RNA–Protein interactions for RNA: ENST00000578692.1

CRLF3-203, Transcript of cytokine receptor like factor 3, humanhuman

TSL 2

Gene CRLF3, Length 1,392 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-203ENST00000578692 A0A1B0GTQ1 180 aa16.26■□□□□ 0.19
CRLF3-203ENST00000578692 ILVBLA1L0T0 632 aa16.26■□□□□ 0.19
CRLF3-203ENST00000578692 SMAD6O43541 496 aaKnown RBP16.26■□□□□ 0.19
CRLF3-203ENST00000578692 UNGP13051 313 aaPredicted RBP16.26■□□□□ 0.19
CRLF3-203ENST00000578692 RRM1P23921 792 aa16.26■□□□□ 0.19
CRLF3-203ENST00000578692 SDC4P31431 198 aa16.26■□□□□ 0.19
CRLF3-203ENST00000578692 CHRNA3P32297 505 aa16.26■□□□□ 0.19
CRLF3-203ENST00000578692 GRK6P43250 576 aa16.26■□□□□ 0.19
CRLF3-203ENST00000578692 PPP2CBP62714 309 aa16.26■□□□□ 0.19
CRLF3-203ENST00000578692 PPP2CAP67775 309 aa16.26■□□□□ 0.19
CRLF3-203ENST00000578692 IL9RQ01113 521 aa16.26■□□□□ 0.19
CRLF3-203ENST00000578692 UBXN1Q04323 297 aa16.26■□□□□ 0.19
CRLF3-203ENST00000578692 STX1AQ16623 288 aa16.26■□□□□ 0.19
CRLF3-203ENST00000578692 CDO1Q16878 200 aa16.26■□□□□ 0.19
CRLF3-203ENST00000578692 C15orf59Q2T9L4 293 aaPredicted RBP16.26■□□□□ 0.19
CRLF3-203ENST00000578692 ARL13BQ3SXY8 428 aa16.26■□□□□ 0.19
CRLF3-203ENST00000578692 CCDC14Q49A88 953 aa16.26■□□□□ 0.19
CRLF3-203ENST00000578692 RAB6CQ53S08 254 aa16.26■□□□□ 0.19
CRLF3-203ENST00000578692 AGBL4Q5VU57 503 aa16.26■□□□□ 0.19
CRLF3-203ENST00000578692 LINGO4Q6UY18 593 aa16.26■□□□□ 0.19
CRLF3-203ENST00000578692 ZNF783Q6ZMS7 281 aa16.26■□□□□ 0.19
CRLF3-203ENST00000578692 OR7D4Q8NG98 312 aa16.26■□□□□ 0.19
CRLF3-203ENST00000578692 OR2A12Q8NGT7 310 aa16.26■□□□□ 0.19
CRLF3-203ENST00000578692 PCDHB18PQ96TA0 734 aa16.26■□□□□ 0.19
CRLF3-203ENST00000578692 ELF4Q99607 663 aaPredicted RBP16.26■□□□□ 0.19
CRLF3-203ENST00000578692 SPON2Q9BUD6 331 aa16.26■□□□□ 0.19
CRLF3-203ENST00000578692 RAB6CQ9H0N0 254 aa16.26■□□□□ 0.19
CRLF3-203ENST00000578692 PPARGC1AQ9UBK2 798 aaKnown RBP16.26■□□□□ 0.19
CRLF3-203ENST00000578692 ZNF212Q9UDV6 495 aa16.26■□□□□ 0.19
CRLF3-203ENST00000578692 OR12D3Q9UGF7 316 aa16.26■□□□□ 0.19
CRLF3-203ENST00000578692 DOCK4Q8N1I0 1966 aa16.25■□□□□ 0.19
CRLF3-203ENST00000578692 CACNA1BQ00975 2339 aa16.25■□□□□ 0.19
CRLF3-203ENST00000578692 LGALS16A8MUM7 142 aa16.25■□□□□ 0.19
CRLF3-203ENST00000578692 TLR4O00206 839 aa16.25■□□□□ 0.19
CRLF3-203ENST00000578692 CBX4O00257 560 aa16.25■□□□□ 0.19
CRLF3-203ENST00000578692 CTSLP07711 333 aa16.25■□□□□ 0.19
CRLF3-203ENST00000578692 ATXN1LP0C7T5 689 aaKnown RBP16.25■□□□□ 0.19
CRLF3-203ENST00000578692 GLDCP23378 1020 aa16.25■□□□□ 0.19
CRLF3-203ENST00000578692 MAT2AP31153 395 aaKnown RBP16.25■□□□□ 0.19
CRLF3-203ENST00000578692 ADRA1BP35368 520 aa16.25■□□□□ 0.19
CRLF3-203ENST00000578692 NUDT1P36639 197 aa16.25■□□□□ 0.19
CRLF3-203ENST00000578692 CLCN6P51797 869 aa16.25■□□□□ 0.19
CRLF3-203ENST00000578692 SLC20A2Q08357 652 aa16.25■□□□□ 0.19
CRLF3-203ENST00000578692 CCDC15Q0P6D6 951 aa16.25■□□□□ 0.19
CRLF3-203ENST00000578692 NAPEPLDQ6IQ20 393 aa16.25■□□□□ 0.19
CRLF3-203ENST00000578692 RETSATQ6NUM9 610 aa16.25■□□□□ 0.19
CRLF3-203ENST00000578692 MFSD2AQ8NA29 543 aa16.25■□□□□ 0.19
CRLF3-203ENST00000578692 TMIEQ8NEW7 156 aa16.25■□□□□ 0.19
CRLF3-203ENST00000578692 JOSD2Q8TAC2 188 aa16.25■□□□□ 0.19
CRLF3-203ENST00000578692 GDF3Q9NR23 364 aa16.25■□□□□ 0.19
CRLF3-203ENST00000578692 TOR4AQ9NXH8 423 aa16.25■□□□□ 0.19
CRLF3-203ENST00000578692 ADAM22Q9P0K1 906 aa16.25■□□□□ 0.19
CRLF3-203ENST00000578692 EPG5Q9HCE0 2579 aa16.24■□□□□ 0.19
CRLF3-203ENST00000578692 C2CD4BA6NLJ0 364 aa16.24■□□□□ 0.19
CRLF3-203ENST00000578692 GOLGA8CPA6NN73 597 aa16.24■□□□□ 0.19
CRLF3-203ENST00000578692 KPNA3O00505 521 aaPredicted RBP16.24■□□□□ 0.19
CRLF3-203ENST00000578692 TNFSF14O43557 240 aa16.24■□□□□ 0.19
CRLF3-203ENST00000578692 GJB6O95452 261 aa16.24■□□□□ 0.19
CRLF3-203ENST00000578692 KRT3P12035 628 aa16.24■□□□□ 0.19
CRLF3-203ENST00000578692 PTPN9P43378 593 aa16.24■□□□□ 0.19
CRLF3-203ENST00000578692 RECQLP46063 649 aaPredicted RBP16.24■□□□□ 0.19
CRLF3-203ENST00000578692 NSFP46459 744 aaKnown RBP16.24■□□□□ 0.19
CRLF3-203ENST00000578692 GNA12Q03113 381 aa16.24■□□□□ 0.19
CRLF3-203ENST00000578692 PTP4A2Q12974 167 aa16.24■□□□□ 0.19
CRLF3-203ENST00000578692 STRADAQ7RTN6 431 aa16.24■□□□□ 0.19
CRLF3-203ENST00000578692 TRIM69Q86WT6 500 aa16.24■□□□□ 0.19
CRLF3-203ENST00000578692 KNL1Q8NG31 2342 aa16.24■□□□□ 0.19
CRLF3-203ENST00000578692 ERGIC2Q96RQ1 377 aa16.24■□□□□ 0.19
CRLF3-203ENST00000578692 OSBPL2Q9H1P3 480 aa16.24■□□□□ 0.19
CRLF3-203ENST00000578692 ATP13A1Q9HD20 1204 aa16.24■□□□□ 0.19
CRLF3-203ENST00000578692 DMTF1Q9Y222 760 aa16.24■□□□□ 0.19
CRLF3-203ENST00000578692 TP53BP1Q12888 1972 aaPredicted RBP16.23■□□□□ 0.19
CRLF3-203ENST00000578692 ZMPSTE24O75844 475 aa16.23■□□□□ 0.19
CRLF3-203ENST00000578692 DKK1O94907 266 aa16.23■□□□□ 0.19
CRLF3-203ENST00000578692 MBD3O95983 291 aa16.23■□□□□ 0.19
CRLF3-203ENST00000578692 PRNPP04156 253 aa16.23■□□□□ 0.19
CRLF3-203ENST00000578692 ITGAVP06756 1048 aa16.23■□□□□ 0.19
CRLF3-203ENST00000578692 RFC1P35251 1148 aaPredicted RBP16.23■□□□□ 0.19
CRLF3-203ENST00000578692 TAS2R38P59533 333 aa16.23■□□□□ 0.19
CRLF3-203ENST00000578692 NRG1Q02297 640 aaPredicted RBP16.23■□□□□ 0.19
CRLF3-203ENST00000578692 STAT4Q14765 748 aa16.23■□□□□ 0.19
CRLF3-203ENST00000578692 NCAPHQ15003 741 aa16.23■□□□□ 0.19
CRLF3-203ENST00000578692 SHBQ15464 509 aa16.23■□□□□ 0.19
CRLF3-203ENST00000578692 CLEC16AQ2KHT3 1053 aa16.23■□□□□ 0.19
CRLF3-203ENST00000578692 INAVAQ3KP66 663 aa16.23■□□□□ 0.19
CRLF3-203ENST00000578692 ARSIQ5FYB1 569 aa16.23■□□□□ 0.19
CRLF3-203ENST00000578692 CCDC183Q5T5S1 534 aa16.23■□□□□ 0.19
CRLF3-203ENST00000578692 PIP5KL1Q5T9C9 394 aa16.23■□□□□ 0.19
CRLF3-203ENST00000578692 C22orf39Q6P5X5 142 aa16.23■□□□□ 0.19
CRLF3-203ENST00000578692 PHF13Q86YI8 300 aaPredicted RBP16.23■□□□□ 0.19
CRLF3-203ENST00000578692 GATAD2AQ86YP4 633 aa16.23■□□□□ 0.19
CRLF3-203ENST00000578692 DRC7Q8IY82 874 aa16.23■□□□□ 0.19
CRLF3-203ENST00000578692 CHST14Q8NCH0 376 aa16.23■□□□□ 0.19
CRLF3-203ENST00000578692 ZCCHC14Q8WYQ9 949 aaKnown RBP16.23■□□□□ 0.19
CRLF3-203ENST00000578692 CENPIQ92674 756 aaPredicted RBP16.23■□□□□ 0.19
CRLF3-203ENST00000578692 ARRDC3Q96B67 414 aa16.23■□□□□ 0.19
CRLF3-203ENST00000578692 SELENOOQ9BVL4 669 aa16.23■□□□□ 0.19
CRLF3-203ENST00000578692 TNKS2Q9H2K2 1166 aa16.23■□□□□ 0.19
CRLF3-203ENST00000578692 RETREG1Q9H6L5 497 aa16.23■□□□□ 0.19
CRLF3-203ENST00000578692 PREBQ9HCU5 417 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms