RNA–Protein interactions for RNA: ENST00000579061.5

SS18-212, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 3

Gene SS18, Length 646 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-212ENST00000579061 RNASEH2AO75792 299 aaKnown RBP15.18■□□□□ 0.02
SS18-212ENST00000579061 MT-CO1P00395 513 aa15.18■□□□□ 0.02
SS18-212ENST00000579061 SERPING1P05155 500 aa15.18■□□□□ 0.02
SS18-212ENST00000579061 HTR7P34969 479 aa15.18■□□□□ 0.02
SS18-212ENST00000579061 GALCP54803 685 aa15.18■□□□□ 0.02
SS18-212ENST00000579061 OGDHQ02218 1023 aa15.18■□□□□ 0.02
SS18-212ENST00000579061 TDRD12Q587J7 1177 aaKnown RBP15.18■□□□□ 0.02
SS18-212ENST00000579061 PPM1JQ5JR12 505 aa15.18■□□□□ 0.02
SS18-212ENST00000579061 KIAA0895LQ68EN5 471 aa15.18■□□□□ 0.02
SS18-212ENST00000579061 SCYL2Q6P3W7 929 aa15.18■□□□□ 0.02
SS18-212ENST00000579061 DRC7Q8IY82 874 aa15.18■□□□□ 0.02
SS18-212ENST00000579061 HDDC3Q8N4P3 179 aa15.18■□□□□ 0.02
SS18-212ENST00000579061 ZCCHC9Q8N567 271 aaKnown RBP15.18■□□□□ 0.02
SS18-212ENST00000579061 AADATQ8N5Z0 425 aa15.18■□□□□ 0.02
SS18-212ENST00000579061 BIRC7Q96CA5 298 aa15.18■□□□□ 0.02
SS18-212ENST00000579061 EIF3CQ99613 913 aaKnown RBP15.18■□□□□ 0.02
SS18-212ENST00000579061 EPAS1Q99814 870 aa15.18■□□□□ 0.02
SS18-212ENST00000579061 NCAPGQ9BPX3 1015 aa15.18■□□□□ 0.02
SS18-212ENST00000579061 MAGEB5Q9BZ81 275 aa15.18■□□□□ 0.02
SS18-212ENST00000579061 CEP44Q9C0F1 390 aa15.18■□□□□ 0.02
SS18-212ENST00000579061 MIR1-1HGQ9H1L0 117 aa15.18■□□□□ 0.02
SS18-212ENST00000579061 KDM4CQ9H3R0 1056 aa15.18■□□□□ 0.02
SS18-212ENST00000579061 TSPY26PQ9H489 355 aa15.18■□□□□ 0.02
SS18-212ENST00000579061 MRPL47Q9HD33 250 aaKnown RBP15.18■□□□□ 0.02
SS18-212ENST00000579061 CNOT8Q9UFF9 292 aaKnown RBP15.18■□□□□ 0.02
SS18-212ENST00000579061 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.18■□□□□ 0.022e-6■■□□□ 14.5
SS18-212ENST00000579061 MED19A0JLT2 244 aaPredicted RBP15.17■□□□□ 0.02
SS18-212ENST00000579061 WASH4PA8MWX3 477 aa15.17■□□□□ 0.02
SS18-212ENST00000579061 CBX4O00257 560 aa15.17■□□□□ 0.02
SS18-212ENST00000579061 SLC7A4O43246 635 aa15.17■□□□□ 0.02
SS18-212ENST00000579061 CBFA2T2O43439 604 aa15.17■□□□□ 0.02
SS18-212ENST00000579061 GYPCP04921 128 aa15.17■□□□□ 0.02
SS18-212ENST00000579061 CSRP1P21291 193 aaKnown RBP15.17■□□□□ 0.02
SS18-212ENST00000579061 PSMA2P25787 234 aa15.17■□□□□ 0.02
SS18-212ENST00000579061 CD27P26842 260 aa15.17■□□□□ 0.02
SS18-212ENST00000579061 DRD3P35462 400 aa15.17■□□□□ 0.02
SS18-212ENST00000579061 MAPK8P45983 427 aa15.17■□□□□ 0.02
SS18-212ENST00000579061 SERPINH1P50454 418 aaKnown RBP15.17■□□□□ 0.02
SS18-212ENST00000579061 CCR5P51681 352 aa15.17■□□□□ 0.02
SS18-212ENST00000579061 GEMIN4P57678 1058 aaKnown RBP15.17■□□□□ 0.02
SS18-212ENST00000579061 SEMA3BQ13214 749 aa15.17■□□□□ 0.02
SS18-212ENST00000579061 C22orf39Q6P5X5 142 aa15.17■□□□□ 0.02
SS18-212ENST00000579061 PCDH20Q8N6Y1 951 aaKnown RBP15.17■□□□□ 0.02
SS18-212ENST00000579061 RTL3Q8N8U3 475 aaKnown RBP15.17■□□□□ 0.02
SS18-212ENST00000579061 TMIEQ8NEW7 156 aa15.17■□□□□ 0.02
SS18-212ENST00000579061 OR2A12Q8NGT7 310 aa15.17■□□□□ 0.02
SS18-212ENST00000579061 PIP4K2CQ8TBX8 421 aa15.17■□□□□ 0.02
SS18-212ENST00000579061 SNX19Q92543 992 aa15.17■□□□□ 0.02
SS18-212ENST00000579061 ARHGEF2Q92974 986 aaKnown RBP15.17■□□□□ 0.02
SS18-212ENST00000579061 ZNF653Q96CK0 615 aa15.17■□□□□ 0.02
SS18-212ENST00000579061 SPON2Q9BUD6 331 aa15.17■□□□□ 0.02
SS18-212ENST00000579061 XPO4Q9C0E2 1151 aaKnown RBP15.17■□□□□ 0.02
SS18-212ENST00000579061 CATSPERBQ9H7T0 1116 aa15.17■□□□□ 0.02
SS18-212ENST00000579061 NDFIP2Q9NV92 336 aa15.17■□□□□ 0.02
SS18-212ENST00000579061 DNAAF2Q9NVR5 837 aaKnown RBP15.17■□□□□ 0.02
SS18-212ENST00000579061 DONSONQ9NYP3 566 aa15.17■□□□□ 0.02
SS18-212ENST00000579061 SARDHQ9UL12 918 aa15.17■□□□□ 0.02
SS18-212ENST00000579061 CABIN1Q9Y6J0 2220 aa15.16■□□□□ 0.02
SS18-212ENST00000579061 K7ERQ8 282 aa15.16■□□□□ 0.02
SS18-212ENST00000579061 ATMINO43313 823 aaPredicted RBP15.16■□□□□ 0.02
SS18-212ENST00000579061 SMAD6O43541 496 aaKnown RBP15.16■□□□□ 0.02
SS18-212ENST00000579061 OPHN1O60890 802 aa15.16■□□□□ 0.02
SS18-212ENST00000579061 RAMP2O60895 175 aa15.16■□□□□ 0.02
SS18-212ENST00000579061 RNF8O76064 485 aa15.16■□□□□ 0.02
SS18-212ENST00000579061 FSBPO95073 299 aa15.16■□□□□ 0.02
SS18-212ENST00000579061 KCNK5O95279 499 aa15.16■□□□□ 0.02
SS18-212ENST00000579061 PRNPP04156 253 aa15.16■□□□□ 0.02
SS18-212ENST00000579061 IGHV4-34P06331 123 aa15.16■□□□□ 0.02
SS18-212ENST00000579061 GLDCP23378 1020 aa15.16■□□□□ 0.02
SS18-212ENST00000579061 EPHB2P29323 1055 aa15.16■□□□□ 0.02
SS18-212ENST00000579061 HNRNPH3P31942 346 aaKnown RBP15.16■□□□□ 0.02
SS18-212ENST00000579061 CHRNA3P32297 505 aa15.16■□□□□ 0.02
SS18-212ENST00000579061 GRIA4P48058 902 aa15.16■□□□□ 0.02
SS18-212ENST00000579061 ADPRHP54922 357 aa15.16■□□□□ 0.02
SS18-212ENST00000579061 YBEYP58557 167 aaPredicted RBP15.16■□□□□ 0.02
SS18-212ENST00000579061 ARF5P84085 180 aa15.16■□□□□ 0.02
SS18-212ENST00000579061 CCDC15Q0P6D6 951 aa15.16■□□□□ 0.02
SS18-212ENST00000579061 GRIK2Q13002 908 aa15.16■□□□□ 0.02
SS18-212ENST00000579061 TRIM14Q14142 442 aa15.16■□□□□ 0.02
SS18-212ENST00000579061 ACAP1Q15027 740 aa15.16■□□□□ 0.02
SS18-212ENST00000579061 UAP1L1Q3KQV9 507 aa15.16■□□□□ 0.02
SS18-212ENST00000579061 NCEH1Q6PIU2 408 aa15.16■□□□□ 0.02
SS18-212ENST00000579061 IL27RAQ6UWB1 636 aa15.16■□□□□ 0.02
SS18-212ENST00000579061 LINGO4Q6UY18 593 aa15.16■□□□□ 0.02
SS18-212ENST00000579061 PLPP6Q8IY26 295 aa15.16■□□□□ 0.02
SS18-212ENST00000579061 PYROXD2Q8N2H3 581 aa15.16■□□□□ 0.02
SS18-212ENST00000579061 MINDY1Q8N5J2 469 aa15.16■□□□□ 0.02
SS18-212ENST00000579061 CPLX3Q8WVH0 158 aa15.16■□□□□ 0.02
SS18-212ENST00000579061 ISG20Q96AZ6 181 aaKnown RBP15.16■□□□□ 0.02
SS18-212ENST00000579061 ORAI3Q9BRQ5 295 aa15.16■□□□□ 0.02
SS18-212ENST00000579061 GTPBP2Q9BX10 602 aaKnown RBP15.16■□□□□ 0.02
SS18-212ENST00000579061 FSCN3Q9NQT6 498 aa15.16■□□□□ 0.02
SS18-212ENST00000579061 DNAI1Q9UI46 699 aa15.16■□□□□ 0.02
SS18-212ENST00000579061 HPCAL4Q9UM19 191 aa15.16■□□□□ 0.02
SS18-212ENST00000579061 NCOR2Q9Y618 2525 aa15.16■□□□□ 0.02
SS18-212ENST00000579061 PLXNA2O75051 1894 aa15.16■□□□□ 0.02
SS18-212ENST00000579061 A0A1W2PPC4 97 aa15.15■□□□□ 0.02
SS18-212ENST00000579061 ZSCAN5CA6NGD5 496 aaPredicted RBP15.15■□□□□ 0.02
SS18-212ENST00000579061 FGF10O15520 208 aaPredicted RBP15.15■□□□□ 0.02
SS18-212ENST00000579061 PLRG1O43660 514 aaKnown RBP15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms