RNA–Protein interactions for RNA: ENST00000572579.1

CHD3-214, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 931 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-214ENST00000572579 PIP5KL1Q5T9C9 394 aa18.56■□□□□ 0.56
CHD3-214ENST00000572579 TMPRSS7Q7RTY8 843 aa18.56■□□□□ 0.56
CHD3-214ENST00000572579 ADAT2Q7Z6V5 191 aaKnown RBP18.56■□□□□ 0.56
CHD3-214ENST00000572579 SETD3Q86TU7 594 aaPredicted RBP18.56■□□□□ 0.56
CHD3-214ENST00000572579 FAM131BQ86XD5 332 aa18.56■□□□□ 0.56
CHD3-214ENST00000572579 SAP25Q8TEE9 199 aa18.56■□□□□ 0.56
CHD3-214ENST00000572579 HAPLN3Q96S86 360 aa18.56■□□□□ 0.56
CHD3-214ENST00000572579 CDC6Q99741 560 aa18.56■□□□□ 0.56
CHD3-214ENST00000572579 HSD3B7Q9H2F3 369 aa18.56■□□□□ 0.56
CHD3-214ENST00000572579 AASDHPPTQ9NRN7 309 aa18.56■□□□□ 0.56
CHD3-214ENST00000572579 FAM207AQ9NSI2 230 aaPredicted RBP18.56■□□□□ 0.56
CHD3-214ENST00000572579 SLC25A13Q9UJS0 675 aa18.56■□□□□ 0.56
CHD3-214ENST00000572579 APOBEC2Q9Y235 224 aaKnown RBP18.56■□□□□ 0.56
CHD3-214ENST00000572579 PLXNB3Q9ULL4 1909 aa18.55■□□□□ 0.56
CHD3-214ENST00000572579 TLR4O00206 839 aa18.55■□□□□ 0.56
CHD3-214ENST00000572579 TNFSF14O43557 240 aa18.55■□□□□ 0.56
CHD3-214ENST00000572579 BNIP3LO60238 219 aa18.55■□□□□ 0.56
CHD3-214ENST00000572579 SRGAP2O75044 1071 aa18.55■□□□□ 0.56
CHD3-214ENST00000572579 GRK6P43250 576 aa18.55■□□□□ 0.56
CHD3-214ENST00000572579 NXPH1P58417 271 aa18.55■□□□□ 0.56
CHD3-214ENST00000572579 CDR2Q01850 454 aa18.55■□□□□ 0.56
CHD3-214ENST00000572579 BNIP3Q12983 259 aa18.55■□□□□ 0.56
CHD3-214ENST00000572579 C15orf59Q2T9L4 293 aaPredicted RBP18.55■□□□□ 0.56
CHD3-214ENST00000572579 ARCQ7LC44 396 aa18.55■□□□□ 0.56
CHD3-214ENST00000572579 APTXQ7Z2E3 356 aaKnown RBP18.55■□□□□ 0.56
CHD3-214ENST00000572579 KANSL1Q7Z3B3 1105 aa18.55■□□□□ 0.56
CHD3-214ENST00000572579 JOSD2Q8TAC2 188 aa18.55■□□□□ 0.56
CHD3-214ENST00000572579 NLRC4Q9NPP4 1024 aa18.55■□□□□ 0.56
CHD3-214ENST00000572579 METTL5Q9NRN9 209 aaKnown RBP18.55■□□□□ 0.56
CHD3-214ENST00000572579 NDFIP2Q9NV92 336 aa18.55■□□□□ 0.56
CHD3-214ENST00000572579 NEU3Q9UQ49 428 aa18.55■□□□□ 0.56
CHD3-214ENST00000572579 FAM72CH0Y354 149 aa18.54■□□□□ 0.56
CHD3-214ENST00000572579 ALOX15BO15296 676 aa18.54■□□□□ 0.56
CHD3-214ENST00000572579 SLC7A4O43246 635 aa18.54■□□□□ 0.56
CHD3-214ENST00000572579 UNGP13051 313 aaPredicted RBP18.54■□□□□ 0.56
CHD3-214ENST00000572579 CHRNA3P32297 505 aa18.54■□□□□ 0.56
CHD3-214ENST00000572579 SOX5P35711 763 aa18.54■□□□□ 0.56
CHD3-214ENST00000572579 ATP11AP98196 1134 aa18.54■□□□□ 0.56
CHD3-214ENST00000572579 FAM72AQ5TYM5 149 aa18.54■□□□□ 0.56
CHD3-214ENST00000572579 MANEALQ5VSG8 457 aa18.54■□□□□ 0.56
CHD3-214ENST00000572579 FAM46CQ5VWP2 391 aa18.54■□□□□ 0.56
CHD3-214ENST00000572579 FAM72DQ6L9T8 149 aa18.54■□□□□ 0.56
CHD3-214ENST00000572579 TRIM69Q86WT6 500 aa18.54■□□□□ 0.56
CHD3-214ENST00000572579 FAM72BQ86X60 149 aa18.54■□□□□ 0.56
CHD3-214ENST00000572579 DCAF4L2Q8NA75 395 aa18.54■□□□□ 0.56
CHD3-214ENST00000572579 ATP11CQ8NB49 1132 aa18.54■□□□□ 0.56
CHD3-214ENST00000572579 RXFP2Q8WXD0 754 aa18.54■□□□□ 0.56
CHD3-214ENST00000572579 PPP1R9BQ96SB3 815 aa18.54■□□□□ 0.56
CHD3-214ENST00000572579 TNKS2Q9H2K2 1166 aa18.54■□□□□ 0.56
CHD3-214ENST00000572579 KDM4CQ9H3R0 1056 aa18.54■□□□□ 0.56
CHD3-214ENST00000572579 PLXNA2O75051 1894 aa18.54■□□□□ 0.56
CHD3-214ENST00000572579 FAM149AA5PLN7 773 aa18.53■□□□□ 0.56
CHD3-214ENST00000572579 C2CD4BA6NLJ0 364 aa18.53■□□□□ 0.56
CHD3-214ENST00000572579 DFNA5O60443 496 aa18.53■□□□□ 0.56
CHD3-214ENST00000572579 OR1E1P30953 314 aa18.53■□□□□ 0.56
CHD3-214ENST00000572579 ADRA1BP35368 520 aa18.53■□□□□ 0.56
CHD3-214ENST00000572579 CLDN6P56747 220 aa18.53■□□□□ 0.56
CHD3-214ENST00000572579 ARF5P84085 180 aa18.53■□□□□ 0.56
CHD3-214ENST00000572579 CAMK2BQ13554 666 aa18.53■□□□□ 0.56
CHD3-214ENST00000572579 NCAPHQ15003 741 aa18.53■□□□□ 0.56
CHD3-214ENST00000572579 NAPEPLDQ6IQ20 393 aa18.53■□□□□ 0.56
CHD3-214ENST00000572579 DPY19L3Q6ZPD9 716 aa18.53■□□□□ 0.56
CHD3-214ENST00000572579 MFSD2AQ8NA29 543 aa18.53■□□□□ 0.56
CHD3-214ENST00000572579 TMEM131Q92545 1883 aa18.53■□□□□ 0.56
CHD3-214ENST00000572579 KLK6Q92876 244 aa18.53■□□□□ 0.56
CHD3-214ENST00000572579 C2orf49Q9BVC5 232 aaPredicted RBP18.53■□□□□ 0.56
CHD3-214ENST00000572579 ILVBLA1L0T0 632 aa18.52■□□□□ 0.56
CHD3-214ENST00000572579 LRRC10BA6NIK2 292 aa18.52■□□□□ 0.56
CHD3-214ENST00000572579 ACVRL1P37023 503 aa18.52■□□□□ 0.56
CHD3-214ENST00000572579 RXRGP48443 463 aa18.52■□□□□ 0.56
CHD3-214ENST00000572579 COPB1P53618 953 aaKnown RBP18.52■□□□□ 0.56
CHD3-214ENST00000572579 KRT83P78385 493 aa18.52■□□□□ 0.56
CHD3-214ENST00000572579 DNAJC3Q13217 504 aa18.52■□□□□ 0.56
CHD3-214ENST00000572579 SMAD1Q15797 465 aaKnown RBP18.52■□□□□ 0.56
CHD3-214ENST00000572579 ARSIQ5FYB1 569 aa18.52■□□□□ 0.56
CHD3-214ENST00000572579 LRRC31Q6UY01 552 aa18.52■□□□□ 0.56
CHD3-214ENST00000572579 DSG4Q86SJ6 1040 aa18.52■□□□□ 0.56
CHD3-214ENST00000572579 PRPF39Q86UA1 669 aaKnown RBP18.52■□□□□ 0.56
CHD3-214ENST00000572579 NLRP14Q86W24 1093 aa18.52■□□□□ 0.56
CHD3-214ENST00000572579 PROSER1Q86XN7 944 aa18.52■□□□□ 0.56
CHD3-214ENST00000572579 ZNF677Q86XU0 584 aa18.52■□□□□ 0.56
CHD3-214ENST00000572579 TMEM145Q8NBT3 493 aa18.52■□□□□ 0.56
CHD3-214ENST00000572579 TMIEQ8NEW7 156 aa18.52■□□□□ 0.56
CHD3-214ENST00000572579 MDM1Q8TC05 714 aa18.52■□□□□ 0.56
CHD3-214ENST00000572579 CENPIQ92674 756 aaPredicted RBP18.52■□□□□ 0.56
CHD3-214ENST00000572579 C11orf70Q9BRQ4 267 aa18.52■□□□□ 0.56
CHD3-214ENST00000572579 SPON2Q9BUD6 331 aa18.52■□□□□ 0.56
CHD3-214ENST00000572579 GDF3Q9NR23 364 aa18.52■□□□□ 0.56
CHD3-214ENST00000572579 PPARGC1AQ9UBK2 798 aaKnown RBP18.52■□□□□ 0.56
CHD3-214ENST00000572579 ZFR2Q9UPR6 939 aaKnown RBP18.52■□□□□ 0.56
CHD3-214ENST00000572579 WASF2Q9Y6W5 498 aa18.52■□□□□ 0.56
CHD3-214ENST00000572579 APC2O95996 2303 aa18.51■□□□□ 0.55
CHD3-214ENST00000572579 ANKRD11Q6UB99 2663 aaPredicted RBP18.51■□□□□ 0.55
CHD3-214ENST00000572579 TCRBV5S1A1TA0A578 114 aa18.51■□□□□ 0.55
CHD3-214ENST00000572579 EPHA8P29322 1005 aaPredicted RBP18.51■□□□□ 0.55
CHD3-214ENST00000572579 HDAC4P56524 1084 aa18.51■□□□□ 0.55
CHD3-214ENST00000572579 GNA12Q03113 381 aa18.51■□□□□ 0.55
CHD3-214ENST00000572579 SYCP1Q15431 976 aa18.51■□□□□ 0.55
CHD3-214ENST00000572579 ZNF284Q2VY69 593 aa18.51■□□□□ 0.55
CHD3-214ENST00000572579 C6orf118Q5T5N4 469 aa18.51■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms