RNA–Protein interactions for RNA: ENST00000570385.1

CTDNEP1-203, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 2

Gene CTDNEP1, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-203ENST00000570385 TLX3O43711 291 aaPredicted RBP8.82□□□□□ -1
CTDNEP1-203ENST00000570385 SRGAP2O75044 1071 aa8.82□□□□□ -1
CTDNEP1-203ENST00000570385 CLDN11O75508 207 aa8.82□□□□□ -1
CTDNEP1-203ENST00000570385 PCDH8O95206 1070 aa8.82□□□□□ -1
CTDNEP1-203ENST00000570385 CKMT2P17540 419 aa8.82□□□□□ -1
CTDNEP1-203ENST00000570385 CHRNA3P32297 505 aa8.82□□□□□ -1
CTDNEP1-203ENST00000570385 NOS2P35228 1153 aa8.82□□□□□ -1
CTDNEP1-203ENST00000570385 EIF2S3P41091 472 aaKnown RBP8.82□□□□□ -1
CTDNEP1-203ENST00000570385 ABCG1P45844 678 aa8.82□□□□□ -1
CTDNEP1-203ENST00000570385 RXRGP48443 463 aa8.82□□□□□ -1
CTDNEP1-203ENST00000570385 DNA2P51530 1060 aa8.82□□□□□ -1
CTDNEP1-203ENST00000570385 CDH4P55283 916 aa8.82□□□□□ -1
CTDNEP1-203ENST00000570385 DEUP1Q05D60 604 aa8.82□□□□□ -1
CTDNEP1-203ENST00000570385 RAPGEF1Q13905 1077 aa8.82□□□□□ -1
CTDNEP1-203ENST00000570385 TPD52L1Q16890 204 aaPredicted RBP8.82□□□□□ -1
CTDNEP1-203ENST00000570385 SETMARQ53H47 684 aaPredicted RBP8.82□□□□□ -1
CTDNEP1-203ENST00000570385 ARSIQ5FYB1 569 aa8.82□□□□□ -1
CTDNEP1-203ENST00000570385 PIP5KL1Q5T9C9 394 aa8.82□□□□□ -1
CTDNEP1-203ENST00000570385 SFMBT2Q5VUG0 894 aa8.82□□□□□ -1
CTDNEP1-203ENST00000570385 SEL1L3Q68CR1 1132 aa8.82□□□□□ -1
CTDNEP1-203ENST00000570385 FBXL19Q6PCT2 694 aa8.82□□□□□ -1
CTDNEP1-203ENST00000570385 SLC26A9Q7LBE3 791 aa8.82□□□□□ -1
CTDNEP1-203ENST00000570385 KANSL1Q7Z3B3 1105 aa8.82□□□□□ -1
CTDNEP1-203ENST00000570385 PHLDB2Q86SQ0 1253 aa8.82□□□□□ -1
CTDNEP1-203ENST00000570385 TRIM69Q86WT6 500 aa8.82□□□□□ -1
CTDNEP1-203ENST00000570385 SLC25A45Q8N413 288 aa8.82□□□□□ -1
CTDNEP1-203ENST00000570385 OXR1Q8N573 874 aa8.82□□□□□ -1
CTDNEP1-203ENST00000570385 OR2A12Q8NGT7 310 aa8.82□□□□□ -1
CTDNEP1-203ENST00000570385 FAM131CQ96AQ9 280 aa8.82□□□□□ -1
CTDNEP1-203ENST00000570385 NXPE2Q96DL1 559 aa8.82□□□□□ -1
CTDNEP1-203ENST00000570385 PPP1R9BQ96SB3 815 aa8.82□□□□□ -1
CTDNEP1-203ENST00000570385 TBCBQ99426 244 aa8.82□□□□□ -1
CTDNEP1-203ENST00000570385 NPY6RQ99463 290 aa8.82□□□□□ -1
CTDNEP1-203ENST00000570385 CALN1Q9BXU9 219 aa8.82□□□□□ -1
CTDNEP1-203ENST00000570385 ERVMER34-1Q9H9K5 563 aa8.82□□□□□ -1
CTDNEP1-203ENST00000570385 SCUBE2Q9NQ36 999 aa8.82□□□□□ -1
CTDNEP1-203ENST00000570385 UCKL1Q9NWZ5 548 aa8.82□□□□□ -1
CTDNEP1-203ENST00000570385 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP8.82□□□□□ -1
CTDNEP1-203ENST00000570385 KIAA1468Q9P260 1216 aa8.82□□□□□ -1
CTDNEP1-203ENST00000570385 VPS51Q9UID3 782 aa8.82□□□□□ -1
CTDNEP1-203ENST00000570385 DMTF1Q9Y222 760 aa8.82□□□□□ -1
CTDNEP1-203ENST00000570385 TBC1D30Q9Y2I9 924 aa8.82□□□□□ -1
CTDNEP1-203ENST00000570385 ACTL7AQ9Y615 435 aa8.82□□□□□ -1
CTDNEP1-203ENST00000570385 NBEAQ8NFP9 2946 aa8.82□□□□□ -1
CTDNEP1-203ENST00000570385 EIF4E1BA6NMX2 242 aaKnown RBP8.81□□□□□ -1
CTDNEP1-203ENST00000570385 PES1O00541 588 aaKnown RBP8.81□□□□□ -1
CTDNEP1-203ENST00000570385 ALOX15BO15296 676 aa8.81□□□□□ -1
CTDNEP1-203ENST00000570385 PRB1P04280 392 aa8.81□□□□□ -1
CTDNEP1-203ENST00000570385 C1SP09871 688 aa8.81□□□□□ -1
CTDNEP1-203ENST00000570385 THEGLP0DJG4 465 aa8.81□□□□□ -1
CTDNEP1-203ENST00000570385 PRKCSHP14314 528 aaPredicted RBP8.81□□□□□ -1
CTDNEP1-203ENST00000570385 CXCR3P49682 368 aa8.81□□□□□ -1
CTDNEP1-203ENST00000570385 KRT83P78385 493 aa8.81□□□□□ -1
CTDNEP1-203ENST00000570385 DAB2P98082 770 aa8.81□□□□□ -1
CTDNEP1-203ENST00000570385 INSM1Q01101 510 aaPredicted RBP8.81□□□□□ -1
CTDNEP1-203ENST00000570385 DRAP1Q14919 205 aaPredicted RBP8.81□□□□□ -1
CTDNEP1-203ENST00000570385 ZNF284Q2VY69 593 aa8.81□□□□□ -1
CTDNEP1-203ENST00000570385 FAM102AQ5T9C2 384 aaPredicted RBP8.81□□□□□ -1
CTDNEP1-203ENST00000570385 KDM7AQ6ZMT4 941 aa8.81□□□□□ -1
CTDNEP1-203ENST00000570385 TMC6Q7Z403 805 aa8.81□□□□□ -1
CTDNEP1-203ENST00000570385 IQCHQ86VS3 1027 aa8.81□□□□□ -1
CTDNEP1-203ENST00000570385 HORMAD1Q86X24 394 aa8.81□□□□□ -1
CTDNEP1-203ENST00000570385 ZNF683Q8IZ20 524 aa8.81□□□□□ -1
CTDNEP1-203ENST00000570385 TMEM145Q8NBT3 493 aa8.81□□□□□ -1
CTDNEP1-203ENST00000570385 OR13H1Q8NG92 308 aa8.81□□□□□ -1
CTDNEP1-203ENST00000570385 FAM81BQ96LP2 452 aa8.81□□□□□ -1
CTDNEP1-203ENST00000570385 C2orf49Q9BVC5 232 aaPredicted RBP8.81□□□□□ -1
CTDNEP1-203ENST00000570385 OSBPL2Q9H1P3 480 aa8.81□□□□□ -1
CTDNEP1-203ENST00000570385 KDM4CQ9H3R0 1056 aa8.81□□□□□ -1
CTDNEP1-203ENST00000570385 PREBQ9HCU5 417 aa8.81□□□□□ -1
CTDNEP1-203ENST00000570385 DYRK4Q9NR20 520 aa8.81□□□□□ -1
CTDNEP1-203ENST00000570385 ARHGEF38Q9NXL2 777 aa8.81□□□□□ -1
CTDNEP1-203ENST00000570385 TPX2Q9ULW0 747 aaKnown RBP8.81□□□□□ -1
CTDNEP1-203ENST00000570385 CLCA2Q9UQC9 943 aa8.81□□□□□ -1
CTDNEP1-203ENST00000570385 HS3ST2Q9Y278 367 aa8.81□□□□□ -1
CTDNEP1-203ENST00000570385 FARP1Q9Y4F1 1045 aaPredicted RBP8.81□□□□□ -1
CTDNEP1-203ENST00000570385 RAI2Q9Y5P3 530 aa8.81□□□□□ -1
CTDNEP1-203ENST00000570385 COL5A1P20908 1838 aaPredicted RBP8.81□□□□□ -1
CTDNEP1-203ENST00000570385 DRGXA6NNA5 263 aa8.8□□□□□ -1
CTDNEP1-203ENST00000570385 E9PAM4 449 aa8.8□□□□□ -1
CTDNEP1-203ENST00000570385 BRINP1O60477 761 aa8.8□□□□□ -1
CTDNEP1-203ENST00000570385 MAGEC1O60732 1142 aa8.8□□□□□ -1
CTDNEP1-203ENST00000570385 LEFTY1O75610 366 aa8.8□□□□□ -1
CTDNEP1-203ENST00000570385 NEBLO76041 1014 aa8.8□□□□□ -1
CTDNEP1-203ENST00000570385 ZIC2O95409 532 aaPredicted RBP8.8□□□□□ -1
CTDNEP1-203ENST00000570385 CYP11B1P15538 503 aa8.8□□□□□ -1
CTDNEP1-203ENST00000570385 DGKAP23743 735 aa8.8□□□□□ -1
CTDNEP1-203ENST00000570385 OR1E1P30953 314 aa8.8□□□□□ -1
CTDNEP1-203ENST00000570385 AKT2P31751 481 aa8.8□□□□□ -1
CTDNEP1-203ENST00000570385 GKP32189 559 aa8.8□□□□□ -1
CTDNEP1-203ENST00000570385 FLT3P36888 993 aa8.8□□□□□ -1
CTDNEP1-203ENST00000570385 RECQLP46063 649 aaPredicted RBP8.8□□□□□ -1
CTDNEP1-203ENST00000570385 VASPP50552 380 aaPredicted RBP8.8□□□□□ -1
CTDNEP1-203ENST00000570385 SNX16P57768 344 aa8.8□□□□□ -1
CTDNEP1-203ENST00000570385 ATP11AP98196 1134 aa8.8□□□□□ -1
CTDNEP1-203ENST00000570385 CCDC173Q0VFZ6 552 aa8.8□□□□□ -1
CTDNEP1-203ENST00000570385 KCNMA1Q12791 1236 aa8.8□□□□□ -1
CTDNEP1-203ENST00000570385 OVGP1Q12889 678 aa8.8□□□□□ -1
CTDNEP1-203ENST00000570385 MAN2A1Q16706 1144 aa8.8□□□□□ -1
CTDNEP1-203ENST00000570385 PROX2Q3B8N5 592 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms