RNA–Protein interactions for RNA: ENST00000577646.5

RARA-208, Transcript of retinoic acid receptor alpha, humanhuman

TSL 5

Gene RARA, Length 733 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RARA-208ENST00000577646 ATP11CQ8NB49 1132 aa12.64□□□□□ -0.39
RARA-208ENST00000577646 OR7D4Q8NG98 312 aa12.64□□□□□ -0.39
RARA-208ENST00000577646 PCDH19Q8TAB3 1148 aa12.64□□□□□ -0.39
RARA-208ENST00000577646 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.64□□□□□ -0.39
RARA-208ENST00000577646 RAPGEF5Q92565 580 aa12.64□□□□□ -0.39
RARA-208ENST00000577646 NKD2Q969F2 451 aaPredicted RBP12.64□□□□□ -0.39
RARA-208ENST00000577646 MYO19Q96H55 970 aa12.64□□□□□ -0.39
RARA-208ENST00000577646 HES6Q96HZ4 224 aa12.64□□□□□ -0.39
RARA-208ENST00000577646 ZNF830Q96NB3 372 aaPredicted RBP12.64□□□□□ -0.39
RARA-208ENST00000577646 TSGA13Q96PP4 275 aa12.64□□□□□ -0.39
RARA-208ENST00000577646 KCNF1Q9H3M0 494 aa12.64□□□□□ -0.39
RARA-208ENST00000577646 NDFIP2Q9NV92 336 aa12.64□□□□□ -0.39
RARA-208ENST00000577646 CACNA2D2Q9NY47 1150 aa12.64□□□□□ -0.39
RARA-208ENST00000577646 AMACRQ9UHK6 382 aa12.64□□□□□ -0.39
RARA-208ENST00000577646 VPS13AQ96RL7 3174 aa12.64□□□□□ -0.39
RARA-208ENST00000577646 A0A1W2PQF6 199 aa12.63□□□□□ -0.39
RARA-208ENST00000577646 K7ESF4 209 aa12.63□□□□□ -0.39
RARA-208ENST00000577646 PRAMEF11O60813 436 aa12.63□□□□□ -0.39
RARA-208ENST00000577646 ZNF217O75362 1048 aa12.63□□□□□ -0.39
RARA-208ENST00000577646 EPHX1P07099 455 aa12.63□□□□□ -0.39
RARA-208ENST00000577646 SRCP12931 536 aa12.63□□□□□ -0.39
RARA-208ENST00000577646 GJC1P36383 396 aa12.63□□□□□ -0.39
RARA-208ENST00000577646 CDKN2BP42772 138 aa12.63□□□□□ -0.39
RARA-208ENST00000577646 RECQLP46063 649 aaPredicted RBP12.63□□□□□ -0.39
RARA-208ENST00000577646 SERPINH1P50454 418 aaKnown RBP12.63□□□□□ -0.39
RARA-208ENST00000577646 SATB1Q01826 763 aa12.63□□□□□ -0.39
RARA-208ENST00000577646 CCDC15Q0P6D6 951 aa12.63□□□□□ -0.39
RARA-208ENST00000577646 ELAVL3Q14576 367 aaKnown RBP12.63□□□□□ -0.39
RARA-208ENST00000577646 DLG2Q15700 870 aa12.63□□□□□ -0.39
RARA-208ENST00000577646 TIGD7Q6NT04 549 aaPredicted RBP12.63□□□□□ -0.39
RARA-208ENST00000577646 SPOCD1Q6ZMY3 1216 aa12.63□□□□□ -0.39
RARA-208ENST00000577646 WDR5BQ86VZ2 330 aa12.63□□□□□ -0.39
RARA-208ENST00000577646 LONP2Q86WA8 852 aa12.63□□□□□ -0.39
RARA-208ENST00000577646 CPNE8Q86YQ8 564 aa12.63□□□□□ -0.39
RARA-208ENST00000577646 ARHGAP12Q8IWW6 846 aa12.63□□□□□ -0.39
RARA-208ENST00000577646 MAML2Q8IZL2 1156 aaPredicted RBP12.63□□□□□ -0.39
RARA-208ENST00000577646 OR2T3Q8NH03 318 aa12.63□□□□□ -0.39
RARA-208ENST00000577646 FRS2Q8WU20 508 aa12.63□□□□□ -0.39
RARA-208ENST00000577646 CYB5D2Q8WUJ1 264 aa12.63□□□□□ -0.39
RARA-208ENST00000577646 NSMCE1Q8WV22 266 aa12.63□□□□□ -0.39
RARA-208ENST00000577646 SORCS1Q8WY21 1168 aa12.63□□□□□ -0.39
RARA-208ENST00000577646 LRIG1Q96JA1 1093 aa12.63□□□□□ -0.39
RARA-208ENST00000577646 ACOX2Q99424 681 aa12.63□□□□□ -0.39
RARA-208ENST00000577646 SLC39A8Q9C0K1 460 aa12.63□□□□□ -0.39
RARA-208ENST00000577646 SEMA4AQ9H3S1 761 aa12.63□□□□□ -0.39
RARA-208ENST00000577646 CD248Q9HCU0 757 aa12.63□□□□□ -0.39
RARA-208ENST00000577646 LZTFL1Q9NQ48 299 aa12.63□□□□□ -0.39
RARA-208ENST00000577646 KCND1Q9NSA2 647 aa12.63□□□□□ -0.39
RARA-208ENST00000577646 ZSCAN32Q9NX65 697 aa12.63□□□□□ -0.39
RARA-208ENST00000577646 TRIM10Q9UDY6 481 aa12.63□□□□□ -0.39
RARA-208ENST00000577646 SLCO3A1Q9UIG8 710 aa12.63□□□□□ -0.39
RARA-208ENST00000577646 PCDHGA2Q9Y5H1 932 aa12.63□□□□□ -0.39
RARA-208ENST00000577646 CHD5Q8TDI0 1954 aa12.63□□□□□ -0.39
RARA-208ENST00000577646 APOL1O14791 398 aa12.62□□□□□ -0.39
RARA-208ENST00000577646 MCF2LO15068 1137 aa12.62□□□□□ -0.39
RARA-208ENST00000577646 GSRP00390 522 aa12.62□□□□□ -0.39
RARA-208ENST00000577646 CD48P09326 243 aa12.62□□□□□ -0.39
RARA-208ENST00000577646 SP9P0CG40 484 aa12.62□□□□□ -0.39
RARA-208ENST00000577646 TDGF1P13385 188 aa12.62□□□□□ -0.39
RARA-208ENST00000577646 TGM2P21980 687 aa12.62□□□□□ -0.39
RARA-208ENST00000577646 CES1P23141 567 aa12.62□□□□□ -0.39
RARA-208ENST00000577646 CCNCP24863 283 aa12.62□□□□□ -0.39
RARA-208ENST00000577646 ACVRL1P37023 503 aa12.62□□□□□ -0.39
RARA-208ENST00000577646 HSPA9P38646 679 aaKnown RBP12.62□□□□□ -0.39
RARA-208ENST00000577646 CSNK1DP48730 415 aa12.62□□□□□ -0.39
RARA-208ENST00000577646 PAPOLAP51003 745 aaKnown RBP12.62□□□□□ -0.39
RARA-208ENST00000577646 RENBPP51606 427 aa12.62□□□□□ -0.39
RARA-208ENST00000577646 ARF5P84085 180 aa12.62□□□□□ -0.39
RARA-208ENST00000577646 CSTF1Q05048 431 aaKnown RBP12.62□□□□□ -0.39
RARA-208ENST00000577646 RAD51Q06609 339 aa12.62□□□□□ -0.39
RARA-208ENST00000577646 NSUN2Q08J23 767 aaKnown RBP eCLIP12.62□□□□□ -0.39
RARA-208ENST00000577646 GALNT2Q10471 571 aa12.62□□□□□ -0.39
RARA-208ENST00000577646 GRM3Q14832 879 aa12.62□□□□□ -0.39
RARA-208ENST00000577646 PDK1Q15118 436 aa12.62□□□□□ -0.39
RARA-208ENST00000577646 ACCSLQ4AC99 568 aa12.62□□□□□ -0.39
RARA-208ENST00000577646 HS1BP3Q53T59 392 aa12.62□□□□□ -0.39
RARA-208ENST00000577646 RALGPS1Q5JS13 557 aa12.62□□□□□ -0.39
RARA-208ENST00000577646 FAM46CQ5VWP2 391 aa12.62□□□□□ -0.39
RARA-208ENST00000577646 PKN3Q6P5Z2 889 aa12.62□□□□□ -0.39
RARA-208ENST00000577646 TMEM92Q6UXU6 159 aa12.62□□□□□ -0.39
RARA-208ENST00000577646 ZNF354CQ86Y25 554 aa12.62□□□□□ -0.39
RARA-208ENST00000577646 REXO1L1PQ8IX06 675 aa12.62□□□□□ -0.39
RARA-208ENST00000577646 BBS5Q8N3I7 341 aa12.62□□□□□ -0.39
RARA-208ENST00000577646 PQLC3Q8N755 202 aa12.62□□□□□ -0.39
RARA-208ENST00000577646 ZBTB44Q8NCP5 570 aa12.62□□□□□ -0.39
RARA-208ENST00000577646 RNF25Q96BH1 459 aaPredicted RBP12.62□□□□□ -0.39
RARA-208ENST00000577646 HMCESQ96FZ2 354 aa12.62□□□□□ -0.39
RARA-208ENST00000577646 RPL10LQ96L21 214 aaKnown RBP12.62□□□□□ -0.39
RARA-208ENST00000577646 RSPH9Q9H1X1 276 aaPredicted RBP12.62□□□□□ -0.39
RARA-208ENST00000577646 PRSS16Q9NQE7 514 aa12.62□□□□□ -0.39
RARA-208ENST00000577646 IPO11Q9UI26 975 aaKnown RBP12.62□□□□□ -0.39
RARA-208ENST00000577646 HYOU1Q9Y4L1 999 aa12.62□□□□□ -0.39
RARA-208ENST00000577646 CAPN6Q9Y6Q1 641 aa12.62□□□□□ -0.39
RARA-208ENST00000577646 RIF1Q5UIP0 2472 aaKnown RBP12.62□□□□□ -0.39
RARA-208ENST00000577646 hCG_1818297A0A087WSY0 165 aa12.61□□□□□ -0.39
RARA-208ENST00000577646 WASH3PC4AMC7 463 aa12.61□□□□□ -0.39
RARA-208ENST00000577646 AXIN1O15169 862 aa12.61□□□□□ -0.39
RARA-208ENST00000577646 KIF5CO60282 957 aa12.61□□□□□ -0.39
RARA-208ENST00000577646 SNAP91O60641 907 aa12.61□□□□□ -0.39
RARA-208ENST00000577646 TJP3O95049 919 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms