RNA–Protein interactions for RNA: ENST00000572787.1

TOPBP1-210, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 4

Gene TOPBP1, Length 402 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-210ENST00000572787 C1SP09871 688 aa5.16□□□□□ -1.58
TOPBP1-210ENST00000572787 GABRB1P18505 474 aa5.16□□□□□ -1.58
TOPBP1-210ENST00000572787 PSMA5P28066 241 aa5.16□□□□□ -1.58
TOPBP1-210ENST00000572787 ECHS1P30084 290 aa5.16□□□□□ -1.58
TOPBP1-210ENST00000572787 FASLGP48023 281 aa5.16□□□□□ -1.58
TOPBP1-210ENST00000572787 SLC6A11P48066 632 aa5.16□□□□□ -1.58
TOPBP1-210ENST00000572787 SLC11A2P49281 568 aa5.16□□□□□ -1.58
TOPBP1-210ENST00000572787 EPHB4P54760 987 aa5.16□□□□□ -1.58
TOPBP1-210ENST00000572787 FAM189BP81408 668 aa5.16□□□□□ -1.58
TOPBP1-210ENST00000572787 TFAP4Q01664 338 aa5.16□□□□□ -1.58
TOPBP1-210ENST00000572787 MEF2AQ02078 507 aaPredicted RBP5.16□□□□□ -1.58
TOPBP1-210ENST00000572787 NFIAQ12857 509 aa5.16□□□□□ -1.58
TOPBP1-210ENST00000572787 GIT2Q14161 759 aa5.16□□□□□ -1.58
TOPBP1-210ENST00000572787 ZMYND11Q15326 602 aa5.16□□□□□ -1.58
TOPBP1-210ENST00000572787 CYP2A13Q16696 494 aa5.16□□□□□ -1.58
TOPBP1-210ENST00000572787 ERCC6LQ2NKX8 1250 aa5.16□□□□□ -1.58
TOPBP1-210ENST00000572787 LETM2Q2VYF4 491 aa5.16□□□□□ -1.58
TOPBP1-210ENST00000572787 LRIT3Q3SXY7 679 aa5.16□□□□□ -1.58
TOPBP1-210ENST00000572787 HERC4Q5GLZ8 1057 aaPredicted RBP5.16□□□□□ -1.58
TOPBP1-210ENST00000572787 C1orf185Q5T7R7 199 aa5.16□□□□□ -1.58
TOPBP1-210ENST00000572787 SFMBT2Q5VUG0 894 aa5.16□□□□□ -1.58
TOPBP1-210ENST00000572787 PRAMEF18Q5VWM3 479 aa5.16□□□□□ -1.58
TOPBP1-210ENST00000572787 TTC19Q6DKK2 380 aaPredicted RBP5.16□□□□□ -1.58
TOPBP1-210ENST00000572787 C15orf39Q6ZRI6 1047 aa5.16□□□□□ -1.58
TOPBP1-210ENST00000572787 PRR23CQ6ZRP0 262 aa5.16□□□□□ -1.58
TOPBP1-210ENST00000572787 DGLUCYQ7Z3D6 616 aa5.16□□□□□ -1.58
TOPBP1-210ENST00000572787 PNPLA5Q7Z6Z6 429 aaPredicted RBP5.16□□□□□ -1.58
TOPBP1-210ENST00000572787 VASH2Q86V25 355 aa5.16□□□□□ -1.58
TOPBP1-210ENST00000572787 CAND1Q86VP6 1230 aaKnown RBP5.16□□□□□ -1.58
TOPBP1-210ENST00000572787 TXNRD3Q86VQ6 643 aa5.16□□□□□ -1.58
TOPBP1-210ENST00000572787 FAM129CQ86XR2 697 aa5.16□□□□□ -1.58
TOPBP1-210ENST00000572787 WDR49Q8IV35 697 aa5.16□□□□□ -1.58
TOPBP1-210ENST00000572787 CCDC65Q8IXS2 484 aa5.16□□□□□ -1.58
TOPBP1-210ENST00000572787 CLYBLQ8N0X4 340 aa5.16□□□□□ -1.58
TOPBP1-210ENST00000572787 BANPQ8N9N5 519 aa5.16□□□□□ -1.58
TOPBP1-210ENST00000572787 OR8K5Q8NH50 307 aa5.16□□□□□ -1.58
TOPBP1-210ENST00000572787 LILRB4Q8NHJ6 448 aa5.16□□□□□ -1.58
TOPBP1-210ENST00000572787 TNFRSF25Q93038 417 aa5.16□□□□□ -1.58
TOPBP1-210ENST00000572787 SLAMF9Q96A28 289 aa5.16□□□□□ -1.58
TOPBP1-210ENST00000572787 INTS4Q96HW7 963 aaKnown RBP5.16□□□□□ -1.58
TOPBP1-210ENST00000572787 TPD52L3Q96J77 140 aa5.16□□□□□ -1.58
TOPBP1-210ENST00000572787 MAP6Q96JE9 813 aa5.16□□□□□ -1.58
TOPBP1-210ENST00000572787 ARL5BQ96KC2 179 aa5.16□□□□□ -1.58
TOPBP1-210ENST00000572787 HIST1H2AHQ96KK5 128 aa5.16□□□□□ -1.58
TOPBP1-210ENST00000572787 MAP7D2Q96T17 732 aa5.16□□□□□ -1.58
TOPBP1-210ENST00000572787 HNRNPABQ99729 332 aaKnown RBP5.16□□□□□ -1.58
TOPBP1-210ENST00000572787 HIST1H2AJQ99878 128 aa5.16□□□□□ -1.58
TOPBP1-210ENST00000572787 SIKE1Q9BRV8 207 aa5.16□□□□□ -1.58
TOPBP1-210ENST00000572787 TPPP3Q9BW30 176 aa5.16□□□□□ -1.58
TOPBP1-210ENST00000572787 MOV10L1Q9BXT6 1211 aaKnown RBP5.16□□□□□ -1.58
TOPBP1-210ENST00000572787 CPEB1Q9BZB8 566 aaKnown RBP5.16□□□□□ -1.58
TOPBP1-210ENST00000572787 PITHD1Q9GZP4 211 aaPredicted RBP5.16□□□□□ -1.58
TOPBP1-210ENST00000572787 POLR1EQ9GZS1 481 aaKnown RBP5.16□□□□□ -1.58
TOPBP1-210ENST00000572787 XYLT2Q9H1B5 865 aa5.16□□□□□ -1.58
TOPBP1-210ENST00000572787 FAM83DQ9H4H8 585 aa5.16□□□□□ -1.58
TOPBP1-210ENST00000572787 HAUS4Q9H6D7 363 aa5.16□□□□□ -1.58
TOPBP1-210ENST00000572787 ZNF552Q9H707 407 aaPredicted RBP5.16□□□□□ -1.58
TOPBP1-210ENST00000572787 NRDE2Q9H7Z3 1164 aa5.16□□□□□ -1.58
TOPBP1-210ENST00000572787 SYNPO2LQ9H987 977 aa5.16□□□□□ -1.58
TOPBP1-210ENST00000572787 NGBQ9NPG2 151 aa5.16□□□□□ -1.58
TOPBP1-210ENST00000572787 HPS4Q9NQG7 708 aa5.16□□□□□ -1.58
TOPBP1-210ENST00000572787 PRMT8Q9NR22 394 aaPredicted RBP5.16□□□□□ -1.58
TOPBP1-210ENST00000572787 SDAD1Q9NVU7 687 aaKnown RBP eCLIP5.16□□□□□ -1.58
TOPBP1-210ENST00000572787 IL1RAPL1Q9NZN1 696 aa5.16□□□□□ -1.58
TOPBP1-210ENST00000572787 FTSJ1Q9UET6 329 aa5.16□□□□□ -1.58
TOPBP1-210ENST00000572787 STK39Q9UEW8 545 aa5.16□□□□□ -1.58
TOPBP1-210ENST00000572787 IPO11Q9UI26 975 aaKnown RBP5.16□□□□□ -1.58
TOPBP1-210ENST00000572787 PADI1Q9ULC6 663 aa5.16□□□□□ -1.58
TOPBP1-210ENST00000572787 NENFQ9UMX5 172 aa5.16□□□□□ -1.58
TOPBP1-210ENST00000572787 SNX6Q9UNH7 406 aa5.16□□□□□ -1.58
TOPBP1-210ENST00000572787 STRAPQ9Y3F4 350 aaKnown RBP5.16□□□□□ -1.58
TOPBP1-210ENST00000572787 ADAM18Q9Y3Q7 739 aa5.16□□□□□ -1.58
TOPBP1-210ENST00000572787 PLEKHM1Q9Y4G2 1056 aa5.16□□□□□ -1.58
TOPBP1-210ENST00000572787 LIPGQ9Y5X9 500 aa5.16□□□□□ -1.58
TOPBP1-210ENST00000572787 GMEB1Q9Y692 573 aa5.16□□□□□ -1.58
TOPBP1-210ENST00000572787 U3KQV3 271 aa5.16□□□□□ -1.58
TOPBP1-210ENST00000572787 SPACA6W5XKT8 324 aa5.16□□□□□ -1.58
TOPBP1-210ENST00000572787 A0A0A0MRY4 1105 aa5.15□□□□□ -1.59
TOPBP1-210ENST00000572787 A0A0A6YYJ9 748 aa5.15□□□□□ -1.59
TOPBP1-210ENST00000572787 FOXO6A8MYZ6 492 aa5.15□□□□□ -1.59
TOPBP1-210ENST00000572787 TEX22C9J3V5 150 aa5.15□□□□□ -1.59
TOPBP1-210ENST00000572787 CAPN5O15484 640 aaPredicted RBP5.15□□□□□ -1.59
TOPBP1-210ENST00000572787 MTX2O75431 263 aa5.15□□□□□ -1.59
TOPBP1-210ENST00000572787 TADA2AO75478 443 aa5.15□□□□□ -1.59
TOPBP1-210ENST00000572787 RPP40O75818 363 aaKnown RBP5.15□□□□□ -1.59
TOPBP1-210ENST00000572787 PTBP3O95758 552 aaKnown RBP5.15□□□□□ -1.59
TOPBP1-210ENST00000572787 AK1P00568 194 aa5.15□□□□□ -1.59
TOPBP1-210ENST00000572787 KRT6BP04259 564 aa5.15□□□□□ -1.59
TOPBP1-210ENST00000572787 GLI1P08151 1106 aa5.15□□□□□ -1.59
TOPBP1-210ENST00000572787 FGF4P08620 206 aa5.15□□□□□ -1.59
TOPBP1-210ENST00000572787 CYP21A2P08686 494 aa5.15□□□□□ -1.59
TOPBP1-210ENST00000572787 GNAI3P08754 354 aa5.15□□□□□ -1.59
TOPBP1-210ENST00000572787 RALAP11233 206 aa5.15□□□□□ -1.59
TOPBP1-210ENST00000572787 ZNF3P17036 446 aa5.15□□□□□ -1.59
TOPBP1-210ENST00000572787 AGAP20933 346 aa5.15□□□□□ -1.59
TOPBP1-210ENST00000572787 ENDOUP21128 410 aaKnown RBP5.15□□□□□ -1.59
TOPBP1-210ENST00000572787 MYF6P23409 242 aa5.15□□□□□ -1.59
TOPBP1-210ENST00000572787 FPR2P25090 351 aa5.15□□□□□ -1.59
TOPBP1-210ENST00000572787 MC5RP33032 325 aa5.15□□□□□ -1.59
TOPBP1-210ENST00000572787 S100A5P33763 92 aa5.15□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms