RNA–Protein interactions for RNA: ENST00000573577.5

RPAIN-213, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,282 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-213ENST00000573577 OR52K2Q8NGK3 314 aa13.85□□□□□ -0.19
RPAIN-213ENST00000573577 OR2T3Q8NH03 318 aa13.85□□□□□ -0.19
RPAIN-213ENST00000573577 TPCN2Q8NHX9 752 aa13.85□□□□□ -0.19
RPAIN-213ENST00000573577 PRCCQ92733 491 aaPredicted RBP13.85□□□□□ -0.19
RPAIN-213ENST00000573577 ALG14Q96F25 216 aa13.85□□□□□ -0.19
RPAIN-213ENST00000573577 SIPA1Q96FS4 1042 aa13.85□□□□□ -0.19
RPAIN-213ENST00000573577 PDLIM2Q96JY6 352 aa13.85□□□□□ -0.19
RPAIN-213ENST00000573577 LACRTQ9GZZ8 138 aa13.85□□□□□ -0.19
RPAIN-213ENST00000573577 FBRSQ9HAH7 460 aa13.85□□□□□ -0.19
RPAIN-213ENST00000573577 ATP13A1Q9HD20 1204 aa13.85□□□□□ -0.19
RPAIN-213ENST00000573577 PRSS16Q9NQE7 514 aa13.85□□□□□ -0.19
RPAIN-213ENST00000573577 SEMA4GQ9NTN9 838 aa13.85□□□□□ -0.19
RPAIN-213ENST00000573577 DDX56Q9NY93 547 aaKnown RBP13.85□□□□□ -0.19
RPAIN-213ENST00000573577 CWC15Q9P013 229 aaKnown RBP13.85□□□□□ -0.19
RPAIN-213ENST00000573577 SUN2Q9UH99 717 aa13.85□□□□□ -0.19
RPAIN-213ENST00000573577 HPCAL4Q9UM19 191 aa13.85□□□□□ -0.19
RPAIN-213ENST00000573577 ERVW-1Q9UQF0 538 aa13.85□□□□□ -0.19
RPAIN-213ENST00000573577 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.85□□□□□ -0.19
RPAIN-213ENST00000573577 OR51B4Q9Y5P0 310 aa13.85□□□□□ -0.19
RPAIN-213ENST00000573577 ALG6Q9Y672 507 aa13.85□□□□□ -0.19
RPAIN-213ENST00000573577 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.84□□□□□ -0.19
RPAIN-213ENST00000573577 A0A0D9SEW6 157 aa13.84□□□□□ -0.19
RPAIN-213ENST00000573577 CXorf51AA0A1B0GTR3 108 aa13.84□□□□□ -0.19
RPAIN-213ENST00000573577 PSTPIP1O43586 416 aa13.84□□□□□ -0.19
RPAIN-213ENST00000573577 ERCC2P18074 760 aa13.84□□□□□ -0.19
RPAIN-213ENST00000573577 MPLP40238 635 aa13.84□□□□□ -0.19
RPAIN-213ENST00000573577 NDST2P52849 883 aa13.84□□□□□ -0.19
RPAIN-213ENST00000573577 GEMIN4P57678 1058 aaKnown RBP13.84□□□□□ -0.19
RPAIN-213ENST00000573577 TAS2R40P59535 323 aa13.84□□□□□ -0.19
RPAIN-213ENST00000573577 SLC20A2Q08357 652 aa13.84□□□□□ -0.19
RPAIN-213ENST00000573577 DPYSQ14117 519 aa13.84□□□□□ -0.19
RPAIN-213ENST00000573577 HNRNPA1L2Q32P51 320 aaKnown RBP13.84□□□□□ -0.19
RPAIN-213ENST00000573577 PARP15Q460N3 678 aa13.84□□□□□ -0.19
RPAIN-213ENST00000573577 SPDYCQ5MJ68 293 aa13.84□□□□□ -0.19
RPAIN-213ENST00000573577 IL31Q6EBC2 164 aa13.84□□□□□ -0.19
RPAIN-213ENST00000573577 TXNRD3NBQ6F5E7 133 aa13.84□□□□□ -0.19
RPAIN-213ENST00000573577 RETSATQ6NUM9 610 aa13.84□□□□□ -0.19
RPAIN-213ENST00000573577 ZNF354CQ86Y25 554 aa13.84□□□□□ -0.19
RPAIN-213ENST00000573577 CACUL1Q86Y37 369 aa13.84□□□□□ -0.19
RPAIN-213ENST00000573577 TMEFF1Q8IYR6 380 aa13.84□□□□□ -0.19
RPAIN-213ENST00000573577 SYCE1Q8N0S2 351 aa13.84□□□□□ -0.19
RPAIN-213ENST00000573577 UMODL1-AS1Q8N2C9 162 aa13.84□□□□□ -0.19
RPAIN-213ENST00000573577 RNF10Q8N5U6 811 aaKnown RBP13.84□□□□□ -0.19
RPAIN-213ENST00000573577 FAM71BQ8TC56 605 aa13.84□□□□□ -0.19
RPAIN-213ENST00000573577 CSPG4P5Q96PW8 444 aa13.84□□□□□ -0.19
RPAIN-213ENST00000573577 ZNF670Q9BS34 389 aa13.84□□□□□ -0.19
RPAIN-213ENST00000573577 SPON2Q9BUD6 331 aa13.84□□□□□ -0.19
RPAIN-213ENST00000573577 CALN1Q9BXU9 219 aa13.84□□□□□ -0.19
RPAIN-213ENST00000573577 PCDH18Q9HCL0 1135 aa13.84□□□□□ -0.19
RPAIN-213ENST00000573577 CD93Q9NPY3 652 aa13.84□□□□□ -0.19
RPAIN-213ENST00000573577 USP36Q9P275 1121 aaKnown RBP13.84□□□□□ -0.19
RPAIN-213ENST00000573577 DUSP10Q9Y6W6 482 aa13.84□□□□□ -0.19
RPAIN-213ENST00000573577 CKAP5Q14008 2032 aa13.84□□□□□ -0.19
RPAIN-213ENST00000573577 PLXND1Q9Y4D7 1925 aa13.84□□□□□ -0.19
RPAIN-213ENST00000573577 DOCK4Q8N1I0 1966 aa13.83□□□□□ -0.19
RPAIN-213ENST00000573577 SPAG17Q6Q759 2223 aa13.83□□□□□ -0.2
RPAIN-213ENST00000573577 MACROD2A1Z1Q3 448 aa13.83□□□□□ -0.2
RPAIN-213ENST00000573577 BCLAF3A2AJT9 711 aaKnown RBP13.83□□□□□ -0.2
RPAIN-213ENST00000573577 ZSCAN5CA6NGD5 496 aaPredicted RBP13.83□□□□□ -0.2
RPAIN-213ENST00000573577 TTC34A8MYJ7 566 aa13.83□□□□□ -0.2
RPAIN-213ENST00000573577 CBX4O00257 560 aa13.83□□□□□ -0.2
RPAIN-213ENST00000573577 FOXD2O60548 495 aaPredicted RBP13.83□□□□□ -0.2
RPAIN-213ENST00000573577 C7P10643 843 aa13.83□□□□□ -0.2
RPAIN-213ENST00000573577 ACADMP11310 421 aa13.83□□□□□ -0.2
RPAIN-213ENST00000573577 SERPINB6P35237 376 aa13.83□□□□□ -0.2
RPAIN-213ENST00000573577 DHPSP49366 369 aaPredicted RBP13.83□□□□□ -0.2
RPAIN-213ENST00000573577 NUMBP49757 651 aa13.83□□□□□ -0.2
RPAIN-213ENST00000573577 STK19P49842 368 aaPredicted RBP13.83□□□□□ -0.2
RPAIN-213ENST00000573577 RPL6Q02878 288 aaKnown RBP13.83□□□□□ -0.2
RPAIN-213ENST00000573577 CREB5Q02930 508 aa13.83□□□□□ -0.2
RPAIN-213ENST00000573577 LMNB2Q03252 620 aa13.83□□□□□ -0.2
RPAIN-213ENST00000573577 CCDC6Q16204 474 aa13.83□□□□□ -0.2
RPAIN-213ENST00000573577 PLA2G2CQ5R387 149 aa13.83□□□□□ -0.2
RPAIN-213ENST00000573577 TMCO3Q6UWJ1 677 aa13.83□□□□□ -0.2
RPAIN-213ENST00000573577 CYP2U1Q7Z449 544 aa13.83□□□□□ -0.2
RPAIN-213ENST00000573577 VSIG1Q86XK7 387 aa13.83□□□□□ -0.2
RPAIN-213ENST00000573577 CPNE8Q86YQ8 564 aa13.83□□□□□ -0.2
RPAIN-213ENST00000573577 OR7D4Q8NG98 312 aa13.83□□□□□ -0.2
RPAIN-213ENST00000573577 KIAA1524Q8TCG1 905 aa13.83□□□□□ -0.2
RPAIN-213ENST00000573577 TSC1Q92574 1164 aa13.83□□□□□ -0.2
RPAIN-213ENST00000573577 ARHGEF2Q92974 986 aaKnown RBP13.83□□□□□ -0.2
RPAIN-213ENST00000573577 RPL10LQ96L21 214 aaKnown RBP13.83□□□□□ -0.2
RPAIN-213ENST00000573577 PSMB7Q99436 277 aa13.83□□□□□ -0.2
RPAIN-213ENST00000573577 MTG2Q9H4K7 406 aa13.83□□□□□ -0.2
RPAIN-213ENST00000573577 ITM2CQ9NQX7 267 aa13.83□□□□□ -0.2
RPAIN-213ENST00000573577 VPS45Q9NRW7 570 aa13.83□□□□□ -0.2
RPAIN-213ENST00000573577 NDFIP2Q9NV92 336 aa13.83□□□□□ -0.2
RPAIN-213ENST00000573577 VPS51Q9UID3 782 aa13.83□□□□□ -0.2
RPAIN-213ENST00000573577 SLCO3A1Q9UIG8 710 aa13.83□□□□□ -0.2
RPAIN-213ENST00000573577 SALL4Q9UJQ4 1053 aa13.83□□□□□ -0.2
RPAIN-213ENST00000573577 EDDM13A0A1B0GTR0 161 aa13.82□□□□□ -0.2
RPAIN-213ENST00000573577 LRRD1A4D1F6 860 aa13.82□□□□□ -0.2
RPAIN-213ENST00000573577 ARHGAP42A6NI28 874 aa13.82□□□□□ -0.2
RPAIN-213ENST00000573577 ZNF487B1APH4 448 aa13.82□□□□□ -0.2
RPAIN-213ENST00000573577 RASA4BC9J798 803 aa13.82□□□□□ -0.2
RPAIN-213ENST00000573577 RASA4O43374 803 aa13.82□□□□□ -0.2
RPAIN-213ENST00000573577 SIN3BO75182 1162 aa13.82□□□□□ -0.2
RPAIN-213ENST00000573577 IGLV3-19P01714 112 aa13.82□□□□□ -0.2
RPAIN-213ENST00000573577 ZNF806P0C7X5 589 aa13.82□□□□□ -0.2
RPAIN-213ENST00000573577 TNNT1P13805 278 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms