RNA–Protein interactions for RNA: ENST00000566811.5

RNF40-210, Transcript of ring finger protein 40, humanhuman

TSL 2

Gene RNF40, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-210ENST00000566811 PLXND1Q9Y4D7 1925 aa20.73■□□□□ 0.91
RNF40-210ENST00000566811 APOL1O14791 398 aa20.73■□□□□ 0.91
RNF40-210ENST00000566811 ADAM23O75077 832 aa20.73■□□□□ 0.91
RNF40-210ENST00000566811 ZMPSTE24O75844 475 aa20.73■□□□□ 0.91
RNF40-210ENST00000566811 FTCDO95954 541 aa20.73■□□□□ 0.91
RNF40-210ENST00000566811 PEX5P50542 639 aa20.73■□□□□ 0.91
RNF40-210ENST00000566811 ZNF33AQ06730 810 aa20.73■□□□□ 0.91
RNF40-210ENST00000566811 RFTN1Q14699 578 aaPredicted RBP20.73■□□□□ 0.91
RNF40-210ENST00000566811 HNRNPA1L2Q32P51 320 aaKnown RBP20.73■□□□□ 0.91
RNF40-210ENST00000566811 INO80DQ53TQ3 878 aaPredicted RBP20.73■□□□□ 0.91
RNF40-210ENST00000566811 NCBP2-AS2Q69YL0 99 aa20.73■□□□□ 0.91
RNF40-210ENST00000566811 ARHGAP12Q8IWW6 846 aa20.73■□□□□ 0.91
RNF40-210ENST00000566811 NPWQ8N729 165 aa20.73■□□□□ 0.91
RNF40-210ENST00000566811 SORCS1Q8WY21 1168 aa20.73■□□□□ 0.91
RNF40-210ENST00000566811 KRT35Q92764 455 aa20.73■□□□□ 0.91
RNF40-210ENST00000566811 ISG20Q96AZ6 181 aaKnown RBP20.73■□□□□ 0.91
RNF40-210ENST00000566811 HMCESQ96FZ2 354 aa20.73■□□□□ 0.91
RNF40-210ENST00000566811 HAUS2Q9NVX0 235 aa20.73■□□□□ 0.91
RNF40-210ENST00000566811 SHROOM3Q8TF72 1996 aa20.73■□□□□ 0.91
RNF40-210ENST00000566811 KIF5CO60282 957 aa20.72■□□□□ 0.91
RNF40-210ENST00000566811 APBB3O95704 486 aa20.72■□□□□ 0.91
RNF40-210ENST00000566811 EPHX1P07099 455 aa20.72■□□□□ 0.91
RNF40-210ENST00000566811 C7P10643 843 aa20.72■□□□□ 0.91
RNF40-210ENST00000566811 TGM2P21980 687 aa20.72■□□□□ 0.91
RNF40-210ENST00000566811 ACVRL1P37023 503 aa20.72■□□□□ 0.91
RNF40-210ENST00000566811 NR2C2P49116 596 aa20.72■□□□□ 0.91
RNF40-210ENST00000566811 ARF5P84085 180 aa20.72■□□□□ 0.91
RNF40-210ENST00000566811 IL10RBQ08334 325 aa20.72■□□□□ 0.91
RNF40-210ENST00000566811 MMRN1Q13201 1228 aa20.72■□□□□ 0.91
RNF40-210ENST00000566811 CAMK2GQ13555 558 aaPredicted RBP20.72■□□□□ 0.91
RNF40-210ENST00000566811 PKN3Q6P5Z2 889 aa20.72■□□□□ 0.91
RNF40-210ENST00000566811 MFSD7Q6UXD7 560 aa20.72■□□□□ 0.91
RNF40-210ENST00000566811 ATPAF2Q8N5M1 289 aa20.72■□□□□ 0.91
RNF40-210ENST00000566811 CCDC33Q8N5R6 958 aa20.72■□□□□ 0.91
RNF40-210ENST00000566811 PCDH20Q8N6Y1 951 aaKnown RBP20.72■□□□□ 0.91
RNF40-210ENST00000566811 ATP11CQ8NB49 1132 aa20.72■□□□□ 0.91
RNF40-210ENST00000566811 TSTD1Q8NFU3 115 aa20.72■□□□□ 0.91
RNF40-210ENST00000566811 FATE1Q969F0 183 aa20.72■□□□□ 0.91
RNF40-210ENST00000566811 RNF25Q96BH1 459 aaPredicted RBP20.72■□□□□ 0.91
RNF40-210ENST00000566811 ZNF599Q96NL3 588 aa20.72■□□□□ 0.91
RNF40-210ENST00000566811 BRD8Q9H0E9 1235 aa20.72■□□□□ 0.91
RNF40-210ENST00000566811 SP110Q9HB58 689 aa20.72■□□□□ 0.91
RNF40-210ENST00000566811 KCND1Q9NSA2 647 aa20.72■□□□□ 0.91
RNF40-210ENST00000566811 hCG_1818297A0A087WSY0 165 aa20.71■□□□□ 0.91
RNF40-210ENST00000566811 A0A1W2PQF6 199 aa20.71■□□□□ 0.91
RNF40-210ENST00000566811 ALOX15BO15296 676 aa20.71■□□□□ 0.91
RNF40-210ENST00000566811 SNAP91O60641 907 aa20.71■□□□□ 0.91
RNF40-210ENST00000566811 PRAMEF11O60813 436 aa20.71■□□□□ 0.91
RNF40-210ENST00000566811 ZNF189O75820 626 aaPredicted RBP20.71■□□□□ 0.91
RNF40-210ENST00000566811 SRCP12931 536 aa20.71■□□□□ 0.91
RNF40-210ENST00000566811 PRKCHP24723 683 aa20.71■□□□□ 0.91
RNF40-210ENST00000566811 CTSOP43234 321 aaPredicted RBP20.71■□□□□ 0.91
RNF40-210ENST00000566811 MARCKSL1P49006 195 aa20.71■□□□□ 0.91
RNF40-210ENST00000566811 SATB1Q01826 763 aa20.71■□□□□ 0.91
RNF40-210ENST00000566811 GALNT2Q10471 571 aa20.71■□□□□ 0.91
RNF40-210ENST00000566811 ELAVL3Q14576 367 aaKnown RBP20.71■□□□□ 0.91
RNF40-210ENST00000566811 HS1BP3Q53T59 392 aa20.71■□□□□ 0.91
RNF40-210ENST00000566811 MEI1Q5TIA1 1274 aa20.71■□□□□ 0.91
RNF40-210ENST00000566811 TIGD7Q6NT04 549 aaPredicted RBP20.71■□□□□ 0.91
RNF40-210ENST00000566811 RFX6Q8HWS3 928 aa20.71■□□□□ 0.91
RNF40-210ENST00000566811 REXO1L1PQ8IX06 675 aa20.71■□□□□ 0.91
RNF40-210ENST00000566811 PLPP6Q8IY26 295 aa20.71■□□□□ 0.91
RNF40-210ENST00000566811 PQLC3Q8N755 202 aa20.71■□□□□ 0.91
RNF40-210ENST00000566811 CELF6Q96J87 481 aaKnown RBP20.71■□□□□ 0.91
RNF40-210ENST00000566811 ACOX2Q99424 681 aa20.71■□□□□ 0.91
RNF40-210ENST00000566811 SLC39A8Q9C0K1 460 aa20.71■□□□□ 0.91
RNF40-210ENST00000566811 ETNK2Q9NVF9 386 aa20.71■□□□□ 0.91
RNF40-210ENST00000566811 EBF1Q9UH73 591 aa20.71■□□□□ 0.91
RNF40-210ENST00000566811 FARP1Q9Y4F1 1045 aaPredicted RBP20.71■□□□□ 0.91
RNF40-210ENST00000566811 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP20.71■□□□□ 0.91
RNF40-210ENST00000566811 MYO15AQ9UKN7 3530 aa20.7■□□□□ 0.9
RNF40-210ENST00000566811 FANCMQ8IYD8 2048 aa20.7■□□□□ 0.9
RNF40-210ENST00000566811 DFFAO00273 331 aa20.7■□□□□ 0.9
RNF40-210ENST00000566811 PPP1R12AO14974 1030 aaPredicted RBP20.7■□□□□ 0.9
RNF40-210ENST00000566811 MFSD11O43934 449 aa20.7■□□□□ 0.9
RNF40-210ENST00000566811 NBL1P41271 181 aa20.7■□□□□ 0.9
RNF40-210ENST00000566811 STK19P49842 368 aaPredicted RBP20.7■□□□□ 0.9
RNF40-210ENST00000566811 PAPOLAP51003 745 aaKnown RBP20.7■□□□□ 0.9
RNF40-210ENST00000566811 ZBTB16Q05516 673 aa20.7■□□□□ 0.9
RNF40-210ENST00000566811 RPS6KA1Q15418 735 aa20.7■□□□□ 0.9
RNF40-210ENST00000566811 C22orf39Q6P5X5 142 aa20.7■□□□□ 0.9
RNF40-210ENST00000566811 DSG4Q86SJ6 1040 aa20.7■□□□□ 0.9
RNF40-210ENST00000566811 BBS5Q8N3I7 341 aa20.7■□□□□ 0.9
RNF40-210ENST00000566811 PLD5Q8N7P1 536 aa20.7■□□□□ 0.9
RNF40-210ENST00000566811 FRS2Q8WU20 508 aa20.7■□□□□ 0.9
RNF40-210ENST00000566811 NSMCE1Q8WV22 266 aa20.7■□□□□ 0.9
RNF40-210ENST00000566811 HDAC11Q96DB2 347 aa20.7■□□□□ 0.9
RNF40-210ENST00000566811 RPL10LQ96L21 214 aaKnown RBP20.7■□□□□ 0.9
RNF40-210ENST00000566811 CARD9Q9H257 536 aa20.7■□□□□ 0.9
RNF40-210ENST00000566811 PDFQ9HBH1 243 aa20.7■□□□□ 0.9
RNF40-210ENST00000566811 UBA2Q9UBT2 640 aaPredicted RBP20.7■□□□□ 0.9
RNF40-210ENST00000566811 IPO11Q9UI26 975 aaKnown RBP20.7■□□□□ 0.9
RNF40-210ENST00000566811 JRKLQ9Y4A0 524 aa20.7■□□□□ 0.9
RNF40-210ENST00000566811 PRR23AA6NEV1 266 aa20.69■□□□□ 0.9
RNF40-210ENST00000566811 K7ESF4 209 aa20.69■□□□□ 0.9
RNF40-210ENST00000566811 DDX3YO15523 660 aaKnown RBP20.69■□□□□ 0.9
RNF40-210ENST00000566811 RNASEH1O60930 286 aaKnown RBP20.69■□□□□ 0.9
RNF40-210ENST00000566811 TJP3O95049 919 aa20.69■□□□□ 0.9
RNF40-210ENST00000566811 GARSP41250 739 aaKnown RBP20.69■□□□□ 0.9
RNF40-210ENST00000566811 RECQLP46063 649 aaPredicted RBP20.69■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms