RNA–Protein interactions for RNA: ENST00000567947.1

CBFB-208, Transcript of core-binding factor subunit beta, human

TSL 3

Gene CBFB, Length 610 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CBFB-208	ENST00000567947	TSC22D3	Q99576	134 aa		5.15	□□□□□ -1.59
CBFB-208	ENST00000567947	SLX1A	Q9BQ83	275 aa		5.15	□□□□□ -1.59
CBFB-208	ENST00000567947	FAM192A	Q9GZU8	254 aa		5.15	□□□□□ -1.59
CBFB-208	ENST00000567947	HAUS4	Q9H6D7	363 aa		5.15	□□□□□ -1.59
CBFB-208	ENST00000567947	TYW1	Q9NV66	732 aa	Known RBP	5.15	□□□□□ -1.59
CBFB-208	ENST00000567947	TUBA8	Q9NY65	449 aa	Predicted RBP	5.15	□□□□□ -1.59
CBFB-208	ENST00000567947	TMOD2	Q9NZR1	351 aa		5.15	□□□□□ -1.59
CBFB-208	ENST00000567947	DKK3	Q9UBP4	350 aa		5.15	□□□□□ -1.59
CBFB-208	ENST00000567947	RNF14	Q9UBS8	474 aa		5.15	□□□□□ -1.59
CBFB-208	ENST00000567947	SERGEF	Q9UGK8	458 aa		5.15	□□□□□ -1.59
CBFB-208	ENST00000567947	DDX25	Q9UHL0	483 aa	Known RBP	5.15	□□□□□ -1.59
CBFB-208	ENST00000567947	HERC5	Q9UII4	1024 aa	Known RBP	5.15	□□□□□ -1.59
CBFB-208	ENST00000567947	ST3GAL5	Q9UNP4	418 aa		5.15	□□□□□ -1.59
CBFB-208	ENST00000567947	PARP14	Q460N5	1801 aa		5.15	□□□□□ -1.59
CBFB-208	ENST00000567947	MROH7-TTC4	A0A0A0MT08	1334 aa		5.15	□□□□□ -1.59
CBFB-208	ENST00000567947	ITIH6	Q6UXX5	1313 aa		5.15	□□□□□ -1.59
CBFB-208	ENST00000567947	ZNF236	Q9UL36	1845 aa		5.14	□□□□□ -1.59
CBFB-208	ENST00000567947	NAV1	Q8NEY1	1877 aa		5.14	□□□□□ -1.59
CBFB-208	ENST00000567947	LRRD1	A4D1F6	860 aa		5.14	□□□□□ -1.59
CBFB-208	ENST00000567947	MYO1F	O00160	1098 aa		5.14	□□□□□ -1.59
CBFB-208	ENST00000567947	SNAP23	O00161	211 aa		5.14	□□□□□ -1.59
CBFB-208	ENST00000567947	CEP104	O60308	925 aa		5.14	□□□□□ -1.59
CBFB-208	ENST00000567947	CTNND1	O60716	968 aa	Known RBP	5.14	□□□□□ -1.59
CBFB-208	ENST00000567947	N4BP1	O75113	896 aa	Known RBP	5.14	□□□□□ -1.59
CBFB-208	ENST00000567947	VPS4B	O75351	444 aa		5.14	□□□□□ -1.59
CBFB-208	ENST00000567947	LATS1	O95835	1130 aa		5.14	□□□□□ -1.59
CBFB-208	ENST00000567947	SLC3A2	P08195	630 aa	Known RBP	5.14	□□□□□ -1.59
CBFB-208	ENST00000567947	PPIF	P30405	207 aa	Known RBP	5.14	□□□□□ -1.59
CBFB-208	ENST00000567947	ZNF131	P52739	623 aa		5.14	□□□□□ -1.59
CBFB-208	ENST00000567947	ZNF134	P52741	427 aa		5.14	□□□□□ -1.59
CBFB-208	ENST00000567947	LOXL3	P58215	753 aa		5.14	□□□□□ -1.59
CBFB-208	ENST00000567947	RHBDL3	P58872	404 aa		5.14	□□□□□ -1.59
CBFB-208	ENST00000567947	SRSF4	Q08170	494 aa	Known RBP	5.14	□□□□□ -1.59
CBFB-208	ENST00000567947	PPIL2	Q13356	520 aa		5.14	□□□□□ -1.59
CBFB-208	ENST00000567947	BIRC3	Q13489	604 aa		5.14	□□□□□ -1.59
CBFB-208	ENST00000567947	ITIH4	Q14624	930 aa		5.14	□□□□□ -1.59
CBFB-208	ENST00000567947	PLS1	Q14651	629 aa		5.14	□□□□□ -1.59
CBFB-208	ENST00000567947	ARHGEF6	Q15052	776 aa		5.14	□□□□□ -1.59
CBFB-208	ENST00000567947	NECTIN1	Q15223	517 aa		5.14	□□□□□ -1.59
CBFB-208	ENST00000567947	TBCC	Q15814	346 aa		5.14	□□□□□ -1.59
CBFB-208	ENST00000567947	PTPRO	Q16827	1216 aa		5.14	□□□□□ -1.59
CBFB-208	ENST00000567947	SPDYC	Q5MJ68	293 aa		5.14	□□□□□ -1.59
CBFB-208	ENST00000567947	ATAT1	Q5SQI0	421 aa		5.14	□□□□□ -1.59
CBFB-208	ENST00000567947	SUMO4	Q6EEV6	95 aa		5.14	□□□□□ -1.59
CBFB-208	ENST00000567947	CDC42EP5	Q6NZY7	148 aa		5.14	□□□□□ -1.59
CBFB-208	ENST00000567947	ANKRD16	Q6P6B7	361 aa		5.14	□□□□□ -1.59
CBFB-208	ENST00000567947	LRIG3	Q6UXM1	1119 aa		5.14	□□□□□ -1.59
CBFB-208	ENST00000567947	CCDC80	Q76M96	950 aa		5.14	□□□□□ -1.59
CBFB-208	ENST00000567947	LCA5	Q86VQ0	697 aa		5.14	□□□□□ -1.59
CBFB-208	ENST00000567947	CEP57	Q86XR8	500 aa		5.14	□□□□□ -1.59
CBFB-208	ENST00000567947	LMNTD2	Q8IXW0	634 aa		5.14	□□□□□ -1.59
CBFB-208	ENST00000567947	RNF168	Q8IYW5	571 aa	Predicted RBP	5.14	□□□□□ -1.59
CBFB-208	ENST00000567947	FBXL16	Q8N461	479 aa		5.14	□□□□□ -1.59
CBFB-208	ENST00000567947	MMGT1	Q8N4V1	131 aa		5.14	□□□□□ -1.59
CBFB-208	ENST00000567947	CAMKK1	Q8N5S9	505 aa		5.14	□□□□□ -1.59
CBFB-208	ENST00000567947	ZNF473	Q8WTR7	871 aa	Known RBP	5.14	□□□□□ -1.59
CBFB-208	ENST00000567947	HPS3	Q969F9	1004 aa		5.14	□□□□□ -1.59
CBFB-208	ENST00000567947	CDK5RAP3	Q96JB5	506 aa		5.14	□□□□□ -1.59
CBFB-208	ENST00000567947	RUFY1	Q96T51	708 aa		5.14	□□□□□ -1.59
CBFB-208	ENST00000567947	SDF4	Q9BRK5	362 aa		5.14	□□□□□ -1.59
CBFB-208	ENST00000567947	VCX	Q9H320	206 aa		5.14	□□□□□ -1.59
CBFB-208	ENST00000567947	VCX3B	Q9H321	246 aa		5.14	□□□□□ -1.59
CBFB-208	ENST00000567947	GOLPH3L	Q9H4A5	285 aa		5.14	□□□□□ -1.59
CBFB-208	ENST00000567947	ZWILCH	Q9H900	591 aa		5.14	□□□□□ -1.59
CBFB-208	ENST00000567947	VCX3A	Q9NNX9	186 aa		5.14	□□□□□ -1.59
CBFB-208	ENST00000567947	DMAP1	Q9NPF5	467 aa	Predicted RBP	5.14	□□□□□ -1.59
CBFB-208	ENST00000567947	ARHGEF3	Q9NR81	526 aa		5.14	□□□□□ -1.59
CBFB-208	ENST00000567947	UTP6	Q9NYH9	597 aa	Known RBP	5.14	□□□□□ -1.59
CBFB-208	ENST00000567947	DBNL	Q9UJU6	430 aa	Known RBP	5.14	□□□□□ -1.59
CBFB-208	ENST00000567947	PADI4	Q9UM07	663 aa		5.14	□□□□□ -1.59
CBFB-208	ENST00000567947	DAAM1	Q9Y4D1	1078 aa		5.14	□□□□□ -1.59
CBFB-208	ENST00000567947	ASB3	Q9Y575	518 aa		5.14	□□□□□ -1.59
CBFB-208	ENST00000567947	ASTN2	O75129	1339 aa	Predicted RBP	5.14	□□□□□ -1.59
CBFB-208	ENST00000567947	BRCA2	P51587	3418 aa		5.13	□□□□□ -1.59
CBFB-208	ENST00000567947	DOCK3	Q8IZD9	2030 aa		5.13	□□□□□ -1.59
CBFB-208	ENST00000567947	TARM1	B6A8C7	271 aa		5.13	□□□□□ -1.59
CBFB-208	ENST00000567947	AKR1B15	C9JRZ8	316 aa	Predicted RBP	5.13	□□□□□ -1.59
CBFB-208	ENST00000567947	AGPS	O00116	658 aa		5.13	□□□□□ -1.59
CBFB-208	ENST00000567947	ZNF213	O14771	459 aa		5.13	□□□□□ -1.59
CBFB-208	ENST00000567947	IFIT3	O14879	490 aa	Known RBP	5.13	□□□□□ -1.59
CBFB-208	ENST00000567947	DCLK1	O15075	740 aa		5.13	□□□□□ -1.59
CBFB-208	ENST00000567947	BIRC5	O15392	142 aa		5.13	□□□□□ -1.59
CBFB-208	ENST00000567947	HSF2BP	O75031	334 aa		5.13	□□□□□ -1.59
CBFB-208	ENST00000567947	RNF8	O76064	485 aa		5.13	□□□□□ -1.59
CBFB-208	ENST00000567947	ABLIM3	O94929	683 aa		5.13	□□□□□ -1.59
CBFB-208	ENST00000567947	ATP6V1G2	O95670	118 aa		5.13	□□□□□ -1.59
CBFB-208	ENST00000567947	SERPINC1	P01008	464 aa		5.13	□□□□□ -1.59
CBFB-208	ENST00000567947	FAM163B	P0C2L3	166 aa		5.13	□□□□□ -1.59
CBFB-208	ENST00000567947	ATXN1L	P0C7T5	689 aa	Known RBP	5.13	□□□□□ -1.59
CBFB-208	ENST00000567947	EBLN1	P0CF75	366 aa		5.13	□□□□□ -1.59
CBFB-208	ENST00000567947	HARS	P12081	509 aa	Known RBP	5.13	□□□□□ -1.59
CBFB-208	ENST00000567947	CPA3	P15088	417 aa		5.13	□□□□□ -1.59
CBFB-208	ENST00000567947	DES	P17661	470 aa		5.13	□□□□□ -1.59
CBFB-208	ENST00000567947	CMA1	P23946	247 aa		5.13	□□□□□ -1.59
CBFB-208	ENST00000567947	CASP14	P31944	242 aa		5.13	□□□□□ -1.59
CBFB-208	ENST00000567947	MDH1	P40925	334 aa	Known RBP	5.13	□□□□□ -1.59
CBFB-208	ENST00000567947	VIPR2	P41587	438 aa		5.13	□□□□□ -1.59
CBFB-208	ENST00000567947	CLCN2	P51788	898 aa		5.13	□□□□□ -1.59
CBFB-208	ENST00000567947	ATXN1	P54253	815 aa	Known RBP	5.13	□□□□□ -1.59
CBFB-208	ENST00000567947	SSBP2	P81877	361 aa	Predicted RBP	5.13	□□□□□ -1.59

Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms