RNA–Protein interactions for RNA: ENST00000578985.5

IFT20-208, Transcript of intraflagellar transport 20, humanhuman

TSL 3 BASIC

Gene IFT20, Length 831 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-208ENST00000578985 NPWQ8N729 165 aa15.72■□□□□ 0.11
IFT20-208ENST00000578985 OR2T3Q8NH03 318 aa15.72■□□□□ 0.11
IFT20-208ENST00000578985 FAF2Q96CS3 445 aa15.72■□□□□ 0.11
IFT20-208ENST00000578985 MRGPRX1Q96LB2 322 aa15.72■□□□□ 0.11
IFT20-208ENST00000578985 TPSD1Q9BZJ3 242 aa15.72■□□□□ 0.11
IFT20-208ENST00000578985 SLC6A17Q9H1V8 727 aa15.72■□□□□ 0.11
IFT20-208ENST00000578985 FBRSQ9HAH7 460 aa15.72■□□□□ 0.11
IFT20-208ENST00000578985 FAM86C1Q9NVL1 165 aa15.72■□□□□ 0.11
IFT20-208ENST00000578985 R4GN57 208 aa15.72■□□□□ 0.11
IFT20-208ENST00000578985 SHROOM3Q8TF72 1996 aa15.72■□□□□ 0.11
IFT20-208ENST00000578985 CXorf51AA0A1B0GTR3 108 aa15.71■□□□□ 0.11
IFT20-208ENST00000578985 ZSCAN5CA6NGD5 496 aaPredicted RBP15.71■□□□□ 0.11
IFT20-208ENST00000578985 DFFAO00273 331 aa15.71■□□□□ 0.11
IFT20-208ENST00000578985 SMAD6O43541 496 aaKnown RBP15.71■□□□□ 0.11
IFT20-208ENST00000578985 KRT86O43790 486 aa15.71■□□□□ 0.11
IFT20-208ENST00000578985 VAV1P15498 845 aa15.71■□□□□ 0.11
IFT20-208ENST00000578985 SERPINH1P50454 418 aaKnown RBP15.71■□□□□ 0.11
IFT20-208ENST00000578985 PAPOLAP51003 745 aaKnown RBP15.71■□□□□ 0.11
IFT20-208ENST00000578985 COPAP53621 1224 aa15.71■□□□□ 0.11
IFT20-208ENST00000578985 GEMIN4P57678 1058 aaKnown RBP15.71■□□□□ 0.11
IFT20-208ENST00000578985 KIAA1324Q6UXG2 1013 aaKnown RBP15.71■□□□□ 0.11
IFT20-208ENST00000578985 TMPRSS6Q8IU80 811 aa15.71■□□□□ 0.11
IFT20-208ENST00000578985 RNF10Q8N5U6 811 aaKnown RBP15.71■□□□□ 0.11
IFT20-208ENST00000578985 LRRC57Q8N9N7 239 aa15.71■□□□□ 0.11
IFT20-208ENST00000578985 NETO2Q8NC67 525 aa15.71■□□□□ 0.11
IFT20-208ENST00000578985 PCDH19Q8TAB3 1148 aa15.71■□□□□ 0.11
IFT20-208ENST00000578985 PTPRN2Q92932 1015 aa15.71■□□□□ 0.11
IFT20-208ENST00000578985 RNF25Q96BH1 459 aaPredicted RBP15.71■□□□□ 0.11
IFT20-208ENST00000578985 PRDM16Q9HAZ2 1276 aa15.71■□□□□ 0.11
IFT20-208ENST00000578985 GUCA1BQ9UMX6 200 aa15.71■□□□□ 0.11
IFT20-208ENST00000578985 SBDSQ9Y3A5 250 aaKnown RBP eCLIP15.71■□□□□ 0.11
IFT20-208ENST00000578985 PLXND1Q9Y4D7 1925 aa15.7■□□□□ 0.1
IFT20-208ENST00000578985 SPAG17Q6Q759 2223 aa15.7■□□□□ 0.1
IFT20-208ENST00000578985 C3orf70A6NLC5 250 aaPredicted RBP15.7■□□□□ 0.1
IFT20-208ENST00000578985 ZNF487B1APH4 448 aa15.7■□□□□ 0.1
IFT20-208ENST00000578985 LILRB5O75023 590 aa15.7■□□□□ 0.1
IFT20-208ENST00000578985 PALMO75781 387 aa15.7■□□□□ 0.1
IFT20-208ENST00000578985 SERPINB6P35237 376 aa15.7■□□□□ 0.1
IFT20-208ENST00000578985 USP39Q53GS9 565 aaKnown RBP15.7■□□□□ 0.1
IFT20-208ENST00000578985 LEKR1Q6ZMV7 388 aa15.7■□□□□ 0.1
IFT20-208ENST00000578985 ZNF662Q6ZS27 426 aa15.7■□□□□ 0.1
IFT20-208ENST00000578985 Q6ZVU0 165 aa15.7■□□□□ 0.1
IFT20-208ENST00000578985 VSIG1Q86XK7 387 aa15.7■□□□□ 0.1
IFT20-208ENST00000578985 STK40Q8N2I9 435 aa15.7■□□□□ 0.1
IFT20-208ENST00000578985 PRCCQ92733 491 aaPredicted RBP15.7■□□□□ 0.1
IFT20-208ENST00000578985 SIPA1Q96FS4 1042 aa15.7■□□□□ 0.1
IFT20-208ENST00000578985 RNF157Q96PX1 679 aa15.7■□□□□ 0.1
IFT20-208ENST00000578985 FAM129BQ96TA1 746 aa15.7■□□□□ 0.1
IFT20-208ENST00000578985 CEP44Q9C0F1 390 aa15.7■□□□□ 0.1
IFT20-208ENST00000578985 MKRN2Q9H000 416 aaKnown RBP15.7■□□□□ 0.1
IFT20-208ENST00000578985 RSPH9Q9H1X1 276 aaPredicted RBP15.7■□□□□ 0.1
IFT20-208ENST00000578985 ACTL7AQ9Y615 435 aa15.7■□□□□ 0.1
IFT20-208ENST00000578985 HRO43593 1189 aa15.69■□□□□ 0.1
IFT20-208ENST00000578985 PRAMEF11O60813 436 aa15.69■□□□□ 0.1
IFT20-208ENST00000578985 RNASEH1O60930 286 aaKnown RBP15.69■□□□□ 0.1
IFT20-208ENST00000578985 CD160O95971 181 aa15.69■□□□□ 0.1
IFT20-208ENST00000578985 CNR2P34972 360 aa15.69■□□□□ 0.1
IFT20-208ENST00000578985 MARCKSL1P49006 195 aa15.69■□□□□ 0.1
IFT20-208ENST00000578985 RPS14P62263 151 aaKnown RBP15.69■□□□□ 0.1
IFT20-208ENST00000578985 SRSF5Q13243 272 aaKnown RBP15.69■□□□□ 0.1
IFT20-208ENST00000578985 BYSLQ13895 437 aaKnown RBP15.69■□□□□ 0.1
IFT20-208ENST00000578985 ELAVL3Q14576 367 aaKnown RBP15.69■□□□□ 0.1
IFT20-208ENST00000578985 PAFAH1B3Q15102 231 aaKnown RBP15.69■□□□□ 0.1
IFT20-208ENST00000578985 ZNF776Q68DI1 518 aaPredicted RBP15.69■□□□□ 0.1
IFT20-208ENST00000578985 C22orf39Q6P5X5 142 aa15.69■□□□□ 0.1
IFT20-208ENST00000578985 MFSD7Q6UXD7 560 aa15.69■□□□□ 0.1
IFT20-208ENST00000578985 PEX26Q7Z412 305 aa15.69■□□□□ 0.1
IFT20-208ENST00000578985 TP53INP2Q8IXH6 220 aa15.69■□□□□ 0.1
IFT20-208ENST00000578985 KATNAL2Q8IYT4 538 aa15.69■□□□□ 0.1
IFT20-208ENST00000578985 RCOR2Q8IZ40 523 aa15.69■□□□□ 0.1
IFT20-208ENST00000578985 SYCE1Q8N0S2 351 aa15.69■□□□□ 0.1
IFT20-208ENST00000578985 PQLC3Q8N755 202 aa15.69■□□□□ 0.1
IFT20-208ENST00000578985 GAB3Q8WWW8 586 aa15.69■□□□□ 0.1
IFT20-208ENST00000578985 CASKIN2Q8WXE0 1202 aa15.69■□□□□ 0.1
IFT20-208ENST00000578985 KRT35Q92764 455 aa15.69■□□□□ 0.1
IFT20-208ENST00000578985 ZNF830Q96NB3 372 aaPredicted RBP15.69■□□□□ 0.1
IFT20-208ENST00000578985 MAK16Q9BXY0 300 aaKnown RBP15.69■□□□□ 0.1
IFT20-208ENST00000578985 KCNF1Q9H3M0 494 aa15.69■□□□□ 0.1
IFT20-208ENST00000578985 AMFRQ9UKV5 643 aa15.69■□□□□ 0.1
IFT20-208ENST00000578985 INVSQ9Y283 1065 aa15.69■□□□□ 0.1
IFT20-208ENST00000578985 PPP2R2CQ9Y2T4 447 aa15.69■□□□□ 0.1
IFT20-208ENST00000578985 FCF1Q9Y324 198 aaKnown RBP15.69■□□□□ 0.1
IFT20-208ENST00000578985 PCDHA3Q9Y5H8 950 aa15.69■□□□□ 0.1
IFT20-208ENST00000578985 ABCA7Q8IZY2 2146 aa15.68■□□□□ 0.1
IFT20-208ENST00000578985 THADAQ6YHU6 1953 aa15.68■□□□□ 0.1
IFT20-208ENST00000578985 J3KR12 359 aa15.68■□□□□ 0.1
IFT20-208ENST00000578985 MFSD11O43934 449 aa15.68■□□□□ 0.1
IFT20-208ENST00000578985 BNIP3LO60238 219 aa15.68■□□□□ 0.1
IFT20-208ENST00000578985 RPP40O75818 363 aaKnown RBP15.68■□□□□ 0.1
IFT20-208ENST00000578985 ZRANB2O95218 330 aaKnown RBP eCLIP15.68■□□□□ 0.1
IFT20-208ENST00000578985 CTNNA2P26232 953 aa15.68■□□□□ 0.1
IFT20-208ENST00000578985 CTNNA1P35221 906 aaKnown RBP15.68■□□□□ 0.1
IFT20-208ENST00000578985 NBL1P41271 181 aa15.68■□□□□ 0.1
IFT20-208ENST00000578985 RECQLP46063 649 aaPredicted RBP15.68■□□□□ 0.1
IFT20-208ENST00000578985 DNA2P51530 1060 aa15.68■□□□□ 0.1
IFT20-208ENST00000578985 NHLH1Q02575 133 aa15.68■□□□□ 0.1
IFT20-208ENST00000578985 IL10RBQ08334 325 aa15.68■□□□□ 0.1
IFT20-208ENST00000578985 MAP7D1Q3KQU3 841 aa15.68■□□□□ 0.1
IFT20-208ENST00000578985 NCBP2-AS2Q69YL0 99 aa15.68■□□□□ 0.1
IFT20-208ENST00000578985 SPOCD1Q6ZMY3 1216 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms