RNA–Protein interactions for RNA: ENST00000569882.1

CNOT1-219, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 831 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-219ENST00000569882 PKN3Q6P5Z2 889 aa4.98□□□□□ -1.61
CNOT1-219ENST00000569882 DCUN1D2Q6PH85 259 aa4.98□□□□□ -1.61
CNOT1-219ENST00000569882 SLC36A4Q6YBV0 504 aa4.98□□□□□ -1.61
CNOT1-219ENST00000569882 MMS22LQ6ZRQ5 1243 aa4.98□□□□□ -1.61
CNOT1-219ENST00000569882 CHST9Q7L1S5 443 aa4.98□□□□□ -1.61
CNOT1-219ENST00000569882 ARMCX6Q7L4S7 300 aa4.98□□□□□ -1.61
CNOT1-219ENST00000569882 LPCAT2Q7L5N7 544 aa4.98□□□□□ -1.61
CNOT1-219ENST00000569882 PHLDB2Q86SQ0 1253 aa4.98□□□□□ -1.61
CNOT1-219ENST00000569882 TMEM110Q86TL2 294 aa4.98□□□□□ -1.61
CNOT1-219ENST00000569882 LUZP1Q86V48 1076 aa4.98□□□□□ -1.61
CNOT1-219ENST00000569882 FAM20CQ8IXL6 584 aa4.98□□□□□ -1.61
CNOT1-219ENST00000569882 MAML2Q8IZL2 1156 aaPredicted RBP4.98□□□□□ -1.61
CNOT1-219ENST00000569882 IL17RCQ8NAC3 791 aa4.98□□□□□ -1.61
CNOT1-219ENST00000569882 ZBTB44Q8NCP5 570 aa4.98□□□□□ -1.61
CNOT1-219ENST00000569882 MDGA1Q8NFP4 955 aa4.98□□□□□ -1.61
CNOT1-219ENST00000569882 SNX19Q92543 992 aa4.98□□□□□ -1.61
CNOT1-219ENST00000569882 PRCCQ92733 491 aaPredicted RBP4.98□□□□□ -1.61
CNOT1-219ENST00000569882 WBP2Q969T9 261 aa4.98□□□□□ -1.61
CNOT1-219ENST00000569882 BPIFA3Q9BQP9 254 aa4.98□□□□□ -1.61
CNOT1-219ENST00000569882 ZSWIM1Q9BR11 485 aa4.98□□□□□ -1.61
CNOT1-219ENST00000569882 C11orf70Q9BRQ4 267 aa4.98□□□□□ -1.61
CNOT1-219ENST00000569882 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP4.98□□□□□ -1.61
CNOT1-219ENST00000569882 NUP58Q9BVL2 599 aa4.98□□□□□ -1.61
CNOT1-219ENST00000569882 EPC1Q9H2F5 836 aa4.98□□□□□ -1.61
CNOT1-219ENST00000569882 TSPY26PQ9H489 355 aa4.98□□□□□ -1.61
CNOT1-219ENST00000569882 DEF6Q9H4E7 631 aa4.98□□□□□ -1.61
CNOT1-219ENST00000569882 SIX2Q9NPC8 291 aa4.98□□□□□ -1.61
CNOT1-219ENST00000569882 METTL5Q9NRN9 209 aaKnown RBP4.98□□□□□ -1.61
CNOT1-219ENST00000569882 TMEM51Q9NW97 253 aa4.98□□□□□ -1.61
CNOT1-219ENST00000569882 CACNA2D2Q9NY47 1150 aa4.98□□□□□ -1.61
CNOT1-219ENST00000569882 ADAM22Q9P0K1 906 aa4.98□□□□□ -1.61
CNOT1-219ENST00000569882 SLC25A13Q9UJS0 675 aa4.98□□□□□ -1.61
CNOT1-219ENST00000569882 GGA2Q9UJY4 613 aa4.98□□□□□ -1.61
CNOT1-219ENST00000569882 RAD54BQ9Y620 910 aa4.98□□□□□ -1.61
CNOT1-219ENST00000569882 STON1Q9Y6Q2 735 aa4.98□□□□□ -1.61
CNOT1-219ENST00000569882 CEP192Q8TEP8 1941 aa4.97□□□□□ -1.61
CNOT1-219ENST00000569882 PIEZO1Q92508 2521 aa4.97□□□□□ -1.61
CNOT1-219ENST00000569882 RIF1Q5UIP0 2472 aaKnown RBP4.97□□□□□ -1.61
CNOT1-219ENST00000569882 GOLGA6L7A0A1B0GV03 622 aa4.97□□□□□ -1.61
CNOT1-219ENST00000569882 A0A1B0GVM2 712 aa4.97□□□□□ -1.61
CNOT1-219ENST00000569882 TCAF2A6NFQ2 919 aa4.97□□□□□ -1.61
CNOT1-219ENST00000569882 KCNU1A8MYU2 1149 aa4.97□□□□□ -1.61
CNOT1-219ENST00000569882 K7ESF4 209 aa4.97□□□□□ -1.61
CNOT1-219ENST00000569882 SGK1O00141 431 aa4.97□□□□□ -1.61
CNOT1-219ENST00000569882 GFRA2O00451 464 aa4.97□□□□□ -1.61
CNOT1-219ENST00000569882 TRIM24O15164 1050 aa4.97□□□□□ -1.61
CNOT1-219ENST00000569882 ICMTO60725 284 aa4.97□□□□□ -1.61
CNOT1-219ENST00000569882 SRGAP2O75044 1071 aa4.97□□□□□ -1.61
CNOT1-219ENST00000569882 LUC7L3O95232 432 aaKnown RBP4.97□□□□□ -1.61
CNOT1-219ENST00000569882 ADCY5O95622 1261 aa4.97□□□□□ -1.61
CNOT1-219ENST00000569882 PENKP01210 267 aaPredicted RBP4.97□□□□□ -1.61
CNOT1-219ENST00000569882 DNTTP04053 509 aa4.97□□□□□ -1.61
CNOT1-219ENST00000569882 ASLP04424 464 aa4.97□□□□□ -1.61
CNOT1-219ENST00000569882 RHOCP08134 193 aa4.97□□□□□ -1.61
CNOT1-219ENST00000569882 KRT3P12035 628 aa4.97□□□□□ -1.61
CNOT1-219ENST00000569882 ATP1A3P13637 1013 aa4.97□□□□□ -1.61
CNOT1-219ENST00000569882 GNSP15586 552 aa4.97□□□□□ -1.61
CNOT1-219ENST00000569882 TACR2P21452 398 aa4.97□□□□□ -1.61
CNOT1-219ENST00000569882 HOXD9P28356 352 aaPredicted RBP4.97□□□□□ -1.61
CNOT1-219ENST00000569882 HOXA6P31267 233 aa4.97□□□□□ -1.61
CNOT1-219ENST00000569882 RDXP35241 583 aaKnown RBP4.97□□□□□ -1.61
CNOT1-219ENST00000569882 DPP6P42658 865 aa4.97□□□□□ -1.61
CNOT1-219ENST00000569882 SSR1P43307 286 aaKnown RBP4.97□□□□□ -1.61
CNOT1-219ENST00000569882 RECQLP46063 649 aaPredicted RBP4.97□□□□□ -1.61
CNOT1-219ENST00000569882 CD97P48960 835 aa4.97□□□□□ -1.61
CNOT1-219ENST00000569882 NUMBP49757 651 aa4.97□□□□□ -1.61
CNOT1-219ENST00000569882 RPS24P62847 133 aaKnown RBP4.97□□□□□ -1.61
CNOT1-219ENST00000569882 KRT83P78385 493 aa4.97□□□□□ -1.61
CNOT1-219ENST00000569882 KLHL30Q0D2K2 578 aa4.97□□□□□ -1.61
CNOT1-219ENST00000569882 ZNF234Q14588 700 aa4.97□□□□□ -1.61
CNOT1-219ENST00000569882 CCDC6Q16204 474 aa4.97□□□□□ -1.61
CNOT1-219ENST00000569882 GEN1Q17RS7 908 aa4.97□□□□□ -1.61
CNOT1-219ENST00000569882 ZSCAN23Q3MJ62 389 aa4.97□□□□□ -1.61
CNOT1-219ENST00000569882 PTPN20Q4JDL3 420 aa4.97□□□□□ -1.61
CNOT1-219ENST00000569882 C2CD6Q53TS8 623 aa4.97□□□□□ -1.61
CNOT1-219ENST00000569882 BRMS1LQ5PSV4 323 aa4.97□□□□□ -1.61
CNOT1-219ENST00000569882 MPP7Q5T2T1 576 aa4.97□□□□□ -1.61
CNOT1-219ENST00000569882 ZFYVE27Q5T4F4 411 aa4.97□□□□□ -1.61
CNOT1-219ENST00000569882 FYB2Q5VWT5 728 aa4.97□□□□□ -1.61
CNOT1-219ENST00000569882 SYPL2Q5VXT5 272 aa4.97□□□□□ -1.61
CNOT1-219ENST00000569882 LYSMD4Q5XG99 296 aa4.97□□□□□ -1.61
CNOT1-219ENST00000569882 MBLAC2Q68D91 279 aa4.97□□□□□ -1.61
CNOT1-219ENST00000569882 RWDD4Q6NW29 188 aaKnown RBP4.97□□□□□ -1.61
CNOT1-219ENST00000569882 SCYL2Q6P3W7 929 aa4.97□□□□□ -1.61
CNOT1-219ENST00000569882 OLFML1Q6UWY5 402 aa4.97□□□□□ -1.61
CNOT1-219ENST00000569882 BEND5Q7L4P6 421 aa4.97□□□□□ -1.61
CNOT1-219ENST00000569882 SLC26A9Q7LBE3 791 aa4.97□□□□□ -1.61
CNOT1-219ENST00000569882 DSG4Q86SJ6 1040 aa4.97□□□□□ -1.61
CNOT1-219ENST00000569882 NOP9Q86U38 636 aaKnown RBP4.97□□□□□ -1.61
CNOT1-219ENST00000569882 FAM124AQ86V42 546 aa4.97□□□□□ -1.61
CNOT1-219ENST00000569882 KBTBD6Q86V97 674 aa4.97□□□□□ -1.61
CNOT1-219ENST00000569882 ZDHHC13Q8IUH4 622 aa4.97□□□□□ -1.61
CNOT1-219ENST00000569882 SFTPA1Q8IWL2 248 aa4.97□□□□□ -1.61
CNOT1-219ENST00000569882 CFAP52Q8N1V2 620 aa4.97□□□□□ -1.61
CNOT1-219ENST00000569882 DCLK2Q8N568 766 aa4.97□□□□□ -1.61
CNOT1-219ENST00000569882 SLC30A5Q8TAD4 765 aa4.97□□□□□ -1.61
CNOT1-219ENST00000569882 CYB5D2Q8WUJ1 264 aa4.97□□□□□ -1.61
CNOT1-219ENST00000569882 SLC20A1Q8WUM9 679 aa4.97□□□□□ -1.61
CNOT1-219ENST00000569882 CPLX3Q8WVH0 158 aa4.97□□□□□ -1.61
CNOT1-219ENST00000569882 RLN3Q8WXF3 142 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms