RNA–Protein interactions for RNA: ENST00000575426.1

LITAF-217, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 5

Gene LITAF, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-217ENST00000575426 TMCO3Q6UWJ1 677 aa15.53■□□□□ 0.08
LITAF-217ENST00000575426 SLC36A4Q6YBV0 504 aa15.53■□□□□ 0.08
LITAF-217ENST00000575426 CACUL1Q86Y37 369 aa15.53■□□□□ 0.08
LITAF-217ENST00000575426 CPNE8Q86YQ8 564 aa15.53■□□□□ 0.08
LITAF-217ENST00000575426 RHOT1Q8IXI2 618 aa15.53■□□□□ 0.08
LITAF-217ENST00000575426 STK40Q8N2I9 435 aa15.53■□□□□ 0.08
LITAF-217ENST00000575426 GANCQ8TET4 914 aa15.53■□□□□ 0.08
LITAF-217ENST00000575426 CELF6Q96J87 481 aaKnown RBP15.53■□□□□ 0.08
LITAF-217ENST00000575426 CSPG4P5Q96PW8 444 aa15.53■□□□□ 0.08
LITAF-217ENST00000575426 NOL6Q9H6R4 1146 aaKnown RBP15.53■□□□□ 0.08
LITAF-217ENST00000575426 ITM2CQ9NQX7 267 aa15.53■□□□□ 0.08
LITAF-217ENST00000575426 SCML1Q9UN30 329 aa15.53■□□□□ 0.08
LITAF-217ENST00000575426 SMG5Q9UPR3 1016 aaKnown RBP15.53■□□□□ 0.08
LITAF-217ENST00000575426 NCKAP1Q9Y2A7 1128 aa15.53■□□□□ 0.08
LITAF-217ENST00000575426 ALG6Q9Y672 507 aa15.53■□□□□ 0.08
LITAF-217ENST00000575426 BTNL10A8MVZ5 291 aa15.52■□□□□ 0.08
LITAF-217ENST00000575426 DFFAO00273 331 aa15.52■□□□□ 0.08
LITAF-217ENST00000575426 DCLK1O15075 740 aa15.52■□□□□ 0.08
LITAF-217ENST00000575426 PJA2O43164 708 aa15.52■□□□□ 0.08
LITAF-217ENST00000575426 ARHGAP6O43182 974 aa15.52■□□□□ 0.08
LITAF-217ENST00000575426 BUB1BO60566 1050 aaPredicted RBP15.52■□□□□ 0.08
LITAF-217ENST00000575426 ZMPSTE24O75844 475 aa15.52■□□□□ 0.08
LITAF-217ENST00000575426 COMTP21964 271 aa15.52■□□□□ 0.08
LITAF-217ENST00000575426 OXTRP30559 389 aa15.52■□□□□ 0.08
LITAF-217ENST00000575426 SERPINB6P35237 376 aa15.52■□□□□ 0.08
LITAF-217ENST00000575426 SERPINH1P50454 418 aaKnown RBP15.52■□□□□ 0.08
LITAF-217ENST00000575426 DNA2P51530 1060 aa15.52■□□□□ 0.08
LITAF-217ENST00000575426 RPS14P62263 151 aaKnown RBP15.52■□□□□ 0.08
LITAF-217ENST00000575426 ARF5P84085 180 aa15.52■□□□□ 0.08
LITAF-217ENST00000575426 ELAVL3Q14576 367 aaKnown RBP15.52■□□□□ 0.08
LITAF-217ENST00000575426 LPAL2Q16609 132 aa15.52■□□□□ 0.08
LITAF-217ENST00000575426 MAP7D1Q3KQU3 841 aa15.52■□□□□ 0.08
LITAF-217ENST00000575426 LRRC38Q5VT99 294 aa15.52■□□□□ 0.08
LITAF-217ENST00000575426 Q6ZVU0 165 aa15.52■□□□□ 0.08
LITAF-217ENST00000575426 DAAM2Q86T65 1068 aa15.52■□□□□ 0.08
LITAF-217ENST00000575426 MMAAQ8IVH4 418 aaKnown RBP15.52■□□□□ 0.08
LITAF-217ENST00000575426 LRRC8AQ8IWT6 810 aa15.52■□□□□ 0.08
LITAF-217ENST00000575426 PCDH20Q8N6Y1 951 aaKnown RBP15.52■□□□□ 0.08
LITAF-217ENST00000575426 FAM71BQ8TC56 605 aa15.52■□□□□ 0.08
LITAF-217ENST00000575426 FRS2Q8WU20 508 aa15.52■□□□□ 0.08
LITAF-217ENST00000575426 HMCESQ96FZ2 354 aa15.52■□□□□ 0.08
LITAF-217ENST00000575426 CEP44Q9C0F1 390 aa15.52■□□□□ 0.08
LITAF-217ENST00000575426 SLC39A8Q9C0K1 460 aa15.52■□□□□ 0.08
LITAF-217ENST00000575426 RSPH9Q9H1X1 276 aaPredicted RBP15.52■□□□□ 0.08
LITAF-217ENST00000575426 LRRC19Q9H756 370 aa15.52■□□□□ 0.08
LITAF-217ENST00000575426 DDX56Q9NY93 547 aaKnown RBP15.52■□□□□ 0.08
LITAF-217ENST00000575426 GMEB2Q9UKD1 530 aa15.52■□□□□ 0.08
LITAF-217ENST00000575426 CYP8B1Q9UNU6 501 aa15.52■□□□□ 0.08
LITAF-217ENST00000575426 REXO2Q9Y3B8 237 aaKnown RBP15.52■□□□□ 0.08
LITAF-217ENST00000575426 LRRD1A4D1F6 860 aa15.51■□□□□ 0.07
LITAF-217ENST00000575426 RCCD1A6NED2 376 aa15.51■□□□□ 0.07
LITAF-217ENST00000575426 C1QTNF3-AMACRE9PGA6 284 aa15.51■□□□□ 0.07
LITAF-217ENST00000575426 K7ERQ8 282 aa15.51■□□□□ 0.07
LITAF-217ENST00000575426 ALOX15BO15296 676 aa15.51■□□□□ 0.07
LITAF-217ENST00000575426 SMAD6O43541 496 aaKnown RBP15.51■□□□□ 0.07
LITAF-217ENST00000575426 ADH1BP00325 375 aa15.51■□□□□ 0.07
LITAF-217ENST00000575426 IL1BP01584 269 aa15.51■□□□□ 0.07
LITAF-217ENST00000575426 VAV1P15498 845 aa15.51■□□□□ 0.07
LITAF-217ENST00000575426 KDELR1P24390 212 aa15.51■□□□□ 0.07
LITAF-217ENST00000575426 PAPOLAP51003 745 aaKnown RBP15.51■□□□□ 0.07
LITAF-217ENST00000575426 TPMTP51580 245 aa15.51■□□□□ 0.07
LITAF-217ENST00000575426 MMRN1Q13201 1228 aa15.51■□□□□ 0.07
LITAF-217ENST00000575426 DPYSL3Q14195 570 aa15.51■□□□□ 0.07
LITAF-217ENST00000575426 ANKRD20A8PQ5CZ79 823 aa15.51■□□□□ 0.07
LITAF-217ENST00000575426 FAM46CQ5VWP2 391 aa15.51■□□□□ 0.07
LITAF-217ENST00000575426 LAIR1Q6GTX8 287 aa15.51■□□□□ 0.07
LITAF-217ENST00000575426 C22orf39Q6P5X5 142 aa15.51■□□□□ 0.07
LITAF-217ENST00000575426 LPCAT2Q7L5N7 544 aa15.51■□□□□ 0.07
LITAF-217ENST00000575426 KBTBD6Q86V97 674 aa15.51■□□□□ 0.07
LITAF-217ENST00000575426 TPCN2Q8NHX9 752 aa15.51■□□□□ 0.07
LITAF-217ENST00000575426 CASKIN2Q8WXE0 1202 aa15.51■□□□□ 0.07
LITAF-217ENST00000575426 ZC3H10Q96K80 434 aaKnown RBP15.51■□□□□ 0.07
LITAF-217ENST00000575426 FAM129BQ96TA1 746 aa15.51■□□□□ 0.07
LITAF-217ENST00000575426 HINFPQ9BQA5 517 aa15.51■□□□□ 0.07
LITAF-217ENST00000575426 ZNF670Q9BS34 389 aa15.51■□□□□ 0.07
LITAF-217ENST00000575426 DESI2Q9BSY9 194 aa15.51■□□□□ 0.07
LITAF-217ENST00000575426 MAK16Q9BXY0 300 aaKnown RBP15.51■□□□□ 0.07
LITAF-217ENST00000575426 KLHL11Q9NVR0 708 aa15.51■□□□□ 0.07
LITAF-217ENST00000575426 NCDNQ9UBB6 729 aa15.51■□□□□ 0.07
LITAF-217ENST00000575426 SBDSQ9Y3A5 250 aaKnown RBP eCLIP15.51■□□□□ 0.07
LITAF-217ENST00000575426 HYOU1Q9Y4L1 999 aa15.51■□□□□ 0.07
LITAF-217ENST00000575426 SDK1Q7Z5N4 2213 aa15.51■□□□□ 0.07
LITAF-217ENST00000575426 IGHV1OR15-9A0A0B4J2B8 117 aa15.5■□□□□ 0.07
LITAF-217ENST00000575426 MCF2LO15068 1137 aa15.5■□□□□ 0.07
LITAF-217ENST00000575426 KRT1P04264 644 aa15.5■□□□□ 0.07
LITAF-217ENST00000575426 CD48P09326 243 aa15.5■□□□□ 0.07
LITAF-217ENST00000575426 BCKDHBP21953 392 aa15.5■□□□□ 0.07
LITAF-217ENST00000575426 CD6P30203 668 aa15.5■□□□□ 0.07
LITAF-217ENST00000575426 SLC8A1P32418 973 aa15.5■□□□□ 0.07
LITAF-217ENST00000575426 PSMD8P48556 350 aa15.5■□□□□ 0.07
LITAF-217ENST00000575426 ARSEP51690 589 aa15.5■□□□□ 0.07
LITAF-217ENST00000575426 SNRPD1P62314 119 aaKnown RBP15.5■□□□□ 0.07
LITAF-217ENST00000575426 RPL6Q02878 288 aaKnown RBP15.5■□□□□ 0.07
LITAF-217ENST00000575426 CST6Q15828 149 aa15.5■□□□□ 0.07
LITAF-217ENST00000575426 PLK5Q496M5 336 aa15.5■□□□□ 0.07
LITAF-217ENST00000575426 INO80DQ53TQ3 878 aaPredicted RBP15.5■□□□□ 0.07
LITAF-217ENST00000575426 CARD16Q5EG05 197 aa15.5■□□□□ 0.07
LITAF-217ENST00000575426 C11orf63Q6NUN7 778 aa15.5■□□□□ 0.07
LITAF-217ENST00000575426 LEKR1Q6ZMV7 388 aa15.5■□□□□ 0.07
LITAF-217ENST00000575426 RYBPQ8N488 228 aaPredicted RBP15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms