RNA–Protein interactions for RNA: ENST00000572205.5

SMG6-210, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-210ENST00000572205 RHOQP17081 205 aa8.89□□□□□ -0.99
SMG6-210ENST00000572205 MIPP30301 263 aa8.89□□□□□ -0.99
SMG6-210ENST00000572205 EIF4A3P38919 411 aaKnown RBP8.89□□□□□ -0.99
SMG6-210ENST00000572205 MAPKAPK2P49137 400 aa8.89□□□□□ -0.99
SMG6-210ENST00000572205 SERPINH1P50454 418 aaKnown RBP8.89□□□□□ -0.99
SMG6-210ENST00000572205 ARSEP51690 589 aa8.89□□□□□ -0.99
SMG6-210ENST00000572205 AIF1P55008 147 aa8.89□□□□□ -0.99
SMG6-210ENST00000572205 TAS2R38P59533 333 aa8.89□□□□□ -0.99
SMG6-210ENST00000572205 GNA12Q03113 381 aa8.89□□□□□ -0.99
SMG6-210ENST00000572205 GFPT1Q06210 699 aaPredicted RBP8.89□□□□□ -0.99
SMG6-210ENST00000572205 DPYSQ14117 519 aa8.89□□□□□ -0.99
SMG6-210ENST00000572205 STARD3Q14849 445 aa8.89□□□□□ -0.99
SMG6-210ENST00000572205 SLC18A3Q16572 532 aa8.89□□□□□ -0.99
SMG6-210ENST00000572205 CRTC2Q53ET0 693 aaPredicted RBP8.89□□□□□ -0.99
SMG6-210ENST00000572205 TDRD12Q587J7 1177 aaKnown RBP8.89□□□□□ -0.99
SMG6-210ENST00000572205 ACBD5Q5T8D3 534 aaPredicted RBP8.89□□□□□ -0.99
SMG6-210ENST00000572205 AGBL4Q5VU57 503 aa8.89□□□□□ -0.99
SMG6-210ENST00000572205 PPP1R2P3Q6NXS1 205 aa8.89□□□□□ -0.99
SMG6-210ENST00000572205 LYPD8Q6UX82 237 aa8.89□□□□□ -0.99
SMG6-210ENST00000572205 KIAA1324Q6UXG2 1013 aaKnown RBP8.89□□□□□ -0.99
SMG6-210ENST00000572205 LINGO4Q6UY18 593 aa8.89□□□□□ -0.99
SMG6-210ENST00000572205 ZNF783Q6ZMS7 281 aa8.89□□□□□ -0.99
SMG6-210ENST00000572205 Q6ZVU0 165 aa8.89□□□□□ -0.99
SMG6-210ENST00000572205 ARMCX6Q7L4S7 300 aa8.89□□□□□ -0.99
SMG6-210ENST00000572205 C11orf74Q86VG3 221 aa8.89□□□□□ -0.99
SMG6-210ENST00000572205 TP53INP2Q8IXH6 220 aa8.89□□□□□ -0.99
SMG6-210ENST00000572205 DRC7Q8IY82 874 aa8.89□□□□□ -0.99
SMG6-210ENST00000572205 STK40Q8N2I9 435 aa8.89□□□□□ -0.99
SMG6-210ENST00000572205 RTL3Q8N8U3 475 aaKnown RBP8.89□□□□□ -0.99
SMG6-210ENST00000572205 OR2A12Q8NGT7 310 aa8.89□□□□□ -0.99
SMG6-210ENST00000572205 FAM71BQ8TC56 605 aa8.89□□□□□ -0.99
SMG6-210ENST00000572205 CPLX3Q8WVH0 158 aa8.89□□□□□ -0.99
SMG6-210ENST00000572205 DNASE2BQ8WZ79 361 aa8.89□□□□□ -0.99
SMG6-210ENST00000572205 ARHGEF2Q92974 986 aaKnown RBP8.89□□□□□ -0.99
SMG6-210ENST00000572205 RNF34Q969K3 372 aa8.89□□□□□ -0.99
SMG6-210ENST00000572205 TBC1D31Q96DN5 1066 aa8.89□□□□□ -0.99
SMG6-210ENST00000572205 SIPA1Q96FS4 1042 aa8.89□□□□□ -0.99
SMG6-210ENST00000572205 TOE1Q96GM8 510 aaKnown RBP8.89□□□□□ -0.99
SMG6-210ENST00000572205 NSMCE3Q96MG7 304 aa8.89□□□□□ -0.99
SMG6-210ENST00000572205 HSPA12BQ96MM6 686 aa8.89□□□□□ -0.99
SMG6-210ENST00000572205 PABPC3Q9H361 631 aaKnown RBP8.89□□□□□ -0.99
SMG6-210ENST00000572205 C6orf106Q9H6K1 298 aaPredicted RBP8.89□□□□□ -0.99
SMG6-210ENST00000572205 FBRSQ9HAH7 460 aa8.89□□□□□ -0.99
SMG6-210ENST00000572205 EBF2Q9HAK2 575 aa8.89□□□□□ -0.99
SMG6-210ENST00000572205 PARVAQ9NVD7 372 aa8.89□□□□□ -0.99
SMG6-210ENST00000572205 BCCIPQ9P287 314 aaKnown RBP eCLIP8.89□□□□□ -0.99
SMG6-210ENST00000572205 SLC12A6Q9UHW9 1150 aa8.89□□□□□ -0.99
SMG6-210ENST00000572205 GMEB2Q9UKD1 530 aa8.89□□□□□ -0.99
SMG6-210ENST00000572205 LUC7L2Q9Y383 392 aaKnown RBP8.89□□□□□ -0.99
SMG6-210ENST00000572205 PAXBP1Q9Y5B6 917 aa8.89□□□□□ -0.99
SMG6-210ENST00000572205 WASF2Q9Y6W5 498 aa8.89□□□□□ -0.99
SMG6-210ENST00000572205 USP24Q9UPU5 2620 aa8.89□□□□□ -0.99
SMG6-210ENST00000572205 LAMA5O15230 3695 aa8.89□□□□□ -0.99
SMG6-210ENST00000572205 TRPM6Q9BX84 2022 aa8.88□□□□□ -0.99
SMG6-210ENST00000572205 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP8.88□□□□□ -0.99
SMG6-210ENST00000572205 EDDM13A0A1B0GTR0 161 aa8.88□□□□□ -0.99
SMG6-210ENST00000572205 CXorf51AA0A1B0GTR3 108 aa8.88□□□□□ -0.99
SMG6-210ENST00000572205 TARSL2A2RTX5 802 aaKnown RBP8.88□□□□□ -0.99
SMG6-210ENST00000572205 CDX4O14627 284 aaPredicted RBP8.88□□□□□ -0.99
SMG6-210ENST00000572205 MID1O15344 667 aa8.88□□□□□ -0.99
SMG6-210ENST00000572205 SRGAP2O75044 1071 aa8.88□□□□□ -0.99
SMG6-210ENST00000572205 ZNF217O75362 1048 aa8.88□□□□□ -0.99
SMG6-210ENST00000572205 GJB3O75712 270 aa8.88□□□□□ -0.99
SMG6-210ENST00000572205 MYBL1P10243 752 aa8.88□□□□□ -0.99
SMG6-210ENST00000572205 PSMA2P25787 234 aa8.88□□□□□ -0.99
SMG6-210ENST00000572205 CD6P30203 668 aa8.88□□□□□ -0.99
SMG6-210ENST00000572205 PCK1P35558 622 aa8.88□□□□□ -0.99
SMG6-210ENST00000572205 LIMK1P53667 647 aa8.88□□□□□ -0.99
SMG6-210ENST00000572205 GALCP54803 685 aa8.88□□□□□ -0.99
SMG6-210ENST00000572205 ADKP55263 362 aaKnown RBP8.88□□□□□ -0.99
SMG6-210ENST00000572205 TPM4P67936 248 aa8.88□□□□□ -0.99
SMG6-210ENST00000572205 RPL6Q02878 288 aaKnown RBP8.88□□□□□ -0.99
SMG6-210ENST00000572205 ZBTB16Q05516 673 aa8.88□□□□□ -0.99
SMG6-210ENST00000572205 ZNF177Q13360 481 aaPredicted RBP8.88□□□□□ -0.99
SMG6-210ENST00000572205 TRIM14Q14142 442 aa8.88□□□□□ -0.99
SMG6-210ENST00000572205 ELAVL3Q14576 367 aaKnown RBP8.88□□□□□ -0.99
SMG6-210ENST00000572205 ELF2Q15723 593 aa8.88□□□□□ -0.99
SMG6-210ENST00000572205 CST6Q15828 149 aa8.88□□□□□ -0.99
SMG6-210ENST00000572205 DPYSL2Q16555 572 aa8.88□□□□□ -0.99
SMG6-210ENST00000572205 PIP5KL1Q5T9C9 394 aa8.88□□□□□ -0.99
SMG6-210ENST00000572205 ZNF776Q68DI1 518 aaPredicted RBP8.88□□□□□ -0.99
SMG6-210ENST00000572205 DESI1Q6ICB0 168 aa8.88□□□□□ -0.99
SMG6-210ENST00000572205 C22orf39Q6P5X5 142 aa8.88□□□□□ -0.99
SMG6-210ENST00000572205 ALKBH5Q6P6C2 394 aaKnown RBP8.88□□□□□ -0.99
SMG6-210ENST00000572205 DNAJC14Q6Y2X3 702 aaPredicted RBP8.88□□□□□ -0.99
SMG6-210ENST00000572205 SLFN11Q7Z7L1 901 aa8.88□□□□□ -0.99
SMG6-210ENST00000572205 TMEM139Q8IV31 216 aa8.88□□□□□ -0.99
SMG6-210ENST00000572205 UMODL1-AS1Q8N2C9 162 aa8.88□□□□□ -0.99
SMG6-210ENST00000572205 CHST14Q8NCH0 376 aa8.88□□□□□ -0.99
SMG6-210ENST00000572205 SPACA7Q96KW9 195 aa8.88□□□□□ -0.99
SMG6-210ENST00000572205 FSCN3Q9NQT6 498 aa8.88□□□□□ -0.99
SMG6-210ENST00000572205 VPS45Q9NRW7 570 aa8.88□□□□□ -0.99
SMG6-210ENST00000572205 ETNK2Q9NVF9 386 aa8.88□□□□□ -0.99
SMG6-210ENST00000572205 EVLQ9UI08 416 aaPredicted RBP8.88□□□□□ -0.99
SMG6-210ENST00000572205 VPS28Q9UK41 221 aa8.88□□□□□ -0.99
SMG6-210ENST00000572205 PPM1HQ9ULR3 514 aa8.88□□□□□ -0.99
SMG6-210ENST00000572205 AP4E1Q9UPM8 1137 aa8.88□□□□□ -0.99
SMG6-210ENST00000572205 BZW2Q9Y6E2 419 aaKnown RBP8.88□□□□□ -0.99
SMG6-210ENST00000572205 SCINQ9Y6U3 715 aa8.88□□□□□ -0.99
SMG6-210ENST00000572205 ARID1BQ8NFD5 2236 aaPredicted RBP8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms