C0K1 460 aa15.83■□□□□ 0.12
SS18-216ENST00000580751 POLMQ9NP87 494 aaPredicted RBP15.83■□□□□ 0.12
SS18-216ENST00000580751 FEZ2Q9UHY8 353 aaPredicted RBP15.83■□□□□ 0.12
SS18-216ENST00000580751 MFHAS1Q9Y4C4 1052 aa15.83■□□□□ 0.12
SS18-216ENST00000580751 CACNA1IQ9P0X4 2223 aa15.83■□□□□ 0.12
SS18-216ENST00000580751 CACNA1HO95180 2353 aa15.82■□□□□ 0.12
SS18-216ENST00000580751 APOL1O14791 398 aa15.82■□□□□ 0.12
SS18-216ENST00000580751 ATP9BO43861 1147 aa15.82■□□□□ 0.12
SS18-216ENST00000580751 MFSD11O43934 449 aa15.82■□□□□ 0.12
SS18-216ENST00000580751 TGM2P21980 687 aa15.82■□□□□ 0.12
SS18-216ENST00000580751 GLDCP23378 1020 aa15.82■□□□□ 0.12
SS18-216ENST00000580751 CHRNA3P32297 505 aa15.82■□□□□ 0.12
SS18-216ENST00000580751 NR2C2P49116 596 aa15.82■□□□□ 0.12
SS18-216ENST00000580751 PAPOLAP51003 745 aaKnown RBP15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms