RNA–Protein interactions for RNA: ENST00000574501.1

SMG6-215, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

Gene SMG6, Length 2,419 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-215ENST00000574501 SNX31Q8N9S9 440 aa14.65□□□□□ -0.06
SMG6-215ENST00000574501 ACVR1CQ8NER5 493 aa14.65□□□□□ -0.06
SMG6-215ENST00000574501 SREK1Q8WXA9 508 aaKnown RBP14.65□□□□□ -0.06
SMG6-215ENST00000574501 DCPSQ96C86 337 aaKnown RBP14.65□□□□□ -0.06
SMG6-215ENST00000574501 PRMT6Q96LA8 375 aaPredicted RBP14.65□□□□□ -0.06
SMG6-215ENST00000574501 SNRNP25Q9BV90 132 aaKnown RBP14.65□□□□□ -0.06
SMG6-215ENST00000574501 MUC3BQ9H195 1237 aa14.65□□□□□ -0.06
SMG6-215ENST00000574501 TUBA8Q9NY65 449 aaPredicted RBP14.65□□□□□ -0.06
SMG6-215ENST00000574501 ITGB1BP2Q9UKP3 347 aa14.65□□□□□ -0.06
SMG6-215ENST00000574501 MAGED2Q9UNF1 606 aaPredicted RBP14.65□□□□□ -0.06
SMG6-215ENST00000574501 MFHAS1Q9Y4C4 1052 aa14.65□□□□□ -0.06
SMG6-215ENST00000574501 GPC6Q9Y625 555 aaPredicted RBP14.65□□□□□ -0.06
SMG6-215ENST00000574501 C1orf232A0A0U1RR37 186 aa14.65□□□□□ -0.06
SMG6-215ENST00000574501 FAM149AA5PLN7 773 aa14.65□□□□□ -0.06
SMG6-215ENST00000574501 CFAP99D6REC4 459 aa14.65□□□□□ -0.06
SMG6-215ENST00000574501 PGAM1P18669 254 aa14.65□□□□□ -0.06
SMG6-215ENST00000574501 SAT1P21673 171 aa14.65□□□□□ -0.06
SMG6-215ENST00000574501 CYP2F1P24903 491 aa14.65□□□□□ -0.06
SMG6-215ENST00000574501 DCKP27707 260 aa14.65□□□□□ -0.06
SMG6-215ENST00000574501 PTGER2P43116 358 aa14.65□□□□□ -0.06
SMG6-215ENST00000574501 GLRBP48167 497 aa14.65□□□□□ -0.06
SMG6-215ENST00000574501 HEATR6Q6AI08 1181 aaKnown RBP14.65□□□□□ -0.06
SMG6-215ENST00000574501 C17orf50Q8WW18 174 aa14.65□□□□□ -0.06
SMG6-215ENST00000574501 SGF29Q96ES7 293 aa14.65□□□□□ -0.06
SMG6-215ENST00000574501 XYLT2Q9H1B5 865 aa14.65□□□□□ -0.06
SMG6-215ENST00000574501 VPS33BQ9H267 617 aa14.65□□□□□ -0.06
SMG6-215ENST00000574501 OXSMQ9NWU1 459 aa14.65□□□□□ -0.06
SMG6-215ENST00000574501 GID8Q9NWU2 228 aa14.65□□□□□ -0.06
SMG6-215ENST00000574501 NCKIPSDQ9NZQ3 722 aa14.65□□□□□ -0.06
SMG6-215ENST00000574501 SUCOQ9UBS9 1254 aaKnown RBP14.65□□□□□ -0.06
SMG6-215ENST00000574501 SYNPO2Q9UMS6 1093 aa14.65□□□□□ -0.06
SMG6-215ENST00000574501 ZNF831Q5JPB2 1677 aa14.65□□□□□ -0.06
SMG6-215ENST00000574501 PTPRFP10586 1907 aa14.65□□□□□ -0.06
SMG6-215ENST00000574501 LTBP1Q14766 1721 aa14.64□□□□□ -0.07
SMG6-215ENST00000574501 TRIM64CA6NLI5 447 aa14.64□□□□□ -0.07
SMG6-215ENST00000574501 SLC7A1P30825 629 aa14.64□□□□□ -0.07
SMG6-215ENST00000574501 YAP1P46937 504 aaKnown RBP14.64□□□□□ -0.07
SMG6-215ENST00000574501 DGKZQ13574 1117 aa14.64□□□□□ -0.07
SMG6-215ENST00000574501 CCDC14Q49A88 953 aa14.64□□□□□ -0.07
SMG6-215ENST00000574501 PITRM1Q5JRX3 1037 aa14.64□□□□□ -0.07
SMG6-215ENST00000574501 PPP4R4Q6NUP7 873 aa14.64□□□□□ -0.07
SMG6-215ENST00000574501 GALNT18Q6P9A2 607 aa14.64□□□□□ -0.07
SMG6-215ENST00000574501 FAM183BPQ6ZVS7 135 aa14.64□□□□□ -0.07
SMG6-215ENST00000574501 EEPD1Q7L9B9 569 aa14.64□□□□□ -0.07
SMG6-215ENST00000574501 OFCC1Q8IZS5 231 aa14.64□□□□□ -0.07
SMG6-215ENST00000574501 SIX6OS1Q8N1H7 587 aa14.64□□□□□ -0.07
SMG6-215ENST00000574501 CNTD1Q8N815 330 aa14.64□□□□□ -0.07
SMG6-215ENST00000574501 FBXL20Q96IG2 436 aa14.64□□□□□ -0.07
SMG6-215ENST00000574501 FCRL3Q96P31 734 aaPredicted RBP14.64□□□□□ -0.07
SMG6-215ENST00000574501 PDZD7Q9H5P4 517 aa14.64□□□□□ -0.07
SMG6-215ENST00000574501 PXMP2Q9NR77 195 aa14.64□□□□□ -0.07
SMG6-215ENST00000574501 POLRMTO00411 1230 aaKnown RBP14.64□□□□□ -0.07
SMG6-215ENST00000574501 DLGAP1O14490 977 aa14.64□□□□□ -0.07
SMG6-215ENST00000574501 LSM1O15116 133 aaKnown RBP14.64□□□□□ -0.07
SMG6-215ENST00000574501 C2P06681 752 aa14.64□□□□□ -0.07
SMG6-215ENST00000574501 PROZP22891 400 aa14.64□□□□□ -0.07
SMG6-215ENST00000574501 HERC3Q15034 1050 aa14.64□□□□□ -0.07
SMG6-215ENST00000574501 KIZQ2M2Z5 673 aa14.64□□□□□ -0.07
SMG6-215ENST00000574501 LRRC8EQ6NSJ5 796 aa14.64□□□□□ -0.07
SMG6-215ENST00000574501 TMEM214Q6NUQ4 689 aaKnown RBP14.64□□□□□ -0.07
SMG6-215ENST00000574501 KCTD8Q6ZWB6 473 aa14.64□□□□□ -0.07
SMG6-215ENST00000574501 COLGALT1Q8NBJ5 622 aa14.64□□□□□ -0.07
SMG6-215ENST00000574501 ADAMTS16Q8TE57 1224 aa14.64□□□□□ -0.07
SMG6-215ENST00000574501 CANT1Q8WVQ1 401 aa14.64□□□□□ -0.07
SMG6-215ENST00000574501 CYGBQ8WWM9 190 aa14.64□□□□□ -0.07
SMG6-215ENST00000574501 ACDQ96AP0 544 aa14.64□□□□□ -0.07
SMG6-215ENST00000574501 CERS2Q96G23 380 aa14.64□□□□□ -0.07
SMG6-215ENST00000574501 DRC3Q9H069 523 aa14.64□□□□□ -0.07
SMG6-215ENST00000574501 SACM1LQ9NTJ5 587 aa14.64□□□□□ -0.07
SMG6-215ENST00000574501 GNPTGQ9UJJ9 305 aa14.64□□□□□ -0.07
SMG6-215ENST00000574501 ERGIC3Q9Y282 383 aa14.64□□□□□ -0.07
SMG6-215ENST00000574501 FIS1Q9Y3D6 152 aa14.64□□□□□ -0.07
SMG6-215ENST00000574501 HEATR9A2RTY3 570 aa14.63□□□□□ -0.07
SMG6-215ENST00000574501 TPST1O60507 370 aa14.63□□□□□ -0.07
SMG6-215ENST00000574501 RAD17O75943 681 aa14.63□□□□□ -0.07
SMG6-215ENST00000574501 PIGRP01833 764 aa14.63□□□□□ -0.07
SMG6-215ENST00000574501 PSAPP07602 524 aa14.63□□□□□ -0.07
SMG6-215ENST00000574501 GPD2P43304 727 aa14.63□□□□□ -0.07
SMG6-215ENST00000574501 RGS7P49802 495 aa14.63□□□□□ -0.07
SMG6-215ENST00000574501 KCNC4Q03721 635 aa14.63□□□□□ -0.07
SMG6-215ENST00000574501 NSUN2Q08J23 767 aaKnown RBP eCLIP14.63□□□□□ -0.07
SMG6-215ENST00000574501 SEPT6Q14141 434 aa14.63□□□□□ -0.07
SMG6-215ENST00000574501 BCL2A1Q16548 175 aa14.63□□□□□ -0.07
SMG6-215ENST00000574501 C6orf183Q5T699 404 aa14.63□□□□□ -0.07
SMG6-215ENST00000574501 GRTP1Q5TC63 336 aa14.63□□□□□ -0.07
SMG6-215ENST00000574501 SNRNP48Q6IEG0 339 aaKnown RBP14.63□□□□□ -0.07
SMG6-215ENST00000574501 SCAIQ8N9R8 606 aa14.63□□□□□ -0.07
SMG6-215ENST00000574501 ZNF420Q8TAQ5 688 aaPredicted RBP14.63□□□□□ -0.07
SMG6-215ENST00000574501 TAMM41Q96BW9 452 aa14.63□□□□□ -0.07
SMG6-215ENST00000574501 ITPKCQ96DU7 683 aa14.63□□□□□ -0.07
SMG6-215ENST00000574501 LGMNQ99538 433 aa14.63□□□□□ -0.07
SMG6-215ENST00000574501 DOK1Q99704 481 aa14.63□□□□□ -0.07
SMG6-215ENST00000574501 RBBP8Q99708 897 aa14.63□□□□□ -0.07
SMG6-215ENST00000574501 CPNE1Q99829 537 aa14.63□□□□□ -0.07
SMG6-215ENST00000574501 ADI1Q9BV57 179 aa14.63□□□□□ -0.07
SMG6-215ENST00000574501 ACE2Q9BYF1 805 aaPredicted RBP14.63□□□□□ -0.07
SMG6-215ENST00000574501 TASP1Q9H6P5 420 aa14.63□□□□□ -0.07
SMG6-215ENST00000574501 TMEM98Q9Y2Y6 226 aa14.63□□□□□ -0.07
SMG6-215ENST00000574501 TCRBV3S1A0A5B6 114 aa14.63□□□□□ -0.07
SMG6-215ENST00000574501 CLRN2A0PK11 232 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms