RNA–Protein interactions for RNA: ENST00000569429.5

HERPUD1-217, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 4

Gene HERPUD1, Length 562 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-217ENST00000569429 FAM46CQ5VWP2 391 aa6.82□□□□□ -1.32
HERPUD1-217ENST00000569429 CPLX2Q6PUV4 134 aaKnown RBP6.82□□□□□ -1.32
HERPUD1-217ENST00000569429 LVRNQ6Q4G3 990 aa6.82□□□□□ -1.32
HERPUD1-217ENST00000569429 TGIF2LYQ8IUE0 185 aa6.82□□□□□ -1.32
HERPUD1-217ENST00000569429 BRSK2Q8IWQ3 736 aa6.82□□□□□ -1.32
HERPUD1-217ENST00000569429 UNC5BQ8IZJ1 945 aa6.82□□□□□ -1.32
HERPUD1-217ENST00000569429 RBFAQ8N0V3 343 aa6.82□□□□□ -1.32
HERPUD1-217ENST00000569429 SYT2Q8N9I0 419 aaPredicted RBP6.82□□□□□ -1.32
HERPUD1-217ENST00000569429 KYQ8NBH2 561 aa6.82□□□□□ -1.32
HERPUD1-217ENST00000569429 CCDC112Q8NEF3 446 aa6.82□□□□□ -1.32
HERPUD1-217ENST00000569429 WFDC5Q8TCV5 224 aa6.82□□□□□ -1.32
HERPUD1-217ENST00000569429 SNRNP40Q96DI7 357 aaKnown RBP6.82□□□□□ -1.32
HERPUD1-217ENST00000569429 C19orf60Q96EN9 201 aa6.82□□□□□ -1.32
HERPUD1-217ENST00000569429 TMA16Q96EY4 203 aaKnown RBP6.82□□□□□ -1.32
HERPUD1-217ENST00000569429 HPDLQ96IR7 371 aa6.82□□□□□ -1.32
HERPUD1-217ENST00000569429 SPAG5Q96R06 1193 aa6.82□□□□□ -1.32
HERPUD1-217ENST00000569429 CDK5RAP1Q96SZ6 601 aaKnown RBP6.82□□□□□ -1.32
HERPUD1-217ENST00000569429 CGRRF1Q99675 332 aa6.82□□□□□ -1.32
HERPUD1-217ENST00000569429 ESYT1Q9BSJ8 1104 aa6.82□□□□□ -1.32
HERPUD1-217ENST00000569429 LRRC61Q9BV99 259 aa6.82□□□□□ -1.32
HERPUD1-217ENST00000569429 CLPBQ9H078 707 aa6.82□□□□□ -1.32
HERPUD1-217ENST00000569429 CSNK1G1Q9HCP0 422 aa6.82□□□□□ -1.32
HERPUD1-217ENST00000569429 MRPL40Q9NQ50 206 aaKnown RBP6.82□□□□□ -1.32
HERPUD1-217ENST00000569429 ANO2Q9NQ90 1003 aa6.82□□□□□ -1.32
HERPUD1-217ENST00000569429 CLIC5Q9NZA1 410 aa6.82□□□□□ -1.32
HERPUD1-217ENST00000569429 KCND2Q9NZV8 630 aa6.82□□□□□ -1.32
HERPUD1-217ENST00000569429 APOBEC3BQ9UH17 382 aaKnown RBP6.82□□□□□ -1.32
HERPUD1-217ENST00000569429 STOML2Q9UJZ1 356 aa6.82□□□□□ -1.32
HERPUD1-217ENST00000569429 PCDHGB7Q9Y5F8 929 aa6.82□□□□□ -1.32
HERPUD1-217ENST00000569429 HIVEP2P31629 2446 aa6.81□□□□□ -1.32
HERPUD1-217ENST00000569429 A0A1W2PQH9 124 aa6.81□□□□□ -1.32
HERPUD1-217ENST00000569429 WIPF1O43516 503 aa6.81□□□□□ -1.32
HERPUD1-217ENST00000569429 KRT86O43790 486 aa6.81□□□□□ -1.32
HERPUD1-217ENST00000569429 AP1G2O75843 785 aa6.81□□□□□ -1.32
HERPUD1-217ENST00000569429 BEST1O76090 585 aa6.81□□□□□ -1.32
HERPUD1-217ENST00000569429 SNRPB2P08579 225 aaKnown RBP6.81□□□□□ -1.32
HERPUD1-217ENST00000569429 FURINP09958 794 aa6.81□□□□□ -1.32
HERPUD1-217ENST00000569429 RALAP11233 206 aa6.81□□□□□ -1.32
HERPUD1-217ENST00000569429 FOSL1P15407 271 aa6.81□□□□□ -1.32
HERPUD1-217ENST00000569429 ABCD1P33897 745 aa6.81□□□□□ -1.32
HERPUD1-217ENST00000569429 ITGA1P56199 1179 aa6.81□□□□□ -1.32
HERPUD1-217ENST00000569429 RAB15P59190 212 aa6.81□□□□□ -1.32
HERPUD1-217ENST00000569429 GTF2BQ00403 316 aa6.81□□□□□ -1.32
HERPUD1-217ENST00000569429 SEMA5AQ13591 1074 aa6.81□□□□□ -1.32
HERPUD1-217ENST00000569429 POSTNQ15063 836 aa6.81□□□□□ -1.32
HERPUD1-217ENST00000569429 SKOR2Q2VWA4 1001 aaPredicted RBP6.81□□□□□ -1.32
HERPUD1-217ENST00000569429 KMT5BQ4FZB7 885 aa6.81□□□□□ -1.32
HERPUD1-217ENST00000569429 RD3Q7Z3Z2 195 aa6.81□□□□□ -1.32
HERPUD1-217ENST00000569429 SPRED1Q7Z699 444 aa6.81□□□□□ -1.32
HERPUD1-217ENST00000569429 HPS6Q86YV9 775 aa6.81□□□□□ -1.32
HERPUD1-217ENST00000569429 PHACTR4Q8IZ21 702 aa6.81□□□□□ -1.32
HERPUD1-217ENST00000569429 SCG3Q8WXD2 468 aaKnown RBP6.81□□□□□ -1.32
HERPUD1-217ENST00000569429 ART4Q93070 314 aa6.81□□□□□ -1.32
HERPUD1-217ENST00000569429 PNPLA2Q96AD5 504 aa6.81□□□□□ -1.32
HERPUD1-217ENST00000569429 CENPTQ96BT3 561 aa6.81□□□□□ -1.32
HERPUD1-217ENST00000569429 C14orf79Q96F83 325 aa6.81□□□□□ -1.32
HERPUD1-217ENST00000569429 TEFMQ96QE5 360 aaKnown RBP6.81□□□□□ -1.32
HERPUD1-217ENST00000569429 SMOQ99835 787 aa6.81□□□□□ -1.32
HERPUD1-217ENST00000569429 SLC25A23Q9BV35 468 aa6.81□□□□□ -1.32
HERPUD1-217ENST00000569429 IRX2Q9BZI1 471 aaPredicted RBP6.81□□□□□ -1.32
HERPUD1-217ENST00000569429 MTMR12Q9C0I1 747 aa6.81□□□□□ -1.32
HERPUD1-217ENST00000569429 TRIT1Q9H3H1 467 aaKnown RBP6.81□□□□□ -1.32
HERPUD1-217ENST00000569429 TCEAL2Q9H3H9 227 aaPredicted RBP6.81□□□□□ -1.32
HERPUD1-217ENST00000569429 RWDD1Q9H446 243 aaPredicted RBP6.81□□□□□ -1.32
HERPUD1-217ENST00000569429 ASF1BQ9NVP2 202 aa6.81□□□□□ -1.32
HERPUD1-217ENST00000569429 IPO11Q9UI26 975 aaKnown RBP6.81□□□□□ -1.32
HERPUD1-217ENST00000569429 SLCO3A1Q9UIG8 710 aa6.81□□□□□ -1.32
HERPUD1-217ENST00000569429 RASAL2Q9UJF2 1139 aa6.81□□□□□ -1.32
HERPUD1-217ENST00000569429 INTS6Q9UL03 887 aaKnown RBP6.81□□□□□ -1.32
HERPUD1-217ENST00000569429 SARDHQ9UL12 918 aa6.81□□□□□ -1.32
HERPUD1-217ENST00000569429 ERVW-1Q9UQF0 538 aa6.81□□□□□ -1.32
HERPUD1-217ENST00000569429 R3HCC1Q9Y3T6 440 aaKnown RBP6.81□□□□□ -1.32
HERPUD1-217ENST00000569429 SONP18583 2426 aaKnown RBP6.81□□□□□ -1.32
HERPUD1-217ENST00000569429 ZSCAN5CA6NGD5 496 aaPredicted RBP6.8□□□□□ -1.32
HERPUD1-217ENST00000569429 A8MXQ7 604 aa6.8□□□□□ -1.32
HERPUD1-217ENST00000569429 B4E171 279 aa6.8□□□□□ -1.32
HERPUD1-217ENST00000569429 TISP43B9A030 160 aa6.8□□□□□ -1.32
HERPUD1-217ENST00000569429 K7ENM7 598 aa6.8□□□□□ -1.32
HERPUD1-217ENST00000569429 INPP4BO15327 924 aa6.8□□□□□ -1.32
HERPUD1-217ENST00000569429 DPM1O60762 260 aa6.8□□□□□ -1.32
HERPUD1-217ENST00000569429 DNAJB5O75953 348 aa6.8□□□□□ -1.32
HERPUD1-217ENST00000569429 MAP3K6O95382 1288 aa6.8□□□□□ -1.32
HERPUD1-217ENST00000569429 CPNE6O95741 557 aa6.8□□□□□ -1.32
HERPUD1-217ENST00000569429 RECKO95980 971 aa6.8□□□□□ -1.32
HERPUD1-217ENST00000569429 SLFN14P0C7P3 912 aa6.8□□□□□ -1.32
HERPUD1-217ENST00000569429 PLA2G4BP0C869 781 aa6.8□□□□□ -1.32
HERPUD1-217ENST00000569429 GLB1P16278 677 aa6.8□□□□□ -1.32
HERPUD1-217ENST00000569429 TSHRP16473 764 aa6.8□□□□□ -1.32
HERPUD1-217ENST00000569429 FECHP22830 423 aa6.8□□□□□ -1.32
HERPUD1-217ENST00000569429 MCM7P33993 719 aa6.8□□□□□ -1.32
HERPUD1-217ENST00000569429 TSPAN7P41732 249 aa6.8□□□□□ -1.32
HERPUD1-217ENST00000569429 EFEMP1Q12805 493 aa6.8□□□□□ -1.32
HERPUD1-217ENST00000569429 TRA2AQ13595 282 aaKnown RBP eCLIP6.8□□□□□ -1.32
HERPUD1-217ENST00000569429 PDE1CQ14123 709 aaPredicted RBP6.8□□□□□ -1.32
HERPUD1-217ENST00000569429 TRIP4Q15650 581 aaPredicted RBP6.8□□□□□ -1.32
HERPUD1-217ENST00000569429 CLPPQ16740 277 aaPredicted RBP6.8□□□□□ -1.32
HERPUD1-217ENST00000569429 ZNF630Q2M218 657 aaPredicted RBP6.8□□□□□ -1.32
HERPUD1-217ENST00000569429 TMEM259Q4ZIN3 620 aa6.8□□□□□ -1.32
HERPUD1-217ENST00000569429 MIIPQ5JXC2 388 aa6.8□□□□□ -1.32
HERPUD1-217ENST00000569429 TPRG1LQ5T0D9 272 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms