RNA–Protein interactions for RNA: ENST00000567843.1

GTF3C1-208, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 3

Gene GTF3C1, Length 474 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-208ENST00000567843 MSRB2Q9Y3D2 182 aa12.52□□□□□ -0.41
GTF3C1-208ENST00000567843 PAXBP1Q9Y5B6 917 aa12.52□□□□□ -0.41
GTF3C1-208ENST00000567843 A0A1W2PR77 199 aa12.51□□□□□ -0.41
GTF3C1-208ENST00000567843 C1QTNF3-AMACRE9PGA6 284 aa12.51□□□□□ -0.41
GTF3C1-208ENST00000567843 FAM72CH0Y354 149 aa12.51□□□□□ -0.41
GTF3C1-208ENST00000567843 ATP1A3P13637 1013 aa12.51□□□□□ -0.41
GTF3C1-208ENST00000567843 PRLRP16471 622 aa12.51□□□□□ -0.41
GTF3C1-208ENST00000567843 SDC4P31431 198 aa12.51□□□□□ -0.41
GTF3C1-208ENST00000567843 CHRNA3P32297 505 aa12.51□□□□□ -0.41
GTF3C1-208ENST00000567843 ACVRL1P37023 503 aa12.51□□□□□ -0.41
GTF3C1-208ENST00000567843 MYL5Q02045 173 aa12.51□□□□□ -0.41
GTF3C1-208ENST00000567843 ARSIQ5FYB1 569 aa12.51□□□□□ -0.41
GTF3C1-208ENST00000567843 C6orf118Q5T5N4 469 aa12.51□□□□□ -0.41
GTF3C1-208ENST00000567843 FAM72AQ5TYM5 149 aa12.51□□□□□ -0.41
GTF3C1-208ENST00000567843 AGBL4Q5VU57 503 aa12.51□□□□□ -0.41
GTF3C1-208ENST00000567843 SMYD5Q6GMV2 418 aa12.51□□□□□ -0.41
GTF3C1-208ENST00000567843 FAM72DQ6L9T8 149 aa12.51□□□□□ -0.41
GTF3C1-208ENST00000567843 RWDD4Q6NW29 188 aaKnown RBP12.51□□□□□ -0.41
GTF3C1-208ENST00000567843 DBX2Q6ZNG2 339 aa12.51□□□□□ -0.41
GTF3C1-208ENST00000567843 SETD3Q86TU7 594 aaPredicted RBP12.51□□□□□ -0.41
GTF3C1-208ENST00000567843 PRPF39Q86UA1 669 aaKnown RBP12.51□□□□□ -0.41
GTF3C1-208ENST00000567843 FAM72BQ86X60 149 aa12.51□□□□□ -0.41
GTF3C1-208ENST00000567843 ZNF677Q86XU0 584 aa12.51□□□□□ -0.41
GTF3C1-208ENST00000567843 AOPEPQ8N6M6 819 aa12.51□□□□□ -0.41
GTF3C1-208ENST00000567843 OR2A12Q8NGT7 310 aa12.51□□□□□ -0.41
GTF3C1-208ENST00000567843 BAHD1Q8TBE0 780 aaPredicted RBP12.51□□□□□ -0.41
GTF3C1-208ENST00000567843 ADAMTS14Q8WXS8 1223 aa12.51□□□□□ -0.41
GTF3C1-208ENST00000567843 C1orf74Q96LT6 269 aa12.51□□□□□ -0.41
GTF3C1-208ENST00000567843 ZYG11BQ9C0D3 744 aa12.51□□□□□ -0.41
GTF3C1-208ENST00000567843 CAAP1Q9H8G2 361 aa12.51□□□□□ -0.41
GTF3C1-208ENST00000567843 ATP13A1Q9HD20 1204 aa12.51□□□□□ -0.41
GTF3C1-208ENST00000567843 NDFIP2Q9NV92 336 aa12.51□□□□□ -0.41
GTF3C1-208ENST00000567843 TOR4AQ9NXH8 423 aa12.51□□□□□ -0.41
GTF3C1-208ENST00000567843 ADAM22Q9P0K1 906 aa12.51□□□□□ -0.41
GTF3C1-208ENST00000567843 LIMA1Q9UHB6 759 aaKnown RBP12.51□□□□□ -0.41
GTF3C1-208ENST00000567843 APOBEC2Q9Y235 224 aaKnown RBP12.51□□□□□ -0.41
GTF3C1-208ENST00000567843 HS3ST2Q9Y278 367 aa12.51□□□□□ -0.41
GTF3C1-208ENST00000567843 PCDHGB2Q9Y5G2 931 aa12.51□□□□□ -0.41
GTF3C1-208ENST00000567843 PKD1L2Q7Z442 2459 aa12.51□□□□□ -0.41
GTF3C1-208ENST00000567843 PLXNA2O75051 1894 aa12.51□□□□□ -0.41
GTF3C1-208ENST00000567843 CFAP47Q6ZTR5 3102 aa12.5□□□□□ -0.41
GTF3C1-208ENST00000567843 IGLV3-10A0A075B6K4 115 aa12.5□□□□□ -0.41
GTF3C1-208ENST00000567843 A0A1B0GTQ1 180 aa12.5□□□□□ -0.41
GTF3C1-208ENST00000567843 LGALS16A8MUM7 142 aa12.5□□□□□ -0.41
GTF3C1-208ENST00000567843 GOLGA6L22H0YM25 854 aa12.5□□□□□ -0.41
GTF3C1-208ENST00000567843 SLC31A1O15431 190 aa12.5□□□□□ -0.41
GTF3C1-208ENST00000567843 PLRG1O43660 514 aaKnown RBP12.5□□□□□ -0.41
GTF3C1-208ENST00000567843 RNGTTO60942 597 aaKnown RBP12.5□□□□□ -0.41
GTF3C1-208ENST00000567843 UNGP13051 313 aaPredicted RBP12.5□□□□□ -0.41
GTF3C1-208ENST00000567843 RFC1P35251 1148 aaPredicted RBP12.5□□□□□ -0.41
GTF3C1-208ENST00000567843 ADRA1BP35368 520 aa12.5□□□□□ -0.41
GTF3C1-208ENST00000567843 GRK6P43250 576 aa12.5□□□□□ -0.41
GTF3C1-208ENST00000567843 VASPP50552 380 aaPredicted RBP12.5□□□□□ -0.41
GTF3C1-208ENST00000567843 CLDN6P56747 220 aa12.5□□□□□ -0.41
GTF3C1-208ENST00000567843 TAS2R38P59533 333 aa12.5□□□□□ -0.41
GTF3C1-208ENST00000567843 PTP4A2Q12974 167 aa12.5□□□□□ -0.41
GTF3C1-208ENST00000567843 BNIP3Q12983 259 aa12.5□□□□□ -0.41
GTF3C1-208ENST00000567843 NCAPHQ15003 741 aa12.5□□□□□ -0.41
GTF3C1-208ENST00000567843 SHBQ15464 509 aa12.5□□□□□ -0.41
GTF3C1-208ENST00000567843 C22orf39Q6P5X5 142 aa12.5□□□□□ -0.41
GTF3C1-208ENST00000567843 DPY19L3Q6ZPD9 716 aa12.5□□□□□ -0.41
GTF3C1-208ENST00000567843 BNIPLQ7Z465 357 aa12.5□□□□□ -0.41
GTF3C1-208ENST00000567843 CCDC185Q8N715 623 aa12.5□□□□□ -0.41
GTF3C1-208ENST00000567843 DCAF4L2Q8NA75 395 aa12.5□□□□□ -0.41
GTF3C1-208ENST00000567843 KDF1Q8NAX2 398 aaPredicted RBP12.5□□□□□ -0.41
GTF3C1-208ENST00000567843 NETO2Q8NC67 525 aa12.5□□□□□ -0.41
GTF3C1-208ENST00000567843 ANKRD20A12PQ8NF67 263 aa12.5□□□□□ -0.41
GTF3C1-208ENST00000567843 HAPLN3Q96S86 360 aa12.5□□□□□ -0.41
GTF3C1-208ENST00000567843 ELF4Q99607 663 aaPredicted RBP12.5□□□□□ -0.41
GTF3C1-208ENST00000567843 FZD3Q9NPG1 666 aa12.5□□□□□ -0.41
GTF3C1-208ENST00000567843 GDF3Q9NR23 364 aa12.5□□□□□ -0.41
GTF3C1-208ENST00000567843 ARHGAP20Q9P2F6 1191 aa12.5□□□□□ -0.41
GTF3C1-208ENST00000567843 ZNF212Q9UDV6 495 aa12.5□□□□□ -0.41
GTF3C1-208ENST00000567843 DNAI1Q9UI46 699 aa12.5□□□□□ -0.41
GTF3C1-208ENST00000567843 FCF1Q9Y324 198 aaKnown RBP12.5□□□□□ -0.41
GTF3C1-208ENST00000567843 TMEM131Q92545 1883 aa12.5□□□□□ -0.41
GTF3C1-208ENST00000567843 CACNA1GO43497 2377 aa12.5□□□□□ -0.41
GTF3C1-208ENST00000567843 A0A1W2PQU0 124 aa12.49□□□□□ -0.41
GTF3C1-208ENST00000567843 ILVBLA1L0T0 632 aa12.49□□□□□ -0.41
GTF3C1-208ENST00000567843 FAM149AA5PLN7 773 aa12.49□□□□□ -0.41
GTF3C1-208ENST00000567843 C2CD4BA6NLJ0 364 aa12.49□□□□□ -0.41
GTF3C1-208ENST00000567843 C10orf142B7Z368 130 aa12.49□□□□□ -0.41
GTF3C1-208ENST00000567843 TLR4O00206 839 aa12.49□□□□□ -0.41
GTF3C1-208ENST00000567843 TEX33O43247 280 aa12.49□□□□□ -0.41
GTF3C1-208ENST00000567843 LATO43561 262 aa12.49□□□□□ -0.41
GTF3C1-208ENST00000567843 ITGAVP06756 1048 aa12.49□□□□□ -0.41
GTF3C1-208ENST00000567843 KRT3P12035 628 aa12.49□□□□□ -0.41
GTF3C1-208ENST00000567843 GKP32189 559 aa12.49□□□□□ -0.41
GTF3C1-208ENST00000567843 NSFP46459 744 aaKnown RBP12.49□□□□□ -0.41
GTF3C1-208ENST00000567843 HDAC4P56524 1084 aa12.49□□□□□ -0.41
GTF3C1-208ENST00000567843 NXPH1P58417 271 aa12.49□□□□□ -0.41
GTF3C1-208ENST00000567843 ARF5P84085 180 aa12.49□□□□□ -0.41
GTF3C1-208ENST00000567843 GNA12Q03113 381 aa12.49□□□□□ -0.41
GTF3C1-208ENST00000567843 TYRO3Q06418 890 aa12.49□□□□□ -0.41
GTF3C1-208ENST00000567843 SCAPQ12770 1279 aa12.49□□□□□ -0.41
GTF3C1-208ENST00000567843 DNAJC3Q13217 504 aa12.49□□□□□ -0.41
GTF3C1-208ENST00000567843 CLEC16AQ2KHT3 1053 aa12.49□□□□□ -0.41
GTF3C1-208ENST00000567843 CCDC183Q5T5S1 534 aa12.49□□□□□ -0.41
GTF3C1-208ENST00000567843 PIP5KL1Q5T9C9 394 aa12.49□□□□□ -0.41
GTF3C1-208ENST00000567843 NAPEPLDQ6IQ20 393 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms