RNA–Protein interactions for RNA: ENST00000568559.1

TMEM170A-205, Transcript of transmembrane protein 170A, humanhuman

TSL 1 (best)

Gene TMEM170A, Length 4,345 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM170A-205ENST00000568559 SHBGP04278 402 aa12.37□□□□□ -0.43
TMEM170A-205ENST00000568559 TROVE2P10155 538 aaKnown RBP eCLIP12.37□□□□□ -0.43
TMEM170A-205ENST00000568559 CDK16Q00536 496 aa12.37□□□□□ -0.43
TMEM170A-205ENST00000568559 KLF1Q13351 362 aaPredicted RBP12.37□□□□□ -0.43
TMEM170A-205ENST00000568559 RASIP1Q5U651 963 aa12.37□□□□□ -0.43
TMEM170A-205ENST00000568559 PM20D1Q6GTS8 502 aa12.37□□□□□ -0.43
TMEM170A-205ENST00000568559 SEMA3CQ99985 751 aa12.37□□□□□ -0.43
TMEM170A-205ENST00000568559 TBL1YQ9BQ87 522 aa12.37□□□□□ -0.43
TMEM170A-205ENST00000568559 HERC2P3Q9BVR0 1158 aa12.37□□□□□ -0.43
TMEM170A-205ENST00000568559 SLC39A8Q9C0K1 460 aa12.37□□□□□ -0.43
TMEM170A-205ENST00000568559 PPCSQ9HAB8 311 aa12.37□□□□□ -0.43
TMEM170A-205ENST00000568559 THG1LQ9NWX6 298 aaKnown RBP12.37□□□□□ -0.43
TMEM170A-205ENST00000568559 SENP1Q9P0U3 644 aa12.37□□□□□ -0.43
TMEM170A-205ENST00000568559 TRIM49D1C9J1S8 452 aa12.37□□□□□ -0.43
TMEM170A-205ENST00000568559 TXNDC9O14530 226 aa12.37□□□□□ -0.43
TMEM170A-205ENST00000568559 INPPL1O15357 1258 aa12.37□□□□□ -0.43
TMEM170A-205ENST00000568559 NCF2P19878 526 aaPredicted RBP12.37□□□□□ -0.43
TMEM170A-205ENST00000568559 HTR7P34969 479 aa12.37□□□□□ -0.43
TMEM170A-205ENST00000568559 TTC31Q49AM3 519 aaPredicted RBP12.37□□□□□ -0.43
TMEM170A-205ENST00000568559 ANKRD22Q5VYY1 191 aa12.37□□□□□ -0.43
TMEM170A-205ENST00000568559 TRNP1Q6NT89 227 aa12.37□□□□□ -0.43
TMEM170A-205ENST00000568559 HIBCHQ6NVY1 386 aaPredicted RBP12.37□□□□□ -0.43
TMEM170A-205ENST00000568559 OTOP3Q7RTS5 596 aa12.37□□□□□ -0.43
TMEM170A-205ENST00000568559 LPCAT1Q8NF37 534 aa12.37□□□□□ -0.43
TMEM170A-205ENST00000568559 OR7D4Q8NG98 312 aa12.37□□□□□ -0.43
TMEM170A-205ENST00000568559 PLD4Q96BZ4 506 aa12.37□□□□□ -0.43
TMEM170A-205ENST00000568559 CLSTN3Q9BQT9 956 aa12.37□□□□□ -0.43
TMEM170A-205ENST00000568559 TM6SF2Q9BZW4 377 aa12.37□□□□□ -0.43
TMEM170A-205ENST00000568559 CRISPLD2Q9H0B8 497 aa12.37□□□□□ -0.43
TMEM170A-205ENST00000568559 GRHL1Q9NZI5 618 aa12.37□□□□□ -0.43
TMEM170A-205ENST00000568559 STX7O15400 261 aaKnown RBP12.36□□□□□ -0.43
TMEM170A-205ENST00000568559 BAG2O95816 211 aa12.36□□□□□ -0.43
TMEM170A-205ENST00000568559 CA3P07451 260 aa12.36□□□□□ -0.43
TMEM170A-205ENST00000568559 RAB33AQ14088 237 aa12.36□□□□□ -0.43
TMEM170A-205ENST00000568559 CCDC157Q569K6 752 aa12.36□□□□□ -0.43
TMEM170A-205ENST00000568559 SLC9A4Q6AI14 798 aa12.36□□□□□ -0.43
TMEM170A-205ENST00000568559 ZNF567Q8N184 647 aa12.36□□□□□ -0.43
TMEM170A-205ENST00000568559 PLA2G4CQ9UP65 541 aa12.36□□□□□ -0.43
TMEM170A-205ENST00000568559 CAPN7Q9Y6W3 813 aa12.36□□□□□ -0.43
TMEM170A-205ENST00000568559 SYNDIG1LA6NDD5 238 aa12.36□□□□□ -0.43
TMEM170A-205ENST00000568559 SLC9A3R1O14745 358 aaPredicted RBP12.36□□□□□ -0.43
TMEM170A-205ENST00000568559 BUD23O43709 281 aaKnown RBP12.36□□□□□ -0.43
TMEM170A-205ENST00000568559 CTSAP10619 480 aa12.36□□□□□ -0.43
TMEM170A-205ENST00000568559 SPRP35270 261 aaPredicted RBP12.36□□□□□ -0.43
TMEM170A-205ENST00000568559 SERPINB9P50453 376 aa12.36□□□□□ -0.43
TMEM170A-205ENST00000568559 LAMB3Q13751 1172 aa12.36□□□□□ -0.43
TMEM170A-205ENST00000568559 SCD5Q86SK9 330 aa12.36□□□□□ -0.43
TMEM170A-205ENST00000568559 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.36□□□□□ -0.43
TMEM170A-205ENST00000568559 PRCCQ92733 491 aaPredicted RBP12.36□□□□□ -0.43
TMEM170A-205ENST00000568559 HMCESQ96FZ2 354 aa12.36□□□□□ -0.43
TMEM170A-205ENST00000568559 ARHGEF38Q9NXL2 777 aa12.36□□□□□ -0.43
TMEM170A-205ENST00000568559 ANGPTL3Q9Y5C1 460 aa12.36□□□□□ -0.43
TMEM170A-205ENST00000568559 SLC30A1Q9Y6M5 507 aa12.36□□□□□ -0.43
TMEM170A-205ENST00000568559 ERI2A8K979 691 aaKnown RBP12.36□□□□□ -0.43
TMEM170A-205ENST00000568559 FGF19O95750 216 aa12.36□□□□□ -0.43
TMEM170A-205ENST00000568559 SLC20A2Q08357 652 aa12.36□□□□□ -0.43
TMEM170A-205ENST00000568559 OASLQ15646 514 aaKnown RBP12.36□□□□□ -0.43
TMEM170A-205ENST00000568559 UGP2Q16851 508 aa12.36□□□□□ -0.43
TMEM170A-205ENST00000568559 CACNA2D3Q8IZS8 1091 aa12.36□□□□□ -0.43
TMEM170A-205ENST00000568559 RIBC1Q8N443 379 aaPredicted RBP12.36□□□□□ -0.43
TMEM170A-205ENST00000568559 NAT16Q8N8M0 369 aa12.36□□□□□ -0.43
TMEM170A-205ENST00000568559 TTC8Q8TAM2 541 aa12.36□□□□□ -0.43
TMEM170A-205ENST00000568559 IARS2Q9NSE4 1012 aaKnown RBP12.36□□□□□ -0.43
TMEM170A-205ENST00000568559 PCMTD2Q9NV79 361 aa12.36□□□□□ -0.43
TMEM170A-205ENST00000568559 IRAK4Q9NWZ3 460 aa12.36□□□□□ -0.43
TMEM170A-205ENST00000568559 CACNA1GO43497 2377 aa12.36□□□□□ -0.43
TMEM170A-205ENST00000568559 TMEM120BA0PK00 339 aa12.36□□□□□ -0.43
TMEM170A-205ENST00000568559 C5orf60A6NFR6 353 aa12.36□□□□□ -0.43
TMEM170A-205ENST00000568559 TGM5O43548 720 aa12.36□□□□□ -0.43
TMEM170A-205ENST00000568559 GPC4O75487 556 aa12.36□□□□□ -0.43
TMEM170A-205ENST00000568559 CHN1P15882 459 aa12.36□□□□□ -0.43
TMEM170A-205ENST00000568559 USP10Q14694 798 aaKnown RBP12.36□□□□□ -0.43
TMEM170A-205ENST00000568559 GET4Q7L5D6 327 aaPredicted RBP12.36□□□□□ -0.43
TMEM170A-205ENST00000568559 MREGQ8N565 214 aa12.36□□□□□ -0.43
TMEM170A-205ENST00000568559 CFAP61Q8NHU2 1237 aa12.36□□□□□ -0.43
TMEM170A-205ENST00000568559 MDM1Q8TC05 714 aa12.36□□□□□ -0.43
TMEM170A-205ENST00000568559 XPO6Q96QU8 1125 aaKnown RBP12.36□□□□□ -0.43
TMEM170A-205ENST00000568559 NEDD8-MDP1E9PL57 170 aa12.35□□□□□ -0.43
TMEM170A-205ENST00000568559 COCHO43405 550 aa12.35□□□□□ -0.43
TMEM170A-205ENST00000568559 KRT4P19013 534 aa12.35□□□□□ -0.43
TMEM170A-205ENST00000568559 HCAR3P49019 387 aa12.35□□□□□ -0.43
TMEM170A-205ENST00000568559 NPY2RP49146 381 aa12.35□□□□□ -0.43
TMEM170A-205ENST00000568559 YBEYP58557 167 aaPredicted RBP12.35□□□□□ -0.43
TMEM170A-205ENST00000568559 GNA12Q03113 381 aa12.35□□□□□ -0.43
TMEM170A-205ENST00000568559 PARP15Q460N3 678 aa12.35□□□□□ -0.43
TMEM170A-205ENST00000568559 MS4A13Q5J8X5 152 aa12.35□□□□□ -0.43
TMEM170A-205ENST00000568559 RNASEH2BQ5TBB1 312 aaKnown RBP12.35□□□□□ -0.43
TMEM170A-205ENST00000568559 TTC39BQ5VTQ0 682 aaPredicted RBP12.35□□□□□ -0.43
TMEM170A-205ENST00000568559 SLC8B1Q6J4K2 584 aa12.35□□□□□ -0.43
TMEM170A-205ENST00000568559 SCG3Q8WXD2 468 aaKnown RBP12.35□□□□□ -0.43
TMEM170A-205ENST00000568559 PSMG2Q969U7 264 aa12.35□□□□□ -0.43
TMEM170A-205ENST00000568559 ADGRE3Q9BY15 652 aa12.35□□□□□ -0.43
TMEM170A-205ENST00000568559 RRP15Q9Y3B9 282 aaKnown RBP12.35□□□□□ -0.43
TMEM170A-205ENST00000568559 A0A1B0GVM2 712 aa12.35□□□□□ -0.43
TMEM170A-205ENST00000568559 TCAF2A6NFQ2 919 aa12.35□□□□□ -0.43
TMEM170A-205ENST00000568559 C2orf81A6NN90 581 aa12.35□□□□□ -0.43
TMEM170A-205ENST00000568559 GRXCR1A8MXD5 290 aa12.35□□□□□ -0.43
TMEM170A-205ENST00000568559 CCNCP24863 283 aa12.35□□□□□ -0.43
TMEM170A-205ENST00000568559 PTPN3P26045 913 aa12.35□□□□□ -0.43
TMEM170A-205ENST00000568559 KPNA2P52292 529 aaKnown RBP12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms