RNA–Protein interactions for RNA: ENST00000568219.5

PALB2-206, Transcript of partner and localizer of BRCA2, humanhuman

TSL 1 (best) BASIC

Gene PALB2, Length 3,963 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-206ENST00000568219 PSMB9P28065 219 aa11.07□□□□□ -0.64
PALB2-206ENST00000568219 PTPN7P35236 360 aa11.07□□□□□ -0.64
PALB2-206ENST00000568219 GSSP48637 474 aa11.07□□□□□ -0.64
PALB2-206ENST00000568219 CLCN3P51790 818 aa11.07□□□□□ -0.64
PALB2-206ENST00000568219 TPTEP56180 551 aa11.07□□□□□ -0.64
PALB2-206ENST00000568219 NFYCQ13952 458 aa11.07□□□□□ -0.64
PALB2-206ENST00000568219 TRIM25Q14258 630 aaKnown RBP11.07□□□□□ -0.64
PALB2-206ENST00000568219 PCLAFQ15004 111 aa11.07□□□□□ -0.64
PALB2-206ENST00000568219 FGD3Q5JSP0 725 aa11.07□□□□□ -0.64
PALB2-206ENST00000568219 WDR49Q8IV35 697 aa11.07□□□□□ -0.64
PALB2-206ENST00000568219 KIAA0319LQ8IZA0 1049 aa11.07□□□□□ -0.64
PALB2-206ENST00000568219 SAMD3Q8N6K7 520 aa11.07□□□□□ -0.64
PALB2-206ENST00000568219 C1orf50Q9BV19 199 aa11.07□□□□□ -0.64
PALB2-206ENST00000568219 MAGEB5Q9BZ81 275 aa11.07□□□□□ -0.64
PALB2-206ENST00000568219 FAM49AQ9H0Q0 323 aaPredicted RBP11.07□□□□□ -0.64
PALB2-206ENST00000568219 RAD21L1Q9H4I0 556 aa11.07□□□□□ -0.64
PALB2-206ENST00000568219 STN1Q9H668 368 aaKnown RBP11.07□□□□□ -0.64
PALB2-206ENST00000568219 EML4Q9HC35 981 aaKnown RBP11.07□□□□□ -0.64
PALB2-206ENST00000568219 C16orf96A6NNT2 1141 aa11.07□□□□□ -0.64
PALB2-206ENST00000568219 M0QYT0 321 aa11.07□□□□□ -0.64
PALB2-206ENST00000568219 CNOT3O75175 753 aaKnown RBP11.07□□□□□ -0.64
PALB2-206ENST00000568219 ALDOAP04075 364 aaKnown RBP11.07□□□□□ -0.64
PALB2-206ENST00000568219 CPOXP36551 454 aa11.07□□□□□ -0.64
PALB2-206ENST00000568219 TPI1P60174 286 aa11.07□□□□□ -0.64
PALB2-206ENST00000568219 OGFRL1Q5TC84 451 aaPredicted RBP11.07□□□□□ -0.64
PALB2-206ENST00000568219 ABRAXAS1Q6UWZ7 409 aa11.07□□□□□ -0.64
PALB2-206ENST00000568219 PRR23BQ6ZRT6 265 aa11.07□□□□□ -0.64
PALB2-206ENST00000568219 ADGRG6Q86SQ4 1221 aa11.07□□□□□ -0.64
PALB2-206ENST00000568219 PYROXD2Q8N2H3 581 aa11.07□□□□□ -0.64
PALB2-206ENST00000568219 TMEM130Q8N3G9 435 aa11.07□□□□□ -0.64
PALB2-206ENST00000568219 FNIP1Q8TF40 1166 aa11.07□□□□□ -0.64
PALB2-206ENST00000568219 ISOC1Q96CN7 298 aa11.07□□□□□ -0.64
PALB2-206ENST00000568219 TCF12Q99081 682 aa11.07□□□□□ -0.64
PALB2-206ENST00000568219 CPNE1Q99829 537 aa11.07□□□□□ -0.64
PALB2-206ENST00000568219 NAT9Q9BTE0 207 aa11.07□□□□□ -0.64
PALB2-206ENST00000568219 EIF2AQ9BY44 585 aaKnown RBP11.07□□□□□ -0.64
PALB2-206ENST00000568219 PRDM12Q9H4Q4 367 aa11.07□□□□□ -0.64
PALB2-206ENST00000568219 DHX33Q9H6R0 707 aaKnown RBP11.07□□□□□ -0.64
PALB2-206ENST00000568219 FANCEQ9HB96 536 aa11.07□□□□□ -0.64
PALB2-206ENST00000568219 SARS2Q9NP81 518 aaKnown RBP11.07□□□□□ -0.64
PALB2-206ENST00000568219 PXMP2Q9NR77 195 aa11.07□□□□□ -0.64
PALB2-206ENST00000568219 CHRAC1Q9NRG0 131 aa11.07□□□□□ -0.64
PALB2-206ENST00000568219 GIMAP4Q9NUV9 329 aa11.07□□□□□ -0.64
PALB2-206ENST00000568219 SFMBT1Q9UHJ3 866 aa11.07□□□□□ -0.64
PALB2-206ENST00000568219 SPATA31A1Q5TZJ5 1347 aa11.07□□□□□ -0.64
PALB2-206ENST00000568219 DHRS12A0PJE2 317 aa11.07□□□□□ -0.64
PALB2-206ENST00000568219 NCF1BA6NI72 391 aaPredicted RBP11.07□□□□□ -0.64
PALB2-206ENST00000568219 NCF1CA8MVU1 366 aaPredicted RBP11.07□□□□□ -0.64
PALB2-206ENST00000568219 NCF1P14598 390 aaPredicted RBP11.07□□□□□ -0.64
PALB2-206ENST00000568219 NAMPTP43490 491 aa11.07□□□□□ -0.64
PALB2-206ENST00000568219 HMGCS2P54868 508 aa11.07□□□□□ -0.64
PALB2-206ENST00000568219 SNAPC2Q13487 334 aa11.07□□□□□ -0.64
PALB2-206ENST00000568219 DNASE1L3Q13609 305 aa11.07□□□□□ -0.64
PALB2-206ENST00000568219 IKBKEQ14164 716 aa11.07□□□□□ -0.64
PALB2-206ENST00000568219 KCNJ11Q14654 390 aa11.07□□□□□ -0.64
PALB2-206ENST00000568219 FBXO48Q5FWF7 155 aa11.07□□□□□ -0.64
PALB2-206ENST00000568219 RSBN1Q5VWQ0 802 aaPredicted RBP11.07□□□□□ -0.64
PALB2-206ENST00000568219 SCIMPQ6UWF3 145 aa11.07□□□□□ -0.64
PALB2-206ENST00000568219 XYLT1Q86Y38 959 aa11.07□□□□□ -0.64
PALB2-206ENST00000568219 ZNF555Q8NEP9 628 aa11.07□□□□□ -0.64
PALB2-206ENST00000568219 OR9I1Q8NGQ6 314 aa11.07□□□□□ -0.64
PALB2-206ENST00000568219 CEP19Q96LK0 163 aa11.07□□□□□ -0.64
PALB2-206ENST00000568219 SLC29A1Q99808 456 aa11.07□□□□□ -0.64
PALB2-206ENST00000568219 ZBED2Q9BTP6 218 aa11.07□□□□□ -0.64
PALB2-206ENST00000568219 SDCBP2Q9H190 292 aa11.07□□□□□ -0.64
PALB2-206ENST00000568219 PNMA8BQ9ULN7 279 aaPredicted RBP11.07□□□□□ -0.64
PALB2-206ENST00000568219 ZNF510Q9Y2H8 683 aa11.07□□□□□ -0.64
PALB2-206ENST00000568219 WDR37Q9Y2I8 494 aa11.07□□□□□ -0.64
PALB2-206ENST00000568219 PCDHB12Q9Y5F1 795 aa11.07□□□□□ -0.64
PALB2-206ENST00000568219 CICQ96RK0 1608 aaPredicted RBP11.06□□□□□ -0.64
PALB2-206ENST00000568219 UBA6A0AVT1 1052 aaPredicted RBP11.06□□□□□ -0.64
PALB2-206ENST00000568219 TAF4O00268 1085 aa11.06□□□□□ -0.64
PALB2-206ENST00000568219 TBC1D4O60343 1298 aa11.06□□□□□ -0.64
PALB2-206ENST00000568219 HUS1O60921 280 aa11.06□□□□□ -0.64
PALB2-206ENST00000568219 SNRPB2P08579 225 aaKnown RBP11.06□□□□□ -0.64
PALB2-206ENST00000568219 NPR1P16066 1061 aa11.06□□□□□ -0.64
PALB2-206ENST00000568219 CAP2P40123 477 aa11.06□□□□□ -0.64
PALB2-206ENST00000568219 EFNA5P52803 228 aa11.06□□□□□ -0.64
PALB2-206ENST00000568219 RELAQ04206 551 aa11.06□□□□□ -0.64
PALB2-206ENST00000568219 PPP1R8Q12972 351 aaKnown RBP11.06□□□□□ -0.64
PALB2-206ENST00000568219 CYP2A13Q16696 494 aa11.06□□□□□ -0.64
PALB2-206ENST00000568219 PDCD4Q53EL6 469 aaKnown RBP11.06□□□□□ -0.64
PALB2-206ENST00000568219 STRIP1Q5VSL9 837 aa11.06□□□□□ -0.64
PALB2-206ENST00000568219 SCARA3Q6AZY7 606 aa11.06□□□□□ -0.64
PALB2-206ENST00000568219 ACMSDQ8TDX5 336 aa11.06□□□□□ -0.64
PALB2-206ENST00000568219 FBXL20Q96IG2 436 aa11.06□□□□□ -0.64
PALB2-206ENST00000568219 STK32BQ9NY57 414 aa11.06□□□□□ -0.64
PALB2-206ENST00000568219 RAD54BQ9Y620 910 aa11.06□□□□□ -0.64
PALB2-206ENST00000568219 NDUFB5O43674 189 aa11.06□□□□□ -0.64
PALB2-206ENST00000568219 MOCS2O96007 188 aaPredicted RBP11.06□□□□□ -0.64
PALB2-206ENST00000568219 LDLRP01130 860 aa11.06□□□□□ -0.64
PALB2-206ENST00000568219 CHRNA5P30532 468 aa11.06□□□□□ -0.64
PALB2-206ENST00000568219 RNF111Q6ZNA4 994 aa11.06□□□□□ -0.64
PALB2-206ENST00000568219 AMIGO3Q86WK7 504 aa11.06□□□□□ -0.64
PALB2-206ENST00000568219 BRSK2Q8IWQ3 736 aa11.06□□□□□ -0.64
PALB2-206ENST00000568219 CPNE9Q8IYJ1 553 aa11.06□□□□□ -0.64
PALB2-206ENST00000568219 SLC4A11Q8NBS3 891 aa11.06□□□□□ -0.64
PALB2-206ENST00000568219 SLC7A14Q8TBB6 771 aa11.06□□□□□ -0.64
PALB2-206ENST00000568219 NDRG1Q92597 394 aaKnown RBP11.06□□□□□ -0.64
PALB2-206ENST00000568219 EMID1Q96A84 441 aaPredicted RBP11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms