RNA–Protein interactions for RNA: ENST00000566756.5

CMTM3-213, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2

Gene CMTM3, Length 1,950 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-213ENST00000566756 FSTL4Q6MZW2 842 aa17.08■□□□□ 0.32
CMTM3-213ENST00000566756 ATG14Q6ZNE5 492 aa17.08■□□□□ 0.32
CMTM3-213ENST00000566756 OSTM1Q86WC4 334 aa17.08■□□□□ 0.32
CMTM3-213ENST00000566756 KLHDC8BQ8IXV7 354 aa17.08■□□□□ 0.32
CMTM3-213ENST00000566756 GAD1Q99259 594 aa17.08■□□□□ 0.32
CMTM3-213ENST00000566756 TSC22D3Q99576 134 aa17.08■□□□□ 0.32
CMTM3-213ENST00000566756 RTKNQ9BST9 563 aa17.08■□□□□ 0.32
CMTM3-213ENST00000566756 TSPYL2Q9H2G4 693 aaPredicted RBP17.08■□□□□ 0.32
CMTM3-213ENST00000566756 PIGVQ9NUD9 493 aa17.08■□□□□ 0.32
CMTM3-213ENST00000566756 IL1RAPL1Q9NZN1 696 aa17.08■□□□□ 0.32
CMTM3-213ENST00000566756 CDH22Q9UJ99 828 aa17.08■□□□□ 0.32
CMTM3-213ENST00000566756 ARHGAP26Q9UNA1 814 aa17.08■□□□□ 0.32
CMTM3-213ENST00000566756 SSX2IPQ9Y2D8 614 aa17.08■□□□□ 0.32
CMTM3-213ENST00000566756 HTTP42858 3142 aa17.07■□□□□ 0.32
CMTM3-213ENST00000566756 ARL5CA6NH57 179 aa17.07■□□□□ 0.32
CMTM3-213ENST00000566756 MEI4A8MW99 385 aa17.07■□□□□ 0.32
CMTM3-213ENST00000566756 ARVCFO00192 962 aa17.07■□□□□ 0.32
CMTM3-213ENST00000566756 PSMD3O43242 534 aa17.07■□□□□ 0.32
CMTM3-213ENST00000566756 MGEA5O60502 916 aa17.07■□□□□ 0.32
CMTM3-213ENST00000566756 TRIM13O60858 407 aa17.07■□□□□ 0.32
CMTM3-213ENST00000566756 PIM1P11309 404 aaPredicted RBP17.07■□□□□ 0.32
CMTM3-213ENST00000566756 CALRP27797 417 aaKnown RBP17.07■□□□□ 0.32
CMTM3-213ENST00000566756 ADSLP30566 484 aaPredicted RBP17.07■□□□□ 0.32
CMTM3-213ENST00000566756 PITX1P78337 314 aaPredicted RBP17.07■□□□□ 0.32
CMTM3-213ENST00000566756 HTRA3P83110 453 aa17.07■□□□□ 0.32
CMTM3-213ENST00000566756 CLEC20AQ6ZU45 233 aa17.07■□□□□ 0.32
CMTM3-213ENST00000566756 PAQR9Q6ZVX9 377 aa17.07■□□□□ 0.32
CMTM3-213ENST00000566756 ZNF483Q8TF39 744 aaPredicted RBP17.07■□□□□ 0.32
CMTM3-213ENST00000566756 KCNK16Q96T55 309 aa17.07■□□□□ 0.32
CMTM3-213ENST00000566756 TTC1Q99614 292 aa17.07■□□□□ 0.32
CMTM3-213ENST00000566756 IL22Q9GZX6 179 aa17.07■□□□□ 0.32
CMTM3-213ENST00000566756 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.07■□□□□ 0.326e-8■■■■■ 50.5
CMTM3-213ENST00000566756 FBXW11Q9UKB1 542 aa17.07■□□□□ 0.32
CMTM3-213ENST00000566756 TRIM17Q9Y577 477 aa17.07■□□□□ 0.32
CMTM3-213ENST00000566756 A0A096LPK6 155 aa17.06■□□□□ 0.32
CMTM3-213ENST00000566756 EIF4E1BA6NMX2 242 aaKnown RBP17.06■□□□□ 0.32
CMTM3-213ENST00000566756 F5H423 210 aaPredicted RBP17.06■□□□□ 0.32
CMTM3-213ENST00000566756 HSPA4LO95757 839 aa17.06■□□□□ 0.32
CMTM3-213ENST00000566756 ITGAXP20702 1163 aa17.06■□□□□ 0.32
CMTM3-213ENST00000566756 RPL9P32969 192 aaKnown RBP17.06■□□□□ 0.32
CMTM3-213ENST00000566756 TPI1P60174 286 aa17.06■□□□□ 0.32
CMTM3-213ENST00000566756 SYPL2Q5VXT5 272 aa17.06■□□□□ 0.32
CMTM3-213ENST00000566756 TRAF7Q6Q0C0 670 aa17.06■□□□□ 0.32
CMTM3-213ENST00000566756 URGCPQ8TCY9 931 aa17.06■□□□□ 0.32
CMTM3-213ENST00000566756 CNDP1Q96KN2 507 aa17.06■□□□□ 0.32
CMTM3-213ENST00000566756 CEP41Q9BYV8 373 aa17.06■□□□□ 0.32
CMTM3-213ENST00000566756 COG4Q9H9E3 785 aa17.06■□□□□ 0.32
CMTM3-213ENST00000566756 WDR6Q9NNW5 1121 aaKnown RBP17.06■□□□□ 0.32
CMTM3-213ENST00000566756 CNGB3Q9NQW8 809 aa17.06■□□□□ 0.32
CMTM3-213ENST00000566756 PIH1D1Q9NWS0 290 aaKnown RBP17.06■□□□□ 0.32
CMTM3-213ENST00000566756 MYO18AQ92614 2054 aaKnown RBP17.06■□□□□ 0.32
CMTM3-213ENST00000566756 PEX1O43933 1283 aa17.06■□□□□ 0.32
CMTM3-213ENST00000566756 SMIM24O75264 130 aa17.06■□□□□ 0.32
CMTM3-213ENST00000566756 BAG2O95816 211 aa17.06■□□□□ 0.32
CMTM3-213ENST00000566756 F9P00740 461 aa17.06■□□□□ 0.32
CMTM3-213ENST00000566756 LYNP07948 512 aa17.06■□□□□ 0.32
CMTM3-213ENST00000566756 COX4I1P13073 169 aa17.06■□□□□ 0.32
CMTM3-213ENST00000566756 GLDCP23378 1020 aa17.06■□□□□ 0.32
CMTM3-213ENST00000566756 SERPINB6P35237 376 aa17.06■□□□□ 0.32
CMTM3-213ENST00000566756 POLD2P49005 469 aa17.06■□□□□ 0.32
CMTM3-213ENST00000566756 GALNT2Q10471 571 aa17.06■□□□□ 0.32
CMTM3-213ENST00000566756 MPP3Q13368 585 aa17.06■□□□□ 0.32
CMTM3-213ENST00000566756 CCNIQ14094 377 aa17.06■□□□□ 0.32
CMTM3-213ENST00000566756 ARL13BQ3SXY8 428 aa17.06■□□□□ 0.32
CMTM3-213ENST00000566756 CFAP157Q5JU67 520 aa17.06■□□□□ 0.32
CMTM3-213ENST00000566756 ACAD11Q709F0 780 aa17.06■□□□□ 0.32
CMTM3-213ENST00000566756 CMC1Q7Z7K0 106 aa17.06■□□□□ 0.32
CMTM3-213ENST00000566756 PDSS2Q86YH6 399 aa17.06■□□□□ 0.32
CMTM3-213ENST00000566756 FBXW8Q8N3Y1 598 aa17.06■□□□□ 0.32
CMTM3-213ENST00000566756 ZFAND2BQ8WV99 257 aa17.06■□□□□ 0.32
CMTM3-213ENST00000566756 ADAM2Q99965 735 aa17.06■□□□□ 0.32
CMTM3-213ENST00000566756 TRPV6Q9H1D0 765 aa17.06■□□□□ 0.32
CMTM3-213ENST00000566756 NMRAL1Q9HBL8 299 aa17.06■□□□□ 0.32
CMTM3-213ENST00000566756 SLC24A3Q9HC58 644 aa17.06■□□□□ 0.32
CMTM3-213ENST00000566756 MIOSQ9NXC5 875 aa17.06■□□□□ 0.32
CMTM3-213ENST00000566756 PRPF19Q9UMS4 504 aaKnown RBP17.06■□□□□ 0.32
CMTM3-213ENST00000566756 KCNK1O00180 336 aa17.05■□□□□ 0.32
CMTM3-213ENST00000566756 CASQ2O14958 399 aaPredicted RBP17.05■□□□□ 0.32
CMTM3-213ENST00000566756 INPPL1O15357 1258 aa17.05■□□□□ 0.32
CMTM3-213ENST00000566756 FYNP06241 537 aa17.05■□□□□ 0.32
CMTM3-213ENST00000566756 FAM200BP0CF97 657 aa17.05■□□□□ 0.32
CMTM3-213ENST00000566756 TKTL1P51854 596 aa17.05■□□□□ 0.32
CMTM3-213ENST00000566756 MTTPP55157 894 aa17.05■□□□□ 0.32
CMTM3-213ENST00000566756 DAOAP59103 153 aa17.05■□□□□ 0.32
CMTM3-213ENST00000566756 KLF10Q13118 480 aa17.05■□□□□ 0.32
CMTM3-213ENST00000566756 NME3Q13232 169 aa17.05■□□□□ 0.32
CMTM3-213ENST00000566756 FAM43BQ6ZT52 329 aaPredicted RBP17.05■□□□□ 0.32
CMTM3-213ENST00000566756 KCNMB4Q86W47 210 aa17.05■□□□□ 0.32
CMTM3-213ENST00000566756 PLD6Q8N2A8 252 aaKnown RBP17.05■□□□□ 0.32
CMTM3-213ENST00000566756 ARHGAP18Q8N392 663 aa17.05■□□□□ 0.32
CMTM3-213ENST00000566756 POU5F2Q8N7G0 328 aa17.05■□□□□ 0.32
CMTM3-213ENST00000566756 DNAAF3Q8N9W5 541 aa17.05■□□□□ 0.32
CMTM3-213ENST00000566756 NDRG1Q92597 394 aaKnown RBP17.05■□□□□ 0.32
CMTM3-213ENST00000566756 LPPQ93052 612 aa17.05■□□□□ 0.32
CMTM3-213ENST00000566756 TMPRSS4Q9NRS4 437 aa17.05■□□□□ 0.32
CMTM3-213ENST00000566756 OXSMQ9NWU1 459 aa17.05■□□□□ 0.32
CMTM3-213ENST00000566756 POMPQ9Y244 141 aa17.05■□□□□ 0.32
CMTM3-213ENST00000566756 SLCO1B7G3V0H7 640 aa17.04■□□□□ 0.32
CMTM3-213ENST00000566756 BEST1O76090 585 aa17.04■□□□□ 0.32
CMTM3-213ENST00000566756 C2P06681 752 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms