RNA–Protein interactions for RNA: ENST00000574867.5

NUP88-210, Transcript of nucleoporin 88, humanhuman

TSL 2

Gene NUP88, Length 2,081 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-210ENST00000574867 SERPINA13PQ6UXR4 307 aa17.44■□□□□ 0.38
NUP88-210ENST00000574867 CHPFQ8IZ52 775 aa17.44■□□□□ 0.38
NUP88-210ENST00000574867 RASGEF1CQ8N431 466 aa17.44■□□□□ 0.38
NUP88-210ENST00000574867 NETO2Q8NC67 525 aa17.44■□□□□ 0.38
NUP88-210ENST00000574867 ZNF599Q96NL3 588 aa17.44■□□□□ 0.38
NUP88-210ENST00000574867 TSGA13Q96PP4 275 aa17.44■□□□□ 0.38
NUP88-210ENST00000574867 HCN2Q9UL51 889 aa17.44■□□□□ 0.38
NUP88-210ENST00000574867 SLC8A2Q9UPR5 921 aa17.44■□□□□ 0.38
NUP88-210ENST00000574867 CHURC1-FNTBB4DL54 471 aa17.43■□□□□ 0.38
NUP88-210ENST00000574867 MAFKO60675 156 aa17.43■□□□□ 0.38
NUP88-210ENST00000574867 ATG13O75143 517 aa17.43■□□□□ 0.38
NUP88-210ENST00000574867 CLCN5P51795 746 aa17.43■□□□□ 0.38
NUP88-210ENST00000574867 PPIDQ08752 370 aaKnown RBP17.43■□□□□ 0.38
NUP88-210ENST00000574867 ENPP2Q13822 863 aa17.43■□□□□ 0.38
NUP88-210ENST00000574867 NOMO1Q15155 1222 aa17.43■□□□□ 0.38
NUP88-210ENST00000574867 INO80DQ53TQ3 878 aaPredicted RBP17.43■□□□□ 0.38
NUP88-210ENST00000574867 EMC10Q5UCC4 262 aa17.43■□□□□ 0.38
NUP88-210ENST00000574867 SDE2Q6IQ49 451 aa17.43■□□□□ 0.38
NUP88-210ENST00000574867 SYT10Q6XYQ8 523 aa17.43■□□□□ 0.38
NUP88-210ENST00000574867 BMP8AQ7Z5Y6 402 aa17.43■□□□□ 0.38
NUP88-210ENST00000574867 SH2D3CQ8N5H7 860 aa17.43■□□□□ 0.38
NUP88-210ENST00000574867 IL17RCQ8NAC3 791 aa17.43■□□□□ 0.38
NUP88-210ENST00000574867 RPLP0P6Q8NHW5 317 aa17.43■□□□□ 0.38
NUP88-210ENST00000574867 FATE1Q969F0 183 aa17.43■□□□□ 0.38
NUP88-210ENST00000574867 NAP1L3Q99457 506 aaPredicted RBP17.43■□□□□ 0.38
NUP88-210ENST00000574867 CHRDQ9H2X0 955 aa17.43■□□□□ 0.38
NUP88-210ENST00000574867 UBA2Q9UBT2 640 aaPredicted RBP17.43■□□□□ 0.38
NUP88-210ENST00000574867 TTC7AQ9ULT0 858 aaPredicted RBP17.43■□□□□ 0.38
NUP88-210ENST00000574867 MUC3AQ02505 3323 aa17.43■□□□□ 0.38
NUP88-210ENST00000574867 FANCGO15287 622 aa17.43■□□□□ 0.38
NUP88-210ENST00000574867 MAP3K6O95382 1288 aa17.43■□□□□ 0.38
NUP88-210ENST00000574867 FGGP02679 453 aa17.43■□□□□ 0.38
NUP88-210ENST00000574867 CCNCP24863 283 aa17.43■□□□□ 0.38
NUP88-210ENST00000574867 NTSR1P30989 418 aa17.43■□□□□ 0.38
NUP88-210ENST00000574867 STK19P49842 368 aaPredicted RBP17.43■□□□□ 0.38
NUP88-210ENST00000574867 RFTN1Q14699 578 aaPredicted RBP17.43■□□□□ 0.38
NUP88-210ENST00000574867 LINGO4Q6UY18 593 aa17.43■□□□□ 0.38
NUP88-210ENST00000574867 ARHGAP36Q6ZRI8 547 aa17.43■□□□□ 0.38
NUP88-210ENST00000574867 Q6ZS52 159 aa17.43■□□□□ 0.38
NUP88-210ENST00000574867 ALLCQ8N6M5 410 aa17.43■□□□□ 0.38
NUP88-210ENST00000574867 ATP11CQ8NB49 1132 aa17.43■□□□□ 0.38
NUP88-210ENST00000574867 ACTL9Q8TC94 416 aa17.43■□□□□ 0.38
NUP88-210ENST00000574867 NSMCE1Q8WV22 266 aa17.43■□□□□ 0.38
NUP88-210ENST00000574867 HAUS1Q96CS2 278 aa17.43■□□□□ 0.38
NUP88-210ENST00000574867 MYO19Q96H55 970 aa17.43■□□□□ 0.38
NUP88-210ENST00000574867 RPL10LQ96L21 214 aaKnown RBP17.43■□□□□ 0.38
NUP88-210ENST00000574867 FRMD8P1Q9BZ68 369 aaPredicted RBP17.43■□□□□ 0.38
NUP88-210ENST00000574867 CEP44Q9C0F1 390 aa17.43■□□□□ 0.38
NUP88-210ENST00000574867 TMEM245Q9H330 911 aa17.43■□□□□ 0.38
NUP88-210ENST00000574867 SAE1Q9UBE0 346 aaPredicted RBP17.43■□□□□ 0.38
NUP88-210ENST00000574867 SAR1BQ9Y6B6 198 aa17.43■□□□□ 0.38
NUP88-210ENST00000574867 HACD1B0YJ81 288 aa17.42■□□□□ 0.38
NUP88-210ENST00000574867 J3KR12 359 aa17.42■□□□□ 0.38
NUP88-210ENST00000574867 ATP9BO43861 1147 aa17.42■□□□□ 0.38
NUP88-210ENST00000574867 ZNF189O75820 626 aaPredicted RBP17.42■□□□□ 0.38
NUP88-210ENST00000574867 KLF8O95600 359 aaPredicted RBP17.42■□□□□ 0.38
NUP88-210ENST00000574867 SRCP12931 536 aa17.42■□□□□ 0.38
NUP88-210ENST00000574867 IL12RB1P42701 662 aa17.42■□□□□ 0.38
NUP88-210ENST00000574867 OTUD4Q01804 1114 aaKnown RBP17.42■□□□□ 0.38
NUP88-210ENST00000574867 XRCC4Q13426 336 aa17.42■□□□□ 0.38
NUP88-210ENST00000574867 EOGTQ5NDL2 527 aa17.42■□□□□ 0.38
NUP88-210ENST00000574867 TMCO4Q5TGY1 634 aa17.42■□□□□ 0.38
NUP88-210ENST00000574867 CCDC33Q8N5R6 958 aa17.42■□□□□ 0.38
NUP88-210ENST00000574867 CCNYQ8ND76 341 aa17.42■□□□□ 0.38
NUP88-210ENST00000574867 PBXIP1Q96AQ6 731 aa17.42■□□□□ 0.38
NUP88-210ENST00000574867 GABRG3Q99928 467 aa17.42■□□□□ 0.38
NUP88-210ENST00000574867 EPHX3Q9H6B9 360 aa17.42■□□□□ 0.38
NUP88-210ENST00000574867 CACNA2D2Q9NY47 1150 aa17.42■□□□□ 0.38
NUP88-210ENST00000574867 STON1Q9Y6Q2 735 aa17.42■□□□□ 0.38
NUP88-210ENST00000574867 PGRMC1O00264 195 aaKnown RBP17.41■□□□□ 0.38
NUP88-210ENST00000574867 MCF2LO15068 1137 aa17.41■□□□□ 0.38
NUP88-210ENST00000574867 TXNDC5Q8NBS9 432 aaKnown RBP17.41■□□□□ 0.38
NUP88-210ENST00000574867 ACTRT1Q8TDG2 376 aa17.41■□□□□ 0.38
NUP88-210ENST00000574867 COG1Q8WTW3 980 aa17.41■□□□□ 0.38
NUP88-210ENST00000574867 ACOX2Q99424 681 aa17.41■□□□□ 0.38
NUP88-210ENST00000574867 SLCO3A1Q9UIG8 710 aa17.41■□□□□ 0.38
NUP88-210ENST00000574867 MMP17Q9ULZ9 603 aa17.41■□□□□ 0.38
NUP88-210ENST00000574867 SHROOM3Q8TF72 1996 aa17.41■□□□□ 0.38
NUP88-210ENST00000574867 A0A0C4DFX4 3053 aa17.41■□□□□ 0.38
NUP88-210ENST00000574867 CD160O95971 181 aa17.41■□□□□ 0.38
NUP88-210ENST00000574867 MT-CO1P00395 513 aa17.41■□□□□ 0.38
NUP88-210ENST00000574867 LONRF2Q1L5Z9 754 aa17.41■□□□□ 0.38
NUP88-210ENST00000574867 C22orf39Q6P5X5 142 aa17.41■□□□□ 0.38
NUP88-210ENST00000574867 CCDC13Q8IYE1 715 aa17.41■□□□□ 0.38
NUP88-210ENST00000574867 TFB1MQ8WVM0 346 aaKnown RBP17.41■□□□□ 0.38
NUP88-210ENST00000574867 ISG20Q96AZ6 181 aaKnown RBP17.41■□□□□ 0.38
NUP88-210ENST00000574867 QKIQ96PU8 341 aaKnown RBP eCLIP17.41■□□□□ 0.38
NUP88-210ENST00000574867 LGMNQ99538 433 aa17.41■□□□□ 0.38
NUP88-210ENST00000574867 DLGAP2Q9P1A6 1054 aa17.41■□□□□ 0.38
NUP88-210ENST00000574867 CKAP5Q14008 2032 aa17.4■□□□□ 0.38
NUP88-210ENST00000574867 MYO18AQ92614 2054 aaKnown RBP17.4■□□□□ 0.38
NUP88-210ENST00000574867 TCRBV7S2A1N4TA0A589 114 aa17.4■□□□□ 0.38
NUP88-210ENST00000574867 ANTXRLA6NF34 631 aa17.4■□□□□ 0.38
NUP88-210ENST00000574867 MATN3O15232 486 aa17.4■□□□□ 0.38
NUP88-210ENST00000574867 TMCC1O94876 653 aa17.4■□□□□ 0.38
NUP88-210ENST00000574867 DCNP07585 359 aaKnown RBP17.4■□□□□ 0.38
NUP88-210ENST00000574867 PRKD1Q15139 912 aaPredicted RBP17.4■□□□□ 0.38
NUP88-210ENST00000574867 HNRNPA1L2Q32P51 320 aaKnown RBP17.4■□□□□ 0.38
NUP88-210ENST00000574867 CDKL3Q8IVW4 592 aaPredicted RBP17.4■□□□□ 0.38
NUP88-210ENST00000574867 BBS5Q8N3I7 341 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms