RNA–Protein interactions for RNA: ENST00000567250.5

SF3B3-208, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 3

Gene SF3B3, Length 1,084 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-208ENST00000567250 RCOR2Q8IZ40 523 aa12.43□□□□□ -0.42
SF3B3-208ENST00000567250 ATPAF2Q8N5M1 289 aa12.43□□□□□ -0.42
SF3B3-208ENST00000567250 NPWQ8N729 165 aa12.43□□□□□ -0.42
SF3B3-208ENST00000567250 OR2T3Q8NH03 318 aa12.43□□□□□ -0.42
SF3B3-208ENST00000567250 RAPGEF5Q92565 580 aa12.43□□□□□ -0.42
SF3B3-208ENST00000567250 MYO19Q96H55 970 aa12.43□□□□□ -0.42
SF3B3-208ENST00000567250 CELF6Q96J87 481 aaKnown RBP12.43□□□□□ -0.42
SF3B3-208ENST00000567250 RNF157Q96PX1 679 aa12.43□□□□□ -0.42
SF3B3-208ENST00000567250 KCNF1Q9H3M0 494 aa12.43□□□□□ -0.42
SF3B3-208ENST00000567250 HAUS2Q9NVX0 235 aa12.43□□□□□ -0.42
SF3B3-208ENST00000567250 EBF1Q9UH73 591 aa12.43□□□□□ -0.42
SF3B3-208ENST00000567250 PCDHA3Q9Y5H8 950 aa12.43□□□□□ -0.42
SF3B3-208ENST00000567250 RAD54BQ9Y620 910 aa12.43□□□□□ -0.42
SF3B3-208ENST00000567250 CACNA1IQ9P0X4 2223 aa12.43□□□□□ -0.42
SF3B3-208ENST00000567250 NUP205Q92621 2012 aa12.43□□□□□ -0.42
SF3B3-208ENST00000567250 A0A0U1RQJ8 604 aa12.42□□□□□ -0.42
SF3B3-208ENST00000567250 A0A1W2PQF6 199 aa12.42□□□□□ -0.42
SF3B3-208ENST00000567250 ANTXRLA6NF34 631 aa12.42□□□□□ -0.42
SF3B3-208ENST00000567250 WASH3PC4AMC7 463 aa12.42□□□□□ -0.42
SF3B3-208ENST00000567250 APOL1O14791 398 aa12.42□□□□□ -0.42
SF3B3-208ENST00000567250 MFSD11O43934 449 aa12.42□□□□□ -0.42
SF3B3-208ENST00000567250 ZMPSTE24O75844 475 aa12.42□□□□□ -0.42
SF3B3-208ENST00000567250 SP9P0CG40 484 aa12.42□□□□□ -0.42
SF3B3-208ENST00000567250 HLA-EP13747 358 aa12.42□□□□□ -0.42
SF3B3-208ENST00000567250 MX2P20592 715 aa12.42□□□□□ -0.42
SF3B3-208ENST00000567250 COL9A1P20849 921 aa12.42□□□□□ -0.42
SF3B3-208ENST00000567250 IL4RP24394 825 aa12.42□□□□□ -0.42
SF3B3-208ENST00000567250 NUMBP49757 651 aa12.42□□□□□ -0.42
SF3B3-208ENST00000567250 SFSWAPQ12872 951 aaKnown RBP12.42□□□□□ -0.42
SF3B3-208ENST00000567250 PAFAH1B3Q15102 231 aaKnown RBP12.42□□□□□ -0.42
SF3B3-208ENST00000567250 DLG2Q15700 870 aa12.42□□□□□ -0.42
SF3B3-208ENST00000567250 PPP2R5EQ16537 467 aa12.42□□□□□ -0.42
SF3B3-208ENST00000567250 TTC31Q49AM3 519 aaPredicted RBP12.42□□□□□ -0.42
SF3B3-208ENST00000567250 INO80DQ53TQ3 878 aaPredicted RBP12.42□□□□□ -0.42
SF3B3-208ENST00000567250 TMCO4Q5TGY1 634 aa12.42□□□□□ -0.42
SF3B3-208ENST00000567250 AFMIDQ63HM1 303 aa12.42□□□□□ -0.42
SF3B3-208ENST00000567250 TIGD7Q6NT04 549 aaPredicted RBP12.42□□□□□ -0.42
SF3B3-208ENST00000567250 TMEM92Q6UXU6 159 aa12.42□□□□□ -0.42
SF3B3-208ENST00000567250 BZW1Q7L1Q6 419 aaKnown RBP12.42□□□□□ -0.42
SF3B3-208ENST00000567250 LONP2Q86WA8 852 aa12.42□□□□□ -0.42
SF3B3-208ENST00000567250 RFX6Q8HWS3 928 aa12.42□□□□□ -0.42
SF3B3-208ENST00000567250 PGBD3Q8N328 593 aa12.42□□□□□ -0.42
SF3B3-208ENST00000567250 PCDH20Q8N6Y1 951 aaKnown RBP12.42□□□□□ -0.42
SF3B3-208ENST00000567250 MDGA1Q8NFP4 955 aa12.42□□□□□ -0.42
SF3B3-208ENST00000567250 PCDH19Q8TAB3 1148 aa12.42□□□□□ -0.42
SF3B3-208ENST00000567250 NSMCE1Q8WV22 266 aa12.42□□□□□ -0.42
SF3B3-208ENST00000567250 HMGB4Q8WW32 186 aa12.42□□□□□ -0.42
SF3B3-208ENST00000567250 ATRIPQ8WXE1 791 aa12.42□□□□□ -0.42
SF3B3-208ENST00000567250 RNF25Q96BH1 459 aaPredicted RBP12.42□□□□□ -0.42
SF3B3-208ENST00000567250 SPACA7Q96KW9 195 aa12.42□□□□□ -0.42
SF3B3-208ENST00000567250 SLC39A8Q9C0K1 460 aa12.42□□□□□ -0.42
SF3B3-208ENST00000567250 NOL6Q9H6R4 1146 aaKnown RBP12.42□□□□□ -0.42
SF3B3-208ENST00000567250 ZSCAN32Q9NX65 697 aa12.42□□□□□ -0.42
SF3B3-208ENST00000567250 UBA2Q9UBT2 640 aaPredicted RBP12.42□□□□□ -0.42
SF3B3-208ENST00000567250 SCML1Q9UN30 329 aa12.42□□□□□ -0.42
SF3B3-208ENST00000567250 PCDHGA2Q9Y5H1 932 aa12.42□□□□□ -0.42
SF3B3-208ENST00000567250 WDFY4Q6ZS81 3184 aa12.41□□□□□ -0.42
SF3B3-208ENST00000567250 C3orf70A6NLC5 250 aaPredicted RBP12.41□□□□□ -0.42
SF3B3-208ENST00000567250 TTC34A8MYJ7 566 aa12.41□□□□□ -0.42
SF3B3-208ENST00000567250 AXIN1O15169 862 aa12.41□□□□□ -0.42
SF3B3-208ENST00000567250 PRAMEF11O60813 436 aa12.41□□□□□ -0.42
SF3B3-208ENST00000567250 ZNF217O75362 1048 aa12.41□□□□□ -0.42
SF3B3-208ENST00000567250 FTCDO95954 541 aa12.41□□□□□ -0.42
SF3B3-208ENST00000567250 PYGBP11216 843 aa12.41□□□□□ -0.42
SF3B3-208ENST00000567250 ACADMP11310 421 aa12.41□□□□□ -0.42
SF3B3-208ENST00000567250 TDGF1P13385 188 aa12.41□□□□□ -0.42
SF3B3-208ENST00000567250 NDUFV2P19404 249 aa12.41□□□□□ -0.42
SF3B3-208ENST00000567250 GLDCP23378 1020 aa12.41□□□□□ -0.42
SF3B3-208ENST00000567250 CNR2P34972 360 aa12.41□□□□□ -0.42
SF3B3-208ENST00000567250 CDKN2BP42772 138 aa12.41□□□□□ -0.42
SF3B3-208ENST00000567250 MARCKSL1P49006 195 aa12.41□□□□□ -0.42
SF3B3-208ENST00000567250 PAPOLAP51003 745 aaKnown RBP12.41□□□□□ -0.42
SF3B3-208ENST00000567250 ZBTB16Q05516 673 aa12.41□□□□□ -0.42
SF3B3-208ENST00000567250 IL10RBQ08334 325 aa12.41□□□□□ -0.42
SF3B3-208ENST00000567250 BYSLQ13895 437 aaKnown RBP12.41□□□□□ -0.42
SF3B3-208ENST00000567250 RFTN1Q14699 578 aaPredicted RBP12.41□□□□□ -0.42
SF3B3-208ENST00000567250 ZNF776Q68DI1 518 aaPredicted RBP12.41□□□□□ -0.42
SF3B3-208ENST00000567250 SLC9A4Q6AI14 798 aa12.41□□□□□ -0.42
SF3B3-208ENST00000567250 KIAA1211LQ6NV74 962 aa12.41□□□□□ -0.42
SF3B3-208ENST00000567250 TSSK4Q6SA08 328 aa12.41□□□□□ -0.42
SF3B3-208ENST00000567250 MFSD7Q6UXD7 560 aa12.41□□□□□ -0.42
SF3B3-208ENST00000567250 LINGO4Q6UY18 593 aa12.41□□□□□ -0.42
SF3B3-208ENST00000567250 SPOCD1Q6ZMY3 1216 aa12.41□□□□□ -0.42
SF3B3-208ENST00000567250 C11orf74Q86VG3 221 aa12.41□□□□□ -0.42
SF3B3-208ENST00000567250 WDR5BQ86VZ2 330 aa12.41□□□□□ -0.42
SF3B3-208ENST00000567250 ARHGAP12Q8IWW6 846 aa12.41□□□□□ -0.42
SF3B3-208ENST00000567250 MAML2Q8IZL2 1156 aaPredicted RBP12.41□□□□□ -0.42
SF3B3-208ENST00000567250 BBS5Q8N3I7 341 aa12.41□□□□□ -0.42
SF3B3-208ENST00000567250 ZNF366Q8N895 744 aa12.41□□□□□ -0.42
SF3B3-208ENST00000567250 PRSS33Q8NF86 280 aa12.41□□□□□ -0.42
SF3B3-208ENST00000567250 OR8D1Q8WZ84 308 aa12.41□□□□□ -0.42
SF3B3-208ENST00000567250 PRCCQ92733 491 aaPredicted RBP12.41□□□□□ -0.42
SF3B3-208ENST00000567250 KRT35Q92764 455 aa12.41□□□□□ -0.42
SF3B3-208ENST00000567250 ISG20Q96AZ6 181 aaKnown RBP12.41□□□□□ -0.42
SF3B3-208ENST00000567250 ZNF599Q96NL3 588 aa12.41□□□□□ -0.42
SF3B3-208ENST00000567250 KLC2Q9H0B6 622 aa12.41□□□□□ -0.42
SF3B3-208ENST00000567250 PRSS16Q9NQE7 514 aa12.41□□□□□ -0.42
SF3B3-208ENST00000567250 ETNK2Q9NVF9 386 aa12.41□□□□□ -0.42
SF3B3-208ENST00000567250 C2orf42Q9NWW7 574 aa12.41□□□□□ -0.42
SF3B3-208ENST00000567250 IPO11Q9UI26 975 aaKnown RBP12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms