RNA–Protein interactions for RNA: ENST00000567635.5

SF3B3-209, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 5

Gene SF3B3, Length 630 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-209ENST00000567635 SMAD6O43541 496 aaKnown RBP7.08□□□□□ -1.28
SF3B3-209ENST00000567635 BNIP3LO60238 219 aa7.08□□□□□ -1.28
SF3B3-209ENST00000567635 SH3BP5O60239 455 aa7.08□□□□□ -1.28
SF3B3-209ENST00000567635 DFNA5O60443 496 aa7.08□□□□□ -1.28
SF3B3-209ENST00000567635 SNAP91O60641 907 aa7.08□□□□□ -1.28
SF3B3-209ENST00000567635 CER1O95813 267 aa7.08□□□□□ -1.28
SF3B3-209ENST00000567635 IGHV4-34P06331 123 aa7.08□□□□□ -1.28
SF3B3-209ENST00000567635 ZNF883P0CG24 379 aa7.08□□□□□ -1.28
SF3B3-209ENST00000567635 SRCP12931 536 aa7.08□□□□□ -1.28
SF3B3-209ENST00000567635 GPD1P21695 349 aa7.08□□□□□ -1.28
SF3B3-209ENST00000567635 DRD3P35462 400 aa7.08□□□□□ -1.28
SF3B3-209ENST00000567635 ETFBP38117 255 aa7.08□□□□□ -1.28
SF3B3-209ENST00000567635 GRIA4P48058 902 aa7.08□□□□□ -1.28
SF3B3-209ENST00000567635 ZNF143P52747 638 aaPredicted RBP7.08□□□□□ -1.28
SF3B3-209ENST00000567635 HDAC4P56524 1084 aa7.08□□□□□ -1.28
SF3B3-209ENST00000567635 RACK1P63244 317 aaKnown RBP7.08□□□□□ -1.28
SF3B3-209ENST00000567635 BNC1Q01954 994 aa7.08□□□□□ -1.28
SF3B3-209ENST00000567635 NRG1Q02297 640 aaPredicted RBP7.08□□□□□ -1.28
SF3B3-209ENST00000567635 GNA12Q03113 381 aa7.08□□□□□ -1.28
SF3B3-209ENST00000567635 ZNF252P-AS1Q0IIN9 211 aa7.08□□□□□ -1.28
SF3B3-209ENST00000567635 CCDC15Q0P6D6 951 aa7.08□□□□□ -1.28
SF3B3-209ENST00000567635 NR1I3Q14994 352 aa7.08□□□□□ -1.28
SF3B3-209ENST00000567635 SUZ12Q15022 739 aaKnown RBP7.08□□□□□ -1.28
SF3B3-209ENST00000567635 IQCB1Q15051 598 aa7.08□□□□□ -1.28
SF3B3-209ENST00000567635 KIF19Q2TAC6 998 aa7.08□□□□□ -1.28
SF3B3-209ENST00000567635 RETSATQ6NUM9 610 aa7.08□□□□□ -1.28
SF3B3-209ENST00000567635 RWDD4Q6NW29 188 aaKnown RBP7.08□□□□□ -1.28
SF3B3-209ENST00000567635 PPP1R2P3Q6NXS1 205 aa7.08□□□□□ -1.28
SF3B3-209ENST00000567635 Q6ZVU0 165 aa7.08□□□□□ -1.28
SF3B3-209ENST00000567635 MON1BQ7L1V2 547 aa7.08□□□□□ -1.28
SF3B3-209ENST00000567635 SLFN11Q7Z7L1 901 aa7.08□□□□□ -1.28
SF3B3-209ENST00000567635 DRC7Q8IY82 874 aa7.08□□□□□ -1.28
SF3B3-209ENST00000567635 MCOLN2Q8IZK6 566 aa7.08□□□□□ -1.28
SF3B3-209ENST00000567635 DCAF4L2Q8NA75 395 aa7.08□□□□□ -1.28
SF3B3-209ENST00000567635 C3orf20Q8ND61 904 aa7.08□□□□□ -1.28
SF3B3-209ENST00000567635 TMIEQ8NEW7 156 aa7.08□□□□□ -1.28
SF3B3-209ENST00000567635 OR7D4Q8NG98 312 aa7.08□□□□□ -1.28
SF3B3-209ENST00000567635 PIP4K2CQ8TBX8 421 aa7.08□□□□□ -1.28
SF3B3-209ENST00000567635 FAM172AQ8WUF8 416 aa7.08□□□□□ -1.28
SF3B3-209ENST00000567635 BAP1Q92560 729 aa7.08□□□□□ -1.28
SF3B3-209ENST00000567635 SKA1Q96BD8 255 aa7.08□□□□□ -1.28
SF3B3-209ENST00000567635 VCPIP1Q96JH7 1222 aa7.08□□□□□ -1.28
SF3B3-209ENST00000567635 CCDC114Q96M63 670 aa7.08□□□□□ -1.28
SF3B3-209ENST00000567635 NAP1L5Q96NT1 182 aaPredicted RBP7.08□□□□□ -1.28
SF3B3-209ENST00000567635 ORAI3Q9BRQ5 295 aa7.08□□□□□ -1.28
SF3B3-209ENST00000567635 EDEM3Q9BZQ6 932 aa7.08□□□□□ -1.28
SF3B3-209ENST00000567635 KDM4CQ9H3R0 1056 aa7.08□□□□□ -1.28
SF3B3-209ENST00000567635 IL21RQ9HBE5 538 aa7.08□□□□□ -1.28
SF3B3-209ENST00000567635 AIPL1Q9NZN9 384 aa7.08□□□□□ -1.28
SF3B3-209ENST00000567635 ZNF212Q9UDV6 495 aa7.08□□□□□ -1.28
SF3B3-209ENST00000567635 VPS51Q9UID3 782 aa7.08□□□□□ -1.28
SF3B3-209ENST00000567635 SARDHQ9UL12 918 aa7.08□□□□□ -1.28
SF3B3-209ENST00000567635 TPX2Q9ULW0 747 aaKnown RBP7.08□□□□□ -1.28
SF3B3-209ENST00000567635 ANKRD6Q9Y2G4 727 aa7.08□□□□□ -1.28
SF3B3-209ENST00000567635 PCDHB9Q9Y5E1 797 aa7.08□□□□□ -1.28
SF3B3-209ENST00000567635 SNX11Q9Y5W9 270 aa7.08□□□□□ -1.28
SF3B3-209ENST00000567635 SLCO1B1Q9Y6L6 691 aa7.08□□□□□ -1.28
SF3B3-209ENST00000567635 ACACAQ13085 2346 aa7.07□□□□□ -1.28
SF3B3-209ENST00000567635 LRRK1Q38SD2 2015 aa7.07□□□□□ -1.28
SF3B3-209ENST00000567635 A0A1B0GTH6 734 aa7.07□□□□□ -1.28
SF3B3-209ENST00000567635 SPAARA0A1B0GVQ0 90 aa7.07□□□□□ -1.28
SF3B3-209ENST00000567635 A0A1W2PQC6 194 aa7.07□□□□□ -1.28
SF3B3-209ENST00000567635 TCRBV5S1A1TA0A578 114 aa7.07□□□□□ -1.28
SF3B3-209ENST00000567635 C1QTNF3-AMACRE9PGA6 284 aa7.07□□□□□ -1.28
SF3B3-209ENST00000567635 FAM72CH0Y354 149 aa7.07□□□□□ -1.28
SF3B3-209ENST00000567635 PLK4O00444 970 aa7.07□□□□□ -1.28
SF3B3-209ENST00000567635 KCNK3O14649 394 aa7.07□□□□□ -1.28
SF3B3-209ENST00000567635 VILLO15195 856 aa7.07□□□□□ -1.28
SF3B3-209ENST00000567635 RTN2O75298 545 aa7.07□□□□□ -1.28
SF3B3-209ENST00000567635 ZMPSTE24O75844 475 aa7.07□□□□□ -1.28
SF3B3-209ENST00000567635 SERPINC1P01008 464 aa7.07□□□□□ -1.28
SF3B3-209ENST00000567635 PRNPP04156 253 aa7.07□□□□□ -1.28
SF3B3-209ENST00000567635 RHOQP17081 205 aa7.07□□□□□ -1.28
SF3B3-209ENST00000567635 DESP17661 470 aa7.07□□□□□ -1.28
SF3B3-209ENST00000567635 GLDCP23378 1020 aa7.07□□□□□ -1.28
SF3B3-209ENST00000567635 RRM1P23921 792 aa7.07□□□□□ -1.28
SF3B3-209ENST00000567635 CHRNA3P32297 505 aa7.07□□□□□ -1.28
SF3B3-209ENST00000567635 NUDT1P36639 197 aa7.07□□□□□ -1.28
SF3B3-209ENST00000567635 RECQLP46063 649 aaPredicted RBP7.07□□□□□ -1.28
SF3B3-209ENST00000567635 METAP1P53582 386 aa7.07□□□□□ -1.28
SF3B3-209ENST00000567635 ADPRHP54922 357 aa7.07□□□□□ -1.28
SF3B3-209ENST00000567635 C21orf59P57076 290 aa7.07□□□□□ -1.28
SF3B3-209ENST00000567635 RPL7AP62424 266 aaKnown RBP7.07□□□□□ -1.28
SF3B3-209ENST00000567635 TPM4P67936 248 aa7.07□□□□□ -1.28
SF3B3-209ENST00000567635 SIM1P81133 766 aaPredicted RBP7.07□□□□□ -1.28
SF3B3-209ENST00000567635 CNTN1Q12860 1018 aa7.07□□□□□ -1.28
SF3B3-209ENST00000567635 TRIP6Q15654 476 aaKnown RBP7.07□□□□□ -1.28
SF3B3-209ENST00000567635 KLHL40Q2TBA0 621 aa7.07□□□□□ -1.28
SF3B3-209ENST00000567635 POM121L1PQ3SYA9 428 aa7.07□□□□□ -1.28
SF3B3-209ENST00000567635 FAM72AQ5TYM5 149 aa7.07□□□□□ -1.28
SF3B3-209ENST00000567635 MANEALQ5VSG8 457 aa7.07□□□□□ -1.28
SF3B3-209ENST00000567635 SFMBT2Q5VUG0 894 aa7.07□□□□□ -1.28
SF3B3-209ENST00000567635 FAM72DQ6L9T8 149 aa7.07□□□□□ -1.28
SF3B3-209ENST00000567635 DNAJC24Q6P3W2 148 aa7.07□□□□□ -1.28
SF3B3-209ENST00000567635 SCYL2Q6P3W7 929 aa7.07□□□□□ -1.28
SF3B3-209ENST00000567635 DCUN1D2Q6PH85 259 aa7.07□□□□□ -1.28
SF3B3-209ENST00000567635 LINGO4Q6UY18 593 aa7.07□□□□□ -1.28
SF3B3-209ENST00000567635 DBX2Q6ZNG2 339 aa7.07□□□□□ -1.28
SF3B3-209ENST00000567635 ADAT2Q7Z6V5 191 aaKnown RBP7.07□□□□□ -1.28
SF3B3-209ENST00000567635 PRPF39Q86UA1 669 aaKnown RBP7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms