RNA–Protein interactions for RNA: ENST00000570659.5

SMG6-205, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 592 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-205ENST00000570659 SDR16C5Q8N3Y7 309 aa7.4□□□□□ -1.22
SMG6-205ENST00000570659 KDM1BQ8NB78 822 aa7.4□□□□□ -1.22
SMG6-205ENST00000570659 HJURPQ8NCD3 748 aaPredicted RBP7.4□□□□□ -1.22
SMG6-205ENST00000570659 DQX1Q8TE96 717 aaKnown RBP7.4□□□□□ -1.22
SMG6-205ENST00000570659 LIN37Q96GY3 246 aaPredicted RBP7.4□□□□□ -1.22
SMG6-205ENST00000570659 ZSCAN31Q96LW9 406 aaPredicted RBP7.4□□□□□ -1.22
SMG6-205ENST00000570659 PSMB7Q99436 277 aa7.4□□□□□ -1.22
SMG6-205ENST00000570659 PRMT1Q99873 361 aaKnown RBP7.4□□□□□ -1.22
SMG6-205ENST00000570659 BACH2Q9BYV9 841 aa7.4□□□□□ -1.22
SMG6-205ENST00000570659 MMRN2Q9H8L6 949 aa7.4□□□□□ -1.22
SMG6-205ENST00000570659 LRRC4CQ9HCJ2 640 aa7.4□□□□□ -1.22
SMG6-205ENST00000570659 ANLNQ9NQW6 1124 aa7.4□□□□□ -1.22
SMG6-205ENST00000570659 EIF2AK3Q9NZJ5 1116 aaKnown RBP7.4□□□□□ -1.22
SMG6-205ENST00000570659 SIRPGQ9P1W8 387 aa7.4□□□□□ -1.22
SMG6-205ENST00000570659 TSPAN16Q9UKR8 245 aa7.4□□□□□ -1.22
SMG6-205ENST00000570659 NAALADL1Q9UQQ1 740 aa7.4□□□□□ -1.22
SMG6-205ENST00000570659 LOXL2Q9Y4K0 774 aa7.4□□□□□ -1.22
SMG6-205ENST00000570659 SNX10Q9Y5X0 201 aa7.4□□□□□ -1.22
SMG6-205ENST00000570659 F8P00451 2351 aa7.4□□□□□ -1.23
SMG6-205ENST00000570659 HIVEP3Q5T1R4 2406 aa7.4□□□□□ -1.23
SMG6-205ENST00000570659 H3BQV1 296 aa7.39□□□□□ -1.23
SMG6-205ENST00000570659 YY2O15391 372 aa7.39□□□□□ -1.23
SMG6-205ENST00000570659 NKX2-8O15522 239 aa7.39□□□□□ -1.23
SMG6-205ENST00000570659 STX6O43752 255 aa7.39□□□□□ -1.23
SMG6-205ENST00000570659 ATP9BO43861 1147 aa7.39□□□□□ -1.23
SMG6-205ENST00000570659 LATS1O95835 1130 aa7.39□□□□□ -1.23
SMG6-205ENST00000570659 PAK4O96013 591 aaPredicted RBP7.39□□□□□ -1.23
SMG6-205ENST00000570659 RPLP0P05388 317 aaKnown RBP7.39□□□□□ -1.23
SMG6-205ENST00000570659 KRT7P08729 469 aa7.39□□□□□ -1.23
SMG6-205ENST00000570659 LIFP15018 202 aa7.39□□□□□ -1.23
SMG6-205ENST00000570659 JUNDP17535 347 aa7.39□□□□□ -1.23
SMG6-205ENST00000570659 HNRNPA2B1P22626 353 aaKnown RBP7.39□□□□□ -1.23
SMG6-205ENST00000570659 GNLYP22749 145 aa7.39□□□□□ -1.23
SMG6-205ENST00000570659 GKP32189 559 aa7.39□□□□□ -1.23
SMG6-205ENST00000570659 DCTP40126 519 aa7.39□□□□□ -1.23
SMG6-205ENST00000570659 CD97P48960 835 aa7.39□□□□□ -1.23
SMG6-205ENST00000570659 TBX4P57082 545 aa7.39□□□□□ -1.23
SMG6-205ENST00000570659 CDH18Q13634 790 aa7.39□□□□□ -1.23
SMG6-205ENST00000570659 MORC3Q14149 939 aa7.39□□□□□ -1.23
SMG6-205ENST00000570659 NR0B2Q15466 257 aa7.39□□□□□ -1.23
SMG6-205ENST00000570659 DLG2Q15700 870 aa7.39□□□□□ -1.23
SMG6-205ENST00000570659 KNOP1Q1ED39 458 aaKnown RBP7.39□□□□□ -1.23
SMG6-205ENST00000570659 LRRC73Q5JTD7 316 aa7.39□□□□□ -1.23
SMG6-205ENST00000570659 MANEAQ5SRI9 462 aa7.39□□□□□ -1.23
SMG6-205ENST00000570659 SHC4Q6S5L8 630 aa7.39□□□□□ -1.23
SMG6-205ENST00000570659 TADA2BQ86TJ2 420 aa7.39□□□□□ -1.23
SMG6-205ENST00000570659 TAC4Q86UU9 113 aa7.39□□□□□ -1.23
SMG6-205ENST00000570659 UBR7Q8N806 425 aa7.39□□□□□ -1.23
SMG6-205ENST00000570659 ANKRD52Q8NB46 1076 aa7.39□□□□□ -1.23
SMG6-205ENST00000570659 OR2A12Q8NGT7 310 aa7.39□□□□□ -1.23
SMG6-205ENST00000570659 DHX58Q96C10 678 aa7.39□□□□□ -1.23
SMG6-205ENST00000570659 CCDC97Q96F63 343 aaPredicted RBP7.39□□□□□ -1.23
SMG6-205ENST00000570659 SPAG5Q96R06 1193 aa7.39□□□□□ -1.23
SMG6-205ENST00000570659 CDK5RAP1Q96SZ6 601 aaKnown RBP7.39□□□□□ -1.23
SMG6-205ENST00000570659 NIF3L1Q9GZT8 377 aa7.39□□□□□ -1.23
SMG6-205ENST00000570659 TNKS2Q9H2K2 1166 aa7.39□□□□□ -1.23
SMG6-205ENST00000570659 SEMA6CQ9H3T2 930 aa7.39□□□□□ -1.23
SMG6-205ENST00000570659 CISHQ9NSE2 258 aa7.39□□□□□ -1.23
SMG6-205ENST00000570659 TFIP11Q9UBB9 837 aaKnown RBP7.39□□□□□ -1.23
SMG6-205ENST00000570659 CCDC39Q9UFE4 941 aa7.39□□□□□ -1.23
SMG6-205ENST00000570659 AKAP9Q99996 3911 aa7.39□□□□□ -1.23
SMG6-205ENST00000570659 RNF225M0QZC1 329 aaPredicted RBP7.38□□□□□ -1.23
SMG6-205ENST00000570659 O00370 1275 aa7.38□□□□□ -1.23
SMG6-205ENST00000570659 XPO1O14980 1071 aaKnown RBP7.38□□□□□ -1.23
SMG6-205ENST00000570659 MCF2LO15068 1137 aa7.38□□□□□ -1.23
SMG6-205ENST00000570659 SPTLC2O15270 562 aa7.38□□□□□ -1.23
SMG6-205ENST00000570659 SLC7A4O43246 635 aa7.38□□□□□ -1.23
SMG6-205ENST00000570659 TCEA3O75764 348 aa7.38□□□□□ -1.23
SMG6-205ENST00000570659 ENDOD1O94919 500 aa7.38□□□□□ -1.23
SMG6-205ENST00000570659 RPN1P04843 607 aaKnown RBP7.38□□□□□ -1.23
SMG6-205ENST00000570659 SLFN14P0C7P3 912 aa7.38□□□□□ -1.23
SMG6-205ENST00000570659 SRCP12931 536 aa7.38□□□□□ -1.23
SMG6-205ENST00000570659 PRF1P14222 555 aa7.38□□□□□ -1.23
SMG6-205ENST00000570659 TSHRP16473 764 aa7.38□□□□□ -1.23
SMG6-205ENST00000570659 TACR2P21452 398 aa7.38□□□□□ -1.23
SMG6-205ENST00000570659 RRM1P23921 792 aa7.38□□□□□ -1.23
SMG6-205ENST00000570659 IGFALSP35858 605 aa7.38□□□□□ -1.23
SMG6-205ENST00000570659 ABL2P42684 1182 aa7.38□□□□□ -1.23
SMG6-205ENST00000570659 MAPK10P53779 464 aa7.38□□□□□ -1.23
SMG6-205ENST00000570659 PFN3P60673 137 aa7.38□□□□□ -1.23
SMG6-205ENST00000570659 ZFP36L1Q07352 338 aaKnown RBP7.38□□□□□ -1.23
SMG6-205ENST00000570659 PDE1CQ14123 709 aaPredicted RBP7.38□□□□□ -1.23
SMG6-205ENST00000570659 SPIDRQ14159 915 aa7.38□□□□□ -1.23
SMG6-205ENST00000570659 NCAPHQ15003 741 aa7.38□□□□□ -1.23
SMG6-205ENST00000570659 TAF5Q15542 800 aa7.38□□□□□ -1.23
SMG6-205ENST00000570659 ARHGAP44Q17R89 818 aa7.38□□□□□ -1.23
SMG6-205ENST00000570659 PRR30Q53SZ7 412 aaPredicted RBP7.38□□□□□ -1.23
SMG6-205ENST00000570659 ZC3H12AQ5D1E8 599 aaKnown RBP7.38□□□□□ -1.23
SMG6-205ENST00000570659 PRRT3Q5FWE3 981 aa7.38□□□□□ -1.23
SMG6-205ENST00000570659 CNNM4Q6P4Q7 775 aa7.38□□□□□ -1.23
SMG6-205ENST00000570659 LINGO4Q6UY18 593 aa7.38□□□□□ -1.23
SMG6-205ENST00000570659 KYAT3Q6YP21 454 aaKnown RBP7.38□□□□□ -1.23
SMG6-205ENST00000570659 CCDC73Q6ZRK6 1079 aa7.38□□□□□ -1.23
SMG6-205ENST00000570659 CCAR2Q8N163 923 aaKnown RBP7.38□□□□□ -1.23
SMG6-205ENST00000570659 Q8N9G6 341 aaPredicted RBP7.38□□□□□ -1.23
SMG6-205ENST00000570659 PCDH19Q8TAB3 1148 aa7.38□□□□□ -1.23
SMG6-205ENST00000570659 GRIN3AQ8TCU5 1115 aa7.38□□□□□ -1.23
SMG6-205ENST00000570659 OR8D1Q8WZ84 308 aa7.38□□□□□ -1.23
SMG6-205ENST00000570659 KAT5Q92993 513 aa7.38□□□□□ -1.23
SMG6-205ENST00000570659 NKD1Q969G9 470 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms