RNA–Protein interactions for RNA: ENST00000567111.1

E4F1-208, Transcript of E4F transcription factor 1, humanhuman

TSL 2

Gene E4F1, Length 691 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
E4F1-208ENST00000567111 CCDC114Q96M63 670 aa23.1■■□□□ 1.29
E4F1-208ENST00000567111 FBRSQ9HAH7 460 aa23.1■■□□□ 1.29
E4F1-208ENST00000567111 SP110Q9HB58 689 aa23.1■■□□□ 1.29
E4F1-208ENST00000567111 IPO11Q9UI26 975 aaKnown RBP23.1■■□□□ 1.29
E4F1-208ENST00000567111 FBXO4Q9UKT5 387 aa23.1■■□□□ 1.29
E4F1-208ENST00000567111 PACSIN2Q9UNF0 486 aaPredicted RBP23.1■■□□□ 1.29
E4F1-208ENST00000567111 FARP1Q9Y4F1 1045 aaPredicted RBP23.1■■□□□ 1.29
E4F1-208ENST00000567111 TTC34A8MYJ7 566 aa23.09■■□□□ 1.29
E4F1-208ENST00000567111 DDX3YO15523 660 aaKnown RBP23.09■■□□□ 1.29
E4F1-208ENST00000567111 GALR2O43603 387 aaPredicted RBP23.09■■□□□ 1.29
E4F1-208ENST00000567111 CST8O60676 142 aa23.09■■□□□ 1.29
E4F1-208ENST00000567111 PRAMEF11O60813 436 aa23.09■■□□□ 1.29
E4F1-208ENST00000567111 APBB3O95704 486 aa23.09■■□□□ 1.29
E4F1-208ENST00000567111 SRCP12931 536 aa23.09■■□□□ 1.29
E4F1-208ENST00000567111 KRT10P13645 584 aa23.09■■□□□ 1.29
E4F1-208ENST00000567111 HLA-EP13747 358 aa23.09■■□□□ 1.29
E4F1-208ENST00000567111 PRKCHP24723 683 aa23.09■■□□□ 1.29
E4F1-208ENST00000567111 NR2C2P49116 596 aa23.09■■□□□ 1.29
E4F1-208ENST00000567111 NRLP54845 237 aa23.09■■□□□ 1.29
E4F1-208ENST00000567111 ARF5P84085 180 aa23.09■■□□□ 1.29
E4F1-208ENST00000567111 IL10RBQ08334 325 aa23.09■■□□□ 1.29
E4F1-208ENST00000567111 ZNF569Q5MCW4 686 aa23.09■■□□□ 1.29
E4F1-208ENST00000567111 CCDC181Q5TID7 509 aa23.09■■□□□ 1.29
E4F1-208ENST00000567111 KAZNQ674X7 775 aa23.09■■□□□ 1.29
E4F1-208ENST00000567111 ATPAF2Q8N5M1 289 aa23.09■■□□□ 1.29
E4F1-208ENST00000567111 PLD5Q8N7P1 536 aa23.09■■□□□ 1.29
E4F1-208ENST00000567111 ALG3Q92685 438 aa23.09■■□□□ 1.29
E4F1-208ENST00000567111 OSBPL8Q9BZF1 889 aa23.09■■□□□ 1.29
E4F1-208ENST00000567111 CEP44Q9C0F1 390 aa23.09■■□□□ 1.29
E4F1-208ENST00000567111 UBA2Q9UBT2 640 aaPredicted RBP23.09■■□□□ 1.29
E4F1-208ENST00000567111 JRKLQ9Y4A0 524 aa23.09■■□□□ 1.29
E4F1-208ENST00000567111 MFHAS1Q9Y4C4 1052 aa23.09■■□□□ 1.29
E4F1-208ENST00000567111 HEY1Q9Y5J3 304 aa23.09■■□□□ 1.29
E4F1-208ENST00000567111 CHD5Q8TDI0 1954 aa23.09■■□□□ 1.29
E4F1-208ENST00000567111 hCG_1818297A0A087WSY0 165 aa23.08■■□□□ 1.29
E4F1-208ENST00000567111 MT-CO1P00395 513 aa23.08■■□□□ 1.29
E4F1-208ENST00000567111 PYGMP11217 842 aa23.08■■□□□ 1.29
E4F1-208ENST00000567111 HOXA6P31267 233 aa23.08■■□□□ 1.29
E4F1-208ENST00000567111 PTPN7P35236 360 aa23.08■■□□□ 1.29
E4F1-208ENST00000567111 RECQLP46063 649 aaPredicted RBP23.08■■□□□ 1.29
E4F1-208ENST00000567111 SERPINH1P50454 418 aaKnown RBP23.08■■□□□ 1.29
E4F1-208ENST00000567111 DNA2P51530 1060 aa23.08■■□□□ 1.29
E4F1-208ENST00000567111 CSTF1Q05048 431 aaKnown RBP23.08■■□□□ 1.29
E4F1-208ENST00000567111 CAMK2GQ13555 558 aaPredicted RBP23.08■■□□□ 1.29
E4F1-208ENST00000567111 HS1BP3Q53T59 392 aa23.08■■□□□ 1.29
E4F1-208ENST00000567111 TMCO4Q5TGY1 634 aa23.08■■□□□ 1.29
E4F1-208ENST00000567111 TMEM92Q6UXU6 159 aa23.08■■□□□ 1.29
E4F1-208ENST00000567111 ISG20Q96AZ6 181 aaKnown RBP23.08■■□□□ 1.29
E4F1-208ENST00000567111 MYO19Q96H55 970 aa23.08■■□□□ 1.29
E4F1-208ENST00000567111 ZNF599Q96NL3 588 aa23.08■■□□□ 1.29
E4F1-208ENST00000567111 A0A1W2PQF6 199 aa23.07■■□□□ 1.28
E4F1-208ENST00000567111 RNASEH1O60930 286 aaKnown RBP23.07■■□□□ 1.28
E4F1-208ENST00000567111 TJP3O95049 919 aa23.07■■□□□ 1.28
E4F1-208ENST00000567111 TGM2P21980 687 aa23.07■■□□□ 1.28
E4F1-208ENST00000567111 DYNLT1P63172 113 aa23.07■■□□□ 1.28
E4F1-208ENST00000567111 GALNT2Q10471 571 aa23.07■■□□□ 1.28
E4F1-208ENST00000567111 RFTN1Q14699 578 aaPredicted RBP23.07■■□□□ 1.28
E4F1-208ENST00000567111 PDK1Q15118 436 aa23.07■■□□□ 1.28
E4F1-208ENST00000567111 PGBD3Q8N328 593 aa23.07■■□□□ 1.28
E4F1-208ENST00000567111 PCDH20Q8N6Y1 951 aaKnown RBP23.07■■□□□ 1.28
E4F1-208ENST00000567111 P3H4Q92791 437 aa23.07■■□□□ 1.28
E4F1-208ENST00000567111 HEMGNQ9BXL5 484 aa23.07■■□□□ 1.28
E4F1-208ENST00000567111 FAM126AQ9BYI3 521 aaPredicted RBP23.07■■□□□ 1.28
E4F1-208ENST00000567111 BRD8Q9H0E9 1235 aa23.07■■□□□ 1.28
E4F1-208ENST00000567111 PRMT8Q9NR22 394 aaPredicted RBP23.07■■□□□ 1.28
E4F1-208ENST00000567111 KCND1Q9NSA2 647 aa23.07■■□□□ 1.28
E4F1-208ENST00000567111 TCRBV21S2A2A0A5A6 115 aa23.06■■□□□ 1.28
E4F1-208ENST00000567111 J3KR12 359 aa23.06■■□□□ 1.28
E4F1-208ENST00000567111 MFSD11O43934 449 aa23.06■■□□□ 1.28
E4F1-208ENST00000567111 CCNCP24863 283 aa23.06■■□□□ 1.28
E4F1-208ENST00000567111 GBE1Q04446 702 aa23.06■■□□□ 1.28
E4F1-208ENST00000567111 LLGL1Q15334 1064 aa23.06■■□□□ 1.28
E4F1-208ENST00000567111 SEL1L2Q5TEA6 688 aa23.06■■□□□ 1.28
E4F1-208ENST00000567111 TIGD7Q6NT04 549 aaPredicted RBP23.06■■□□□ 1.28
E4F1-208ENST00000567111 BBS12Q6ZW61 710 aa23.06■■□□□ 1.28
E4F1-208ENST00000567111 DSG4Q86SJ6 1040 aa23.06■■□□□ 1.28
E4F1-208ENST00000567111 BBS5Q8N3I7 341 aa23.06■■□□□ 1.28
E4F1-208ENST00000567111 ZNF366Q8N895 744 aa23.06■■□□□ 1.28
E4F1-208ENST00000567111 NETO2Q8NC67 525 aa23.06■■□□□ 1.28
E4F1-208ENST00000567111 CCNYQ8ND76 341 aa23.06■■□□□ 1.28
E4F1-208ENST00000567111 FRS2Q8WU20 508 aa23.06■■□□□ 1.28
E4F1-208ENST00000567111 TSGA13Q96PP4 275 aa23.06■■□□□ 1.28
E4F1-208ENST00000567111 PRSS16Q9NQE7 514 aa23.06■■□□□ 1.28
E4F1-208ENST00000567111 POLR3BQ9NW08 1133 aaPredicted RBP23.06■■□□□ 1.28
E4F1-208ENST00000567111 C2orf42Q9NWW7 574 aa23.06■■□□□ 1.28
E4F1-208ENST00000567111 DTLQ9NZJ0 730 aa23.06■■□□□ 1.28
E4F1-208ENST00000567111 BCCIPQ9P287 314 aaKnown RBP eCLIP23.06■■□□□ 1.28
E4F1-208ENST00000567111 CACNA1IQ9P0X4 2223 aa23.05■■□□□ 1.28
E4F1-208ENST00000567111 K7ERQ8 282 aa23.05■■□□□ 1.28
E4F1-208ENST00000567111 PPP1R12AO14974 1030 aaPredicted RBP23.05■■□□□ 1.28
E4F1-208ENST00000567111 SMAD6O43541 496 aaKnown RBP23.05■■□□□ 1.28
E4F1-208ENST00000567111 GARSP41250 739 aaKnown RBP23.05■■□□□ 1.28
E4F1-208ENST00000567111 ZNF211Q13398 564 aaPredicted RBP23.05■■□□□ 1.28
E4F1-208ENST00000567111 ANGPT1Q15389 498 aa23.05■■□□□ 1.28
E4F1-208ENST00000567111 ZNF528Q3MIS6 628 aa23.05■■□□□ 1.28
E4F1-208ENST00000567111 C9orf64Q5T6V5 341 aa23.05■■□□□ 1.28
E4F1-208ENST00000567111 KIAA1211LQ6NV74 962 aa23.05■■□□□ 1.28
E4F1-208ENST00000567111 LEKR1Q6ZMV7 388 aa23.05■■□□□ 1.28
E4F1-208ENST00000567111 TP53INP2Q8IXH6 220 aa23.05■■□□□ 1.28
E4F1-208ENST00000567111 PLPP6Q8IY26 295 aa23.05■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms