RNA–Protein interactions for RNA: ENST00000573989.1

TRAPPC1-206, Transcript of trafficking protein particle complex 1, humanhuman

TSL 2

Gene TRAPPC1, Length 436 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-206ENST00000573989 LACRTQ9GZZ8 138 aa13.04□□□□□ -0.32
TRAPPC1-206ENST00000573989 TFR2Q9UP52 801 aa13.04□□□□□ -0.32
TRAPPC1-206ENST00000573989 ADGRG1Q9Y653 693 aa13.04□□□□□ -0.32
TRAPPC1-206ENST00000573989 R4GN57 208 aa13.04□□□□□ -0.32
TRAPPC1-206ENST00000573989 MACROD2A1Z1Q3 448 aa13.03□□□□□ -0.32
TRAPPC1-206ENST00000573989 DFFAO00273 331 aa13.03□□□□□ -0.32
TRAPPC1-206ENST00000573989 DCLK1O15075 740 aa13.03□□□□□ -0.32
TRAPPC1-206ENST00000573989 ALOX15BO15296 676 aa13.03□□□□□ -0.32
TRAPPC1-206ENST00000573989 ZMPSTE24O75844 475 aa13.03□□□□□ -0.32
TRAPPC1-206ENST00000573989 DNTTP04053 509 aa13.03□□□□□ -0.32
TRAPPC1-206ENST00000573989 KRT1P04264 644 aa13.03□□□□□ -0.32
TRAPPC1-206ENST00000573989 GLDCP23378 1020 aa13.03□□□□□ -0.32
TRAPPC1-206ENST00000573989 OXTRP30559 389 aa13.03□□□□□ -0.32
TRAPPC1-206ENST00000573989 COPAP53621 1224 aa13.03□□□□□ -0.32
TRAPPC1-206ENST00000573989 ARF5P84085 180 aa13.03□□□□□ -0.32
TRAPPC1-206ENST00000573989 DMWDQ09019 674 aa13.03□□□□□ -0.32
TRAPPC1-206ENST00000573989 SERINC3Q13530 473 aa13.03□□□□□ -0.32
TRAPPC1-206ENST00000573989 SIM2Q14190 667 aaPredicted RBP13.03□□□□□ -0.32
TRAPPC1-206ENST00000573989 ATP13A4Q4VNC1 1196 aa13.03□□□□□ -0.32
TRAPPC1-206ENST00000573989 ANKRD20A8PQ5CZ79 823 aa13.03□□□□□ -0.32
TRAPPC1-206ENST00000573989 C9orf64Q5T6V5 341 aa13.03□□□□□ -0.32
TRAPPC1-206ENST00000573989 LRRC49Q8IUZ0 686 aa13.03□□□□□ -0.32
TRAPPC1-206ENST00000573989 PCDH20Q8N6Y1 951 aaKnown RBP13.03□□□□□ -0.32
TRAPPC1-206ENST00000573989 UBE2Q2Q8WVN8 375 aa13.03□□□□□ -0.32
TRAPPC1-206ENST00000573989 TSC1Q92574 1164 aa13.03□□□□□ -0.32
TRAPPC1-206ENST00000573989 PTPRN2Q92932 1015 aa13.03□□□□□ -0.32
TRAPPC1-206ENST00000573989 ISG20Q96AZ6 181 aaKnown RBP13.03□□□□□ -0.32
TRAPPC1-206ENST00000573989 ERLEC1Q96DZ1 483 aa13.03□□□□□ -0.32
TRAPPC1-206ENST00000573989 HMCESQ96FZ2 354 aa13.03□□□□□ -0.32
TRAPPC1-206ENST00000573989 MKRN2Q9H000 416 aaKnown RBP13.03□□□□□ -0.32
TRAPPC1-206ENST00000573989 LRRC19Q9H756 370 aa13.03□□□□□ -0.32
TRAPPC1-206ENST00000573989 SP110Q9HB58 689 aa13.03□□□□□ -0.32
TRAPPC1-206ENST00000573989 CD248Q9HCU0 757 aa13.03□□□□□ -0.32
TRAPPC1-206ENST00000573989 KLHL11Q9NVR0 708 aa13.03□□□□□ -0.32
TRAPPC1-206ENST00000573989 DUSP10Q9Y6W6 482 aa13.03□□□□□ -0.32
TRAPPC1-206ENST00000573989 CEP192Q8TEP8 1941 aa13.02□□□□□ -0.32
TRAPPC1-206ENST00000573989 THADAQ6YHU6 1953 aa13.02□□□□□ -0.32
TRAPPC1-206ENST00000573989 SHROOM3Q8TF72 1996 aa13.02□□□□□ -0.32
TRAPPC1-206ENST00000573989 CCDC66A2RUB6 948 aa13.02□□□□□ -0.33
TRAPPC1-206ENST00000573989 MAP3K13O43283 966 aa13.02□□□□□ -0.33
TRAPPC1-206ENST00000573989 BNIP3LO60238 219 aa13.02□□□□□ -0.33
TRAPPC1-206ENST00000573989 RHOBTB1O94844 696 aa13.02□□□□□ -0.33
TRAPPC1-206ENST00000573989 ADH1BP00325 375 aa13.02□□□□□ -0.33
TRAPPC1-206ENST00000573989 MT-CO1P00395 513 aa13.02□□□□□ -0.33
TRAPPC1-206ENST00000573989 ZFXP17010 805 aaPredicted RBP13.02□□□□□ -0.33
TRAPPC1-206ENST00000573989 CETN2P41208 172 aa13.02□□□□□ -0.33
TRAPPC1-206ENST00000573989 PAPOLAP51003 745 aaKnown RBP13.02□□□□□ -0.33
TRAPPC1-206ENST00000573989 ARSEP51690 589 aa13.02□□□□□ -0.33
TRAPPC1-206ENST00000573989 CCZ1BP86790 482 aa13.02□□□□□ -0.33
TRAPPC1-206ENST00000573989 CCZ1P86791 482 aaPredicted RBP13.02□□□□□ -0.33
TRAPPC1-206ENST00000573989 ELF2Q15723 593 aa13.02□□□□□ -0.33
TRAPPC1-206ENST00000573989 INO80DQ53TQ3 878 aaPredicted RBP13.02□□□□□ -0.33
TRAPPC1-206ENST00000573989 FAM46CQ5VWP2 391 aa13.02□□□□□ -0.33
TRAPPC1-206ENST00000573989 C22orf39Q6P5X5 142 aa13.02□□□□□ -0.33
TRAPPC1-206ENST00000573989 LINGO4Q6UY18 593 aa13.02□□□□□ -0.33
TRAPPC1-206ENST00000573989 SLC36A4Q6YBV0 504 aa13.02□□□□□ -0.33
TRAPPC1-206ENST00000573989 PRR23BQ6ZRT6 265 aa13.02□□□□□ -0.33
TRAPPC1-206ENST00000573989 CPNE8Q86YQ8 564 aa13.02□□□□□ -0.33
TRAPPC1-206ENST00000573989 FRS2Q8WU20 508 aa13.02□□□□□ -0.33
TRAPPC1-206ENST00000573989 NSMCE1Q8WV22 266 aa13.02□□□□□ -0.33
TRAPPC1-206ENST00000573989 NKD2Q969F2 451 aaPredicted RBP13.02□□□□□ -0.33
TRAPPC1-206ENST00000573989 RBM41Q96IZ5 413 aaKnown RBP13.02□□□□□ -0.33
TRAPPC1-206ENST00000573989 CELF6Q96J87 481 aaKnown RBP13.02□□□□□ -0.33
TRAPPC1-206ENST00000573989 ZNF830Q96NB3 372 aaPredicted RBP13.02□□□□□ -0.33
TRAPPC1-206ENST00000573989 SLC39A8Q9C0K1 460 aa13.02□□□□□ -0.33
TRAPPC1-206ENST00000573989 RSPH9Q9H1X1 276 aaPredicted RBP13.02□□□□□ -0.33
TRAPPC1-206ENST00000573989 NOL6Q9H6R4 1146 aaKnown RBP13.02□□□□□ -0.33
TRAPPC1-206ENST00000573989 FAM86C1Q9NVL1 165 aa13.02□□□□□ -0.33
TRAPPC1-206ENST00000573989 UBA2Q9UBT2 640 aaPredicted RBP13.02□□□□□ -0.33
TRAPPC1-206ENST00000573989 RAPGEFL1Q9UHV5 662 aa13.02□□□□□ -0.33
TRAPPC1-206ENST00000573989 SALL4Q9UJQ4 1053 aa13.02□□□□□ -0.33
TRAPPC1-206ENST00000573989 AMFRQ9UKV5 643 aa13.02□□□□□ -0.33
TRAPPC1-206ENST00000573989 NCKAP1Q9Y2A7 1128 aa13.02□□□□□ -0.33
TRAPPC1-206ENST00000573989 HYOU1Q9Y4L1 999 aa13.02□□□□□ -0.33
TRAPPC1-206ENST00000573989 C1QTNF3-AMACRE9PGA6 284 aa13.01□□□□□ -0.33
TRAPPC1-206ENST00000573989 MCF2LO15068 1137 aa13.01□□□□□ -0.33
TRAPPC1-206ENST00000573989 SMAD6O43541 496 aaKnown RBP13.01□□□□□ -0.33
TRAPPC1-206ENST00000573989 NDUFS2O75306 463 aa13.01□□□□□ -0.33
TRAPPC1-206ENST00000573989 ZRANB2O95218 330 aaKnown RBP eCLIP13.01□□□□□ -0.33
TRAPPC1-206ENST00000573989 LMNAP02545 664 aaKnown RBP13.01□□□□□ -0.33
TRAPPC1-206ENST00000573989 PRNPP04156 253 aa13.01□□□□□ -0.33
TRAPPC1-206ENST00000573989 CD48P09326 243 aa13.01□□□□□ -0.33
TRAPPC1-206ENST00000573989 IL4RP24394 825 aa13.01□□□□□ -0.33
TRAPPC1-206ENST00000573989 P2RY2P41231 377 aa13.01□□□□□ -0.33
TRAPPC1-206ENST00000573989 DNA2P51530 1060 aa13.01□□□□□ -0.33
TRAPPC1-206ENST00000573989 RPS14P62263 151 aaKnown RBP13.01□□□□□ -0.33
TRAPPC1-206ENST00000573989 SNRPD1P62314 119 aaKnown RBP13.01□□□□□ -0.33
TRAPPC1-206ENST00000573989 RAD51Q06609 339 aa13.01□□□□□ -0.33
TRAPPC1-206ENST00000573989 IL10RBQ08334 325 aa13.01□□□□□ -0.33
TRAPPC1-206ENST00000573989 CCDC15Q0P6D6 951 aa13.01□□□□□ -0.33
TRAPPC1-206ENST00000573989 MMRN1Q13201 1228 aa13.01□□□□□ -0.33
TRAPPC1-206ENST00000573989 RFTN1Q14699 578 aaPredicted RBP13.01□□□□□ -0.33
TRAPPC1-206ENST00000573989 TMCO4Q5TGY1 634 aa13.01□□□□□ -0.33
TRAPPC1-206ENST00000573989 AFMIDQ63HM1 303 aa13.01□□□□□ -0.33
TRAPPC1-206ENST00000573989 Q6ZVU0 165 aa13.01□□□□□ -0.33
TRAPPC1-206ENST00000573989 PEX26Q7Z412 305 aa13.01□□□□□ -0.33
TRAPPC1-206ENST00000573989 KBTBD6Q86V97 674 aa13.01□□□□□ -0.33
TRAPPC1-206ENST00000573989 PLPP6Q8IY26 295 aa13.01□□□□□ -0.33
TRAPPC1-206ENST00000573989 KATNAL2Q8IYT4 538 aa13.01□□□□□ -0.33
TRAPPC1-206ENST00000573989 RCOR2Q8IZ40 523 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms