RNA–Protein interactions for RNA: ENST00000568676.5

HERPUD1-215, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 571 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-215ENST00000568676 CALCAP01258 141 aa16.15■□□□□ 0.18
HERPUD1-215ENST00000568676 GNA15P30679 374 aa16.15■□□□□ 0.18
HERPUD1-215ENST00000568676 MARSP56192 900 aaKnown RBP16.15■□□□□ 0.18
HERPUD1-215ENST00000568676 TAS2R38P59533 333 aa16.15■□□□□ 0.18
HERPUD1-215ENST00000568676 HNRNPKP61978 463 aaKnown RBP eCLIP16.15■□□□□ 0.188e-13■■■□□ 16.8
HERPUD1-215ENST00000568676 TAF1BQ53T94 588 aaPredicted RBP16.15■□□□□ 0.18
HERPUD1-215ENST00000568676 IGF2-ASQ6U949 168 aa16.15■□□□□ 0.18
HERPUD1-215ENST00000568676 ABI3BPQ7Z7G0 1075 aa16.15■□□□□ 0.18
HERPUD1-215ENST00000568676 CIR1Q86X95 450 aaPredicted RBP16.15■□□□□ 0.18
HERPUD1-215ENST00000568676 ELOA2Q8IYF1 753 aaPredicted RBP16.15■□□□□ 0.18
HERPUD1-215ENST00000568676 PPP1R16AQ96I34 528 aa16.15■□□□□ 0.18
HERPUD1-215ENST00000568676 NOX5Q96PH1 765 aa16.15■□□□□ 0.18
HERPUD1-215ENST00000568676 ABCG4Q9H172 646 aa16.15■□□□□ 0.18
HERPUD1-215ENST00000568676 POLR1BQ9H9Y6 1135 aa16.15■□□□□ 0.18
HERPUD1-215ENST00000568676 THSD1Q9NS62 852 aa16.15■□□□□ 0.18
HERPUD1-215ENST00000568676 RRN3Q9NYV6 651 aa16.15■□□□□ 0.18
HERPUD1-215ENST00000568676 HS3ST3A1Q9Y663 406 aa16.15■□□□□ 0.18
HERPUD1-215ENST00000568676 KALRNO60229 2985 aa16.14■□□□□ 0.17
HERPUD1-215ENST00000568676 A6NNZ2 444 aa16.14■□□□□ 0.17
HERPUD1-215ENST00000568676 KPNA3O00505 521 aaPredicted RBP16.14■□□□□ 0.17
HERPUD1-215ENST00000568676 SCAMP1O15126 338 aa16.14■□□□□ 0.17
HERPUD1-215ENST00000568676 SLC31A1O15431 190 aa16.14■□□□□ 0.17
HERPUD1-215ENST00000568676 THAP12O43422 761 aa16.14■□□□□ 0.17
HERPUD1-215ENST00000568676 AFPP02771 609 aaKnown RBP16.14■□□□□ 0.17
HERPUD1-215ENST00000568676 SRCP12931 536 aa16.14■□□□□ 0.17
HERPUD1-215ENST00000568676 CHRNA3P32297 505 aa16.14■□□□□ 0.17
HERPUD1-215ENST00000568676 GABREP78334 506 aa16.14■□□□□ 0.17
HERPUD1-215ENST00000568676 ZNF284Q2VY69 593 aa16.14■□□□□ 0.17
HERPUD1-215ENST00000568676 TTI2Q6NXR4 508 aa16.14■□□□□ 0.17
HERPUD1-215ENST00000568676 SETD3Q86TU7 594 aaPredicted RBP16.14■□□□□ 0.17
HERPUD1-215ENST00000568676 TRIM59Q8IWR1 403 aa16.14■□□□□ 0.17
HERPUD1-215ENST00000568676 DEFB106AQ8N104 65 aa16.14■□□□□ 0.17
HERPUD1-215ENST00000568676 ATP11CQ8NB49 1132 aa16.14■□□□□ 0.17
HERPUD1-215ENST00000568676 SNRNP27Q8WVK2 155 aaKnown RBP16.14■□□□□ 0.17
HERPUD1-215ENST00000568676 CCDC97Q96F63 343 aaPredicted RBP16.14■□□□□ 0.17
HERPUD1-215ENST00000568676 APOLD1Q96LR9 279 aa16.14■□□□□ 0.17
HERPUD1-215ENST00000568676 CALN1Q9BXU9 219 aa16.14■□□□□ 0.17
HERPUD1-215ENST00000568676 HDAC8Q9BY41 377 aa16.14■□□□□ 0.17
HERPUD1-215ENST00000568676 MUC3BQ9H195 1237 aa16.14■□□□□ 0.17
HERPUD1-215ENST00000568676 UCKL1Q9NWZ5 548 aa16.14■□□□□ 0.17
HERPUD1-215ENST00000568676 VANGL2Q9ULK5 521 aa16.14■□□□□ 0.17
HERPUD1-215ENST00000568676 PAXBP1Q9Y5B6 917 aa16.14■□□□□ 0.17
HERPUD1-215ENST00000568676 PCDHB1Q9Y5F3 818 aa16.14■□□□□ 0.17
HERPUD1-215ENST00000568676 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.14■□□□□ 0.17
HERPUD1-215ENST00000568676 ASH1LQ9NR48 2969 aaKnown RBP16.14■□□□□ 0.17
HERPUD1-215ENST00000568676 SETXQ7Z333 2677 aaKnown RBP16.13■□□□□ 0.17
HERPUD1-215ENST00000568676 H3BM21 787 aa16.13■□□□□ 0.17
HERPUD1-215ENST00000568676 J3QKU1 62 aa16.13■□□□□ 0.17
HERPUD1-215ENST00000568676 FFAR2O15552 330 aa16.13■□□□□ 0.17
HERPUD1-215ENST00000568676 USP12O75317 370 aa16.13■□□□□ 0.17
HERPUD1-215ENST00000568676 ZIC2O95409 532 aaPredicted RBP16.13■□□□□ 0.17
HERPUD1-215ENST00000568676 GIMD1P0DJR0 217 aa16.13■□□□□ 0.17
HERPUD1-215ENST00000568676 PRLRP16471 622 aa16.13■□□□□ 0.17
HERPUD1-215ENST00000568676 PITX1P78337 314 aaPredicted RBP16.13■□□□□ 0.17
HERPUD1-215ENST00000568676 CENPCQ03188 943 aa16.13■□□□□ 0.17
HERPUD1-215ENST00000568676 POM121L1PQ3SYA9 428 aa16.13■□□□□ 0.17
HERPUD1-215ENST00000568676 ZCCHC8Q6NZY4 707 aaKnown RBP16.13■□□□□ 0.17
HERPUD1-215ENST00000568676 ERN2Q76MJ5 926 aaKnown RBP16.13■□□□□ 0.17
HERPUD1-215ENST00000568676 TMC6Q7Z403 805 aa16.13■□□□□ 0.17
HERPUD1-215ENST00000568676 DCAF4L2Q8NA75 395 aa16.13■□□□□ 0.17
HERPUD1-215ENST00000568676 OR13H1Q8NG92 308 aa16.13■□□□□ 0.17
HERPUD1-215ENST00000568676 OR2A12Q8NGT7 310 aa16.13■□□□□ 0.17
HERPUD1-215ENST00000568676 TPCN2Q8NHX9 752 aa16.13■□□□□ 0.17
HERPUD1-215ENST00000568676 KCNE4Q8WWG9 221 aa16.13■□□□□ 0.17
HERPUD1-215ENST00000568676 PPP1R13BQ96KQ4 1090 aa16.13■□□□□ 0.17
HERPUD1-215ENST00000568676 INTS2Q9H0H0 1204 aaKnown RBP16.13■□□□□ 0.17
HERPUD1-215ENST00000568676 UBE2TQ9NPD8 197 aaPredicted RBP16.13■□□□□ 0.17
HERPUD1-215ENST00000568676 CA5BQ9Y2D0 317 aa16.13■□□□□ 0.17
HERPUD1-215ENST00000568676 HS3ST4Q9Y661 456 aa16.13■□□□□ 0.17
HERPUD1-215ENST00000568676 CSNK1G3Q9Y6M4 447 aa16.13■□□□□ 0.17
HERPUD1-215ENST00000568676 FLNBO75369 2602 aaKnown RBP16.12■□□□□ 0.17
HERPUD1-215ENST00000568676 BNIP3LO60238 219 aa16.12■□□□□ 0.17
HERPUD1-215ENST00000568676 CSO75390 466 aaKnown RBP16.12■□□□□ 0.17
HERPUD1-215ENST00000568676 PCDH8O95206 1070 aa16.12■□□□□ 0.17
HERPUD1-215ENST00000568676 MPOP05164 745 aa16.12■□□□□ 0.17
HERPUD1-215ENST00000568676 CTSLP07711 333 aa16.12■□□□□ 0.17
HERPUD1-215ENST00000568676 RHOCP08134 193 aa16.12■□□□□ 0.17
HERPUD1-215ENST00000568676 NOS2P35228 1153 aa16.12■□□□□ 0.17
HERPUD1-215ENST00000568676 RECQLP46063 649 aaPredicted RBP16.12■□□□□ 0.17
HERPUD1-215ENST00000568676 RPS21P63220 83 aaKnown RBP16.12■□□□□ 0.17
HERPUD1-215ENST00000568676 TAF5Q15542 800 aa16.12■□□□□ 0.17
HERPUD1-215ENST00000568676 BRMS1LQ5PSV4 323 aa16.12■□□□□ 0.17
HERPUD1-215ENST00000568676 KIAA1161Q6NSJ0 714 aa16.12■□□□□ 0.17
HERPUD1-215ENST00000568676 PCSK4Q6UW60 755 aa16.12■□□□□ 0.17
HERPUD1-215ENST00000568676 KYAT3Q6YP21 454 aaKnown RBP16.12■□□□□ 0.17
HERPUD1-215ENST00000568676 C11orf57Q6ZUT1 292 aaPredicted RBP16.12■□□□□ 0.17
HERPUD1-215ENST00000568676 ZDHHC17Q8IUH5 632 aa16.12■□□□□ 0.17
HERPUD1-215ENST00000568676 OR52K2Q8NGK3 314 aa16.12■□□□□ 0.17
HERPUD1-215ENST00000568676 GDPD2Q9HCC8 539 aa16.12■□□□□ 0.17
HERPUD1-215ENST00000568676 GPR27Q9NS67 375 aa16.12■□□□□ 0.17
HERPUD1-215ENST00000568676 PCDHGC3Q9UN70 934 aa16.12■□□□□ 0.17
HERPUD1-215ENST00000568676 SYNJ2BP-COX16A0A087WUM0 186 aa16.11■□□□□ 0.17
HERPUD1-215ENST00000568676 K7ESM1 405 aa16.11■□□□□ 0.17
HERPUD1-215ENST00000568676 PAGE1O75459 146 aa16.11■□□□□ 0.17
HERPUD1-215ENST00000568676 FGFR1OPO95684 399 aaKnown RBP16.11■□□□□ 0.17
HERPUD1-215ENST00000568676 MLLT3P42568 568 aaPredicted RBP16.11■□□□□ 0.17
HERPUD1-215ENST00000568676 NUMBP49757 651 aa16.11■□□□□ 0.17
HERPUD1-215ENST00000568676 NME3Q13232 169 aa16.11■□□□□ 0.17
HERPUD1-215ENST00000568676 TMEM259Q4ZIN3 620 aa16.11■□□□□ 0.17
HERPUD1-215ENST00000568676 LRRC31Q6UY01 552 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms