RNA–Protein interactions for RNA: ENST00000577988.2

SNORD3B-1-201, Transcript of small nucleolar RNA, C/D box 3B-1, humanhuman

BASIC

Gene SNORD3B-1, Length 758 nt, Biotype snoRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD3B-1-201ENST00000577988 ARF5P84085 180 aa14.19□□□□□ -0.14
SNORD3B-1-201ENST00000577988 MAP7D1Q3KQU3 841 aa14.19□□□□□ -0.14
SNORD3B-1-201ENST00000577988 AFMIDQ63HM1 303 aa14.19□□□□□ -0.14
SNORD3B-1-201ENST00000577988 C11orf63Q6NUN7 778 aa14.19□□□□□ -0.14
SNORD3B-1-201ENST00000577988 TMCO3Q6UWJ1 677 aa14.19□□□□□ -0.14
SNORD3B-1-201ENST00000577988 KIAA1324Q6UXG2 1013 aaKnown RBP14.19□□□□□ -0.14
SNORD3B-1-201ENST00000577988 RHOT1Q8IXI2 618 aa14.19□□□□□ -0.14
SNORD3B-1-201ENST00000577988 PCDH20Q8N6Y1 951 aaKnown RBP14.19□□□□□ -0.14
SNORD3B-1-201ENST00000577988 ZNF366Q8N895 744 aa14.19□□□□□ -0.14
SNORD3B-1-201ENST00000577988 SUMF1Q8NBK3 374 aa14.19□□□□□ -0.14
SNORD3B-1-201ENST00000577988 OR8D1Q8WZ84 308 aa14.19□□□□□ -0.14
SNORD3B-1-201ENST00000577988 TPSD1Q9BZJ3 242 aa14.19□□□□□ -0.14
SNORD3B-1-201ENST00000577988 KLC2Q9H0B6 622 aa14.19□□□□□ -0.14
SNORD3B-1-201ENST00000577988 USP36Q9P275 1121 aaKnown RBP14.19□□□□□ -0.14
SNORD3B-1-201ENST00000577988 ALG6Q9Y672 507 aa14.19□□□□□ -0.14
SNORD3B-1-201ENST00000577988 GON4LQ3T8J9 2241 aa14.19□□□□□ -0.14
SNORD3B-1-201ENST00000577988 RCCD1A6NED2 376 aa14.18□□□□□ -0.14
SNORD3B-1-201ENST00000577988 MCF2LO15068 1137 aa14.18□□□□□ -0.14
SNORD3B-1-201ENST00000577988 PSTPIP1O43586 416 aa14.18□□□□□ -0.14
SNORD3B-1-201ENST00000577988 SPOPO43791 374 aa14.18□□□□□ -0.14
SNORD3B-1-201ENST00000577988 MT-CO1P00395 513 aa14.18□□□□□ -0.14
SNORD3B-1-201ENST00000577988 DNTTP04053 509 aa14.18□□□□□ -0.14
SNORD3B-1-201ENST00000577988 COMTP21964 271 aa14.18□□□□□ -0.14
SNORD3B-1-201ENST00000577988 AMPD1P23109 780 aa14.18□□□□□ -0.14
SNORD3B-1-201ENST00000577988 KDELR1P24390 212 aa14.18□□□□□ -0.14
SNORD3B-1-201ENST00000577988 IL4RP24394 825 aa14.18□□□□□ -0.14
SNORD3B-1-201ENST00000577988 PLA2G5P39877 138 aa14.18□□□□□ -0.14
SNORD3B-1-201ENST00000577988 RECQLP46063 649 aaPredicted RBP14.18□□□□□ -0.14
SNORD3B-1-201ENST00000577988 RPS14P62263 151 aaKnown RBP14.18□□□□□ -0.14
SNORD3B-1-201ENST00000577988 ELF2Q15723 593 aa14.18□□□□□ -0.14
SNORD3B-1-201ENST00000577988 TTC31Q49AM3 519 aaPredicted RBP14.18□□□□□ -0.14
SNORD3B-1-201ENST00000577988 ODF2Q5BJF6 829 aa14.18□□□□□ -0.14
SNORD3B-1-201ENST00000577988 ZFYVE27Q5T4F4 411 aa14.18□□□□□ -0.14
SNORD3B-1-201ENST00000577988 TMCO4Q5TGY1 634 aa14.18□□□□□ -0.14
SNORD3B-1-201ENST00000577988 FAM46CQ5VWP2 391 aa14.18□□□□□ -0.14
SNORD3B-1-201ENST00000577988 USP30Q70CQ3 517 aa14.18□□□□□ -0.14
SNORD3B-1-201ENST00000577988 KBTBD6Q86V97 674 aa14.18□□□□□ -0.14
SNORD3B-1-201ENST00000577988 ACRBPQ8NEB7 543 aa14.18□□□□□ -0.14
SNORD3B-1-201ENST00000577988 TPCN2Q8NHX9 752 aa14.18□□□□□ -0.14
SNORD3B-1-201ENST00000577988 FAF2Q96CS3 445 aa14.18□□□□□ -0.14
SNORD3B-1-201ENST00000577988 HMCESQ96FZ2 354 aa14.18□□□□□ -0.14
SNORD3B-1-201ENST00000577988 FAM129BQ96TA1 746 aa14.18□□□□□ -0.14
SNORD3B-1-201ENST00000577988 SBDSQ9Y3A5 250 aaKnown RBP eCLIP14.18□□□□□ -0.14
SNORD3B-1-201ENST00000577988 RALGAPA1Q6GYQ0 2036 aa14.17□□□□□ -0.14
SNORD3B-1-201ENST00000577988 PTPRZ1P23471 2315 aaPredicted RBP14.17□□□□□ -0.14
SNORD3B-1-201ENST00000577988 MAP3K13O43283 966 aa14.17□□□□□ -0.14
SNORD3B-1-201ENST00000577988 BUB1O43683 1085 aa14.17□□□□□ -0.14
SNORD3B-1-201ENST00000577988 CD160O95971 181 aa14.17□□□□□ -0.14
SNORD3B-1-201ENST00000577988 ADH1BP00325 375 aa14.17□□□□□ -0.14
SNORD3B-1-201ENST00000577988 C5AR1P21730 350 aa14.17□□□□□ -0.14
SNORD3B-1-201ENST00000577988 GLDCP23378 1020 aa14.17□□□□□ -0.14
SNORD3B-1-201ENST00000577988 NAP1L1P55209 391 aaKnown RBP14.17□□□□□ -0.14
SNORD3B-1-201ENST00000577988 CCDC15Q0P6D6 951 aa14.17□□□□□ -0.14
SNORD3B-1-201ENST00000577988 DPYSL3Q14195 570 aa14.17□□□□□ -0.14
SNORD3B-1-201ENST00000577988 RFTN1Q14699 578 aaPredicted RBP14.17□□□□□ -0.14
SNORD3B-1-201ENST00000577988 PLK5Q496M5 336 aa14.17□□□□□ -0.14
SNORD3B-1-201ENST00000577988 ATP13A4Q4VNC1 1196 aa14.17□□□□□ -0.14
SNORD3B-1-201ENST00000577988 LAIR1Q6GTX8 287 aa14.17□□□□□ -0.14
SNORD3B-1-201ENST00000577988 C22orf39Q6P5X5 142 aa14.17□□□□□ -0.14
SNORD3B-1-201ENST00000577988 LINGO4Q6UY18 593 aa14.17□□□□□ -0.14
SNORD3B-1-201ENST00000577988 DAAM2Q86T65 1068 aa14.17□□□□□ -0.14
SNORD3B-1-201ENST00000577988 ZNF354CQ86Y25 554 aa14.17□□□□□ -0.14
SNORD3B-1-201ENST00000577988 STK40Q8N2I9 435 aa14.17□□□□□ -0.14
SNORD3B-1-201ENST00000577988 RNF10Q8N5U6 811 aaKnown RBP14.17□□□□□ -0.14
SNORD3B-1-201ENST00000577988 KIAA1524Q8TCG1 905 aa14.17□□□□□ -0.14
SNORD3B-1-201ENST00000577988 LRIG1Q96JA1 1093 aa14.17□□□□□ -0.14
SNORD3B-1-201ENST00000577988 CALN1Q9BXU9 219 aa14.17□□□□□ -0.14
SNORD3B-1-201ENST00000577988 TSGA10Q9BZW7 698 aa14.17□□□□□ -0.14
SNORD3B-1-201ENST00000577988 SLC39A8Q9C0K1 460 aa14.17□□□□□ -0.14
SNORD3B-1-201ENST00000577988 LACRTQ9GZZ8 138 aa14.17□□□□□ -0.14
SNORD3B-1-201ENST00000577988 PCED1AQ9H1Q7 454 aa14.17□□□□□ -0.14
SNORD3B-1-201ENST00000577988 SMG5Q9UPR3 1016 aaKnown RBP14.17□□□□□ -0.14
SNORD3B-1-201ENST00000577988 NCKAP1Q9Y2A7 1128 aa14.17□□□□□ -0.14
SNORD3B-1-201ENST00000577988 ADGRG1Q9Y653 693 aa14.17□□□□□ -0.14
SNORD3B-1-201ENST00000577988 CEP192Q8TEP8 1941 aa14.17□□□□□ -0.14
SNORD3B-1-201ENST00000577988 FAM186AA6NE01 2351 aa14.17□□□□□ -0.14
SNORD3B-1-201ENST00000577988 RIF1Q5UIP0 2472 aaKnown RBP14.17□□□□□ -0.14
SNORD3B-1-201ENST00000577988 IGHV1OR15-9A0A0B4J2B8 117 aa14.16□□□□□ -0.14
SNORD3B-1-201ENST00000577988 LRRD1A4D1F6 860 aa14.16□□□□□ -0.14
SNORD3B-1-201ENST00000577988 C1QTNF3-AMACRE9PGA6 284 aa14.16□□□□□ -0.14
SNORD3B-1-201ENST00000577988 SMAD6O43541 496 aaKnown RBP14.16□□□□□ -0.14
SNORD3B-1-201ENST00000577988 PRAMEF11O60813 436 aa14.16□□□□□ -0.14
SNORD3B-1-201ENST00000577988 PRNPP04156 253 aa14.16□□□□□ -0.14
SNORD3B-1-201ENST00000577988 ZFXP17010 805 aaPredicted RBP14.16□□□□□ -0.14
SNORD3B-1-201ENST00000577988 CD6P30203 668 aa14.16□□□□□ -0.14
SNORD3B-1-201ENST00000577988 GJC1P36383 396 aa14.16□□□□□ -0.14
SNORD3B-1-201ENST00000577988 DPP6P42658 865 aa14.16□□□□□ -0.14
SNORD3B-1-201ENST00000577988 PAPOLAP51003 745 aaKnown RBP14.16□□□□□ -0.14
SNORD3B-1-201ENST00000577988 TPMTP51580 245 aa14.16□□□□□ -0.14
SNORD3B-1-201ENST00000577988 SNRPD1P62314 119 aaKnown RBP14.16□□□□□ -0.14
SNORD3B-1-201ENST00000577988 IL10RBQ08334 325 aa14.16□□□□□ -0.14
SNORD3B-1-201ENST00000577988 SRSF5Q13243 272 aaKnown RBP14.16□□□□□ -0.14
SNORD3B-1-201ENST00000577988 PAFAH1B3Q15102 231 aaKnown RBP14.16□□□□□ -0.14
SNORD3B-1-201ENST00000577988 CST6Q15828 149 aa14.16□□□□□ -0.14
SNORD3B-1-201ENST00000577988 ANKRD20A8PQ5CZ79 823 aa14.16□□□□□ -0.14
SNORD3B-1-201ENST00000577988 CARD16Q5EG05 197 aa14.16□□□□□ -0.14
SNORD3B-1-201ENST00000577988 PMS2CLQ68D20 193 aa14.16□□□□□ -0.14
SNORD3B-1-201ENST00000577988 PRR23BQ6ZRT6 265 aa14.16□□□□□ -0.14
SNORD3B-1-201ENST00000577988 ZNF662Q6ZS27 426 aa14.16□□□□□ -0.14
SNORD3B-1-201ENST00000577988 Q6ZVU0 165 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms