RNA–Protein interactions for RNA: ENST00000580541.1

SKA2-205, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3 BASIC

Gene SKA2, Length 689 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-205ENST00000580541 SUN2Q9UH99 717 aa14.58□□□□□ -0.08
SKA2-205ENST00000580541 AMACRQ9UHK6 382 aa14.58□□□□□ -0.08
SKA2-205ENST00000580541 VPS51Q9UID3 782 aa14.58□□□□□ -0.08
SKA2-205ENST00000580541 INTS6Q9UL03 887 aaKnown RBP14.58□□□□□ -0.08
SKA2-205ENST00000580541 ERVW-1Q9UQF0 538 aa14.58□□□□□ -0.08
SKA2-205ENST00000580541 ZNF148Q9UQR1 794 aa14.58□□□□□ -0.08
SKA2-205ENST00000580541 DRG1Q9Y295 367 aaKnown RBP14.58□□□□□ -0.08
SKA2-205ENST00000580541 FARP1Q9Y4F1 1045 aaPredicted RBP14.58□□□□□ -0.08
SKA2-205ENST00000580541 MIA3Q5JRA6 1907 aa14.57□□□□□ -0.08
SKA2-205ENST00000580541 CCDC188H7C350 402 aa14.57□□□□□ -0.08
SKA2-205ENST00000580541 ATG13O75143 517 aa14.57□□□□□ -0.08
SKA2-205ENST00000580541 HNRNPLP14866 589 aaKnown RBP eCLIP14.57□□□□□ -0.08
SKA2-205ENST00000580541 PECAM1P16284 738 aaPredicted RBP14.57□□□□□ -0.08
SKA2-205ENST00000580541 CES1P23141 567 aa14.57□□□□□ -0.08
SKA2-205ENST00000580541 HSPA9P38646 679 aaKnown RBP14.57□□□□□ -0.08
SKA2-205ENST00000580541 FNDC3BQ53EP0 1204 aaKnown RBP14.57□□□□□ -0.08
SKA2-205ENST00000580541 SLC45A4Q5BKX6 768 aa14.57□□□□□ -0.08
SKA2-205ENST00000580541 MARC1Q5VT66 337 aa14.57□□□□□ -0.08
SKA2-205ENST00000580541 TXNDC11Q6PKC3 985 aa14.57□□□□□ -0.08
SKA2-205ENST00000580541 NPNTQ6UXI9 565 aa14.57□□□□□ -0.08
SKA2-205ENST00000580541 GRK7Q8WTQ7 553 aa14.57□□□□□ -0.08
SKA2-205ENST00000580541 MAGOHBQ96A72 148 aaKnown RBP14.57□□□□□ -0.08
SKA2-205ENST00000580541 NECAB3Q96P71 396 aaPredicted RBP14.57□□□□□ -0.08
SKA2-205ENST00000580541 CEP44Q9C0F1 390 aa14.57□□□□□ -0.08
SKA2-205ENST00000580541 SEPT3Q9UH03 358 aa14.57□□□□□ -0.08
SKA2-205ENST00000580541 NDRG2Q9UN36 371 aaKnown RBP14.57□□□□□ -0.08
SKA2-205ENST00000580541 HS3ST2Q9Y278 367 aa14.57□□□□□ -0.08
SKA2-205ENST00000580541 MFHAS1Q9Y4C4 1052 aa14.57□□□□□ -0.08
SKA2-205ENST00000580541 MYO18AQ92614 2054 aaKnown RBP14.56□□□□□ -0.08
SKA2-205ENST00000580541 BCLAF3A2AJT9 711 aaKnown RBP14.56□□□□□ -0.08
SKA2-205ENST00000580541 KRBA1A5PL33 1030 aa14.56□□□□□ -0.08
SKA2-205ENST00000580541 FAM170BA6NMN3 283 aa14.56□□□□□ -0.08
SKA2-205ENST00000580541 PRRT4C9JH25 899 aa14.56□□□□□ -0.08
SKA2-205ENST00000580541 K7EQS6 105 aa14.56□□□□□ -0.08
SKA2-205ENST00000580541 TRIM24O15164 1050 aa14.56□□□□□ -0.08
SKA2-205ENST00000580541 ZBTB24O43167 697 aaPredicted RBP14.56□□□□□ -0.08
SKA2-205ENST00000580541 ZMPSTE24O75844 475 aa14.56□□□□□ -0.08
SKA2-205ENST00000580541 ITGAVP06756 1048 aa14.56□□□□□ -0.08
SKA2-205ENST00000580541 CCNB1P14635 433 aa14.56□□□□□ -0.08
SKA2-205ENST00000580541 CHRNA3P32297 505 aa14.56□□□□□ -0.08
SKA2-205ENST00000580541 RECQLP46063 649 aaPredicted RBP14.56□□□□□ -0.08
SKA2-205ENST00000580541 UBXN2BQ14CS0 331 aa14.56□□□□□ -0.08
SKA2-205ENST00000580541 ACCSLQ4AC99 568 aa14.56□□□□□ -0.08
SKA2-205ENST00000580541 FSTL4Q6MZW2 842 aa14.56□□□□□ -0.08
SKA2-205ENST00000580541 C4orf22Q6V702 233 aa14.56□□□□□ -0.08
SKA2-205ENST00000580541 ZNF513Q8N8E2 541 aaPredicted RBP14.56□□□□□ -0.08
SKA2-205ENST00000580541 ATL2Q8NHH9 583 aa14.56□□□□□ -0.08
SKA2-205ENST00000580541 HTR3CQ8WXA8 447 aa14.56□□□□□ -0.08
SKA2-205ENST00000580541 NKD2Q969F2 451 aaPredicted RBP14.56□□□□□ -0.08
SKA2-205ENST00000580541 ISG20Q96AZ6 181 aaKnown RBP14.56□□□□□ -0.08
SKA2-205ENST00000580541 LGMNQ99538 433 aa14.56□□□□□ -0.08
SKA2-205ENST00000580541 FBRSL1Q9HCM7 1045 aaKnown RBP14.56□□□□□ -0.08
SKA2-205ENST00000580541 THAP10Q9P2Z0 257 aaPredicted RBP14.56□□□□□ -0.08
SKA2-205ENST00000580541 TRHDEQ9UKU6 1024 aa14.56□□□□□ -0.08
SKA2-205ENST00000580541 TCRBV7S2A1N4TA0A589 114 aa14.55□□□□□ -0.08
SKA2-205ENST00000580541 J3KR12 359 aa14.55□□□□□ -0.08
SKA2-205ENST00000580541 LIASO43766 372 aa14.55□□□□□ -0.08
SKA2-205ENST00000580541 ATP9BO43861 1147 aa14.55□□□□□ -0.08
SKA2-205ENST00000580541 SNAP91O60641 907 aa14.55□□□□□ -0.08
SKA2-205ENST00000580541 EGFP01133 1207 aa14.55□□□□□ -0.08
SKA2-205ENST00000580541 NTSR1P30989 418 aa14.55□□□□□ -0.08
SKA2-205ENST00000580541 MAGEA9P43362 315 aa14.55□□□□□ -0.08
SKA2-205ENST00000580541 SERPINH1P50454 418 aaKnown RBP14.55□□□□□ -0.08
SKA2-205ENST00000580541 ARF5P84085 180 aa14.55□□□□□ -0.08
SKA2-205ENST00000580541 RAD51Q06609 339 aa14.55□□□□□ -0.08
SKA2-205ENST00000580541 NSUN2Q08J23 767 aaKnown RBP eCLIP14.55□□□□□ -0.08
SKA2-205ENST00000580541 CCINQ13939 588 aa14.55□□□□□ -0.08
SKA2-205ENST00000580541 ZNF235Q14590 738 aa14.55□□□□□ -0.08
SKA2-205ENST00000580541 LBRQ14739 615 aaKnown RBP14.55□□□□□ -0.08
SKA2-205ENST00000580541 PRKD1Q15139 912 aaPredicted RBP14.55□□□□□ -0.08
SKA2-205ENST00000580541 EOGTQ5NDL2 527 aa14.55□□□□□ -0.08
SKA2-205ENST00000580541 TMEM215Q68D42 235 aa14.55□□□□□ -0.08
SKA2-205ENST00000580541 SERPINA13PQ6UXR4 307 aa14.55□□□□□ -0.08
SKA2-205ENST00000580541 TRIM67Q6ZTA4 783 aa14.55□□□□□ -0.08
SKA2-205ENST00000580541 GSTA5Q7RTV2 222 aa14.55□□□□□ -0.08
SKA2-205ENST00000580541 PLPP6Q8IY26 295 aa14.55□□□□□ -0.08
SKA2-205ENST00000580541 CCDC105Q8IYK2 499 aa14.55□□□□□ -0.08
SKA2-205ENST00000580541 CHPFQ8IZ52 775 aa14.55□□□□□ -0.08
SKA2-205ENST00000580541 SH2D3CQ8N5H7 860 aa14.55□□□□□ -0.08
SKA2-205ENST00000580541 PCDH20Q8N6Y1 951 aaKnown RBP14.55□□□□□ -0.08
SKA2-205ENST00000580541 CEP112Q8N8E3 955 aa14.55□□□□□ -0.08
SKA2-205ENST00000580541 SLC35B2Q8TB61 432 aa14.55□□□□□ -0.08
SKA2-205ENST00000580541 C1orf54Q8WWF1 131 aa14.55□□□□□ -0.08
SKA2-205ENST00000580541 RPL10LQ96L21 214 aaKnown RBP14.55□□□□□ -0.08
SKA2-205ENST00000580541 PPP1R2P1Q96PQ5 205 aa14.55□□□□□ -0.08
SKA2-205ENST00000580541 QKIQ96PU8 341 aaKnown RBP eCLIP14.55□□□□□ -0.082e-7■■■■□ 25.6
SKA2-205ENST00000580541 HERPUD2Q9BSE4 406 aa14.55□□□□□ -0.08
SKA2-205ENST00000580541 IER2Q9BTL4 223 aa14.55□□□□□ -0.08
SKA2-205ENST00000580541 CINPQ9BW66 212 aaPredicted RBP14.55□□□□□ -0.08
SKA2-205ENST00000580541 AP1M1Q9BXS5 423 aa14.55□□□□□ -0.08
SKA2-205ENST00000580541 TBC1D17Q9HA65 648 aa14.55□□□□□ -0.08
SKA2-205ENST00000580541 LMAN1LQ9HAT1 526 aa14.55□□□□□ -0.08
SKA2-205ENST00000580541 LTB4R2Q9NPC1 389 aa14.55□□□□□ -0.08
SKA2-205ENST00000580541 DNPEPQ9ULA0 475 aa14.55□□□□□ -0.08
SKA2-205ENST00000580541 SIT1Q9Y3P8 196 aa14.55□□□□□ -0.08
SKA2-205ENST00000580541 KIAA1549LQ6ZVL6 1849 aa14.55□□□□□ -0.08
SKA2-205ENST00000580541 TARSL2A2RTX5 802 aaKnown RBP14.54□□□□□ -0.08
SKA2-205ENST00000580541 SGK1O00141 431 aa14.54□□□□□ -0.08
SKA2-205ENST00000580541 FANCGO15287 622 aa14.54□□□□□ -0.08
SKA2-205ENST00000580541 SYNCRIPO60506 623 aaKnown RBP14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms