RNA–Protein interactions for RNA: ENST00000566669.1

UBFD1-206, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 2

Gene UBFD1, Length 577 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-206ENST00000566669 NUP62CLQ9H1M0 184 aa28.34■■■□□ 2.13
UBFD1-206ENST00000566669 SCUBE2Q9NQ36 999 aa28.34■■■□□ 2.13
UBFD1-206ENST00000566669 VPS51Q9UID3 782 aa28.34■■■□□ 2.13
UBFD1-206ENST00000566669 FHOD1Q9Y613 1164 aa28.34■■■□□ 2.13
UBFD1-206ENST00000566669 CACNA1GO43497 2377 aa28.33■■■□□ 2.13
UBFD1-206ENST00000566669 CNTN5O94779 1100 aa28.33■■■□□ 2.13
UBFD1-206ENST00000566669 TPM2P07951 284 aa28.33■■■□□ 2.13
UBFD1-206ENST00000566669 PNMA6AP0CW24 399 aaPredicted RBP28.33■■■□□ 2.13
UBFD1-206ENST00000566669 CHRNA3P32297 505 aa28.33■■■□□ 2.13
UBFD1-206ENST00000566669 ETFBP38117 255 aa28.33■■■□□ 2.13
UBFD1-206ENST00000566669 ALFQ53S48 1182 aa28.33■■■□□ 2.13
UBFD1-206ENST00000566669 SFMBT2Q5VUG0 894 aa28.33■■■□□ 2.13
UBFD1-206ENST00000566669 ZSCAN30Q86W11 494 aa28.33■■■□□ 2.13
UBFD1-206ENST00000566669 OR2A12Q8NGT7 310 aa28.33■■■□□ 2.13
UBFD1-206ENST00000566669 CEP44Q9C0F1 390 aa28.33■■■□□ 2.13
UBFD1-206ENST00000566669 PLXNB3Q9ULL4 1909 aa28.33■■■□□ 2.13
UBFD1-206ENST00000566669 TRABD2BA6NFA1 517 aa28.32■■■□□ 2.12
UBFD1-206ENST00000566669 WNT9AO14904 365 aa28.32■■■□□ 2.12
UBFD1-206ENST00000566669 BNIP3LO60238 219 aa28.32■■■□□ 2.12
UBFD1-206ENST00000566669 GGCXP38435 758 aa28.32■■■□□ 2.12
UBFD1-206ENST00000566669 CAMK2BQ13554 666 aa28.32■■■□□ 2.12
UBFD1-206ENST00000566669 TCP11X2Q5H9J9 407 aa28.32■■■□□ 2.12
UBFD1-206ENST00000566669 PRAMEF14Q5SWL7 426 aa28.32■■■□□ 2.12
UBFD1-206ENST00000566669 DHRS13Q6UX07 377 aa28.32■■■□□ 2.12
UBFD1-206ENST00000566669 MDM1Q8TC05 714 aa28.32■■■□□ 2.12
UBFD1-206ENST00000566669 KLHDC7BQ96G42 594 aa28.32■■■□□ 2.12
UBFD1-206ENST00000566669 PSMB7Q99436 277 aa28.32■■■□□ 2.12
UBFD1-206ENST00000566669 HDAC8Q9BY41 377 aa28.32■■■□□ 2.12
UBFD1-206ENST00000566669 PPARGC1AQ9UBK2 798 aaKnown RBP28.32■■■□□ 2.12
UBFD1-206ENST00000566669 ITPR1Q14643 2758 aa28.32■■■□□ 2.12
UBFD1-206ENST00000566669 F8VZ95 297 aa28.31■■■□□ 2.12
UBFD1-206ENST00000566669 KPNA3O00505 521 aaPredicted RBP28.31■■■□□ 2.12
UBFD1-206ENST00000566669 MAT2AP31153 395 aaKnown RBP28.31■■■□□ 2.12
UBFD1-206ENST00000566669 METAP1P53582 386 aa28.31■■■□□ 2.12
UBFD1-206ENST00000566669 KCNMA1Q12791 1236 aa28.31■■■□□ 2.12
UBFD1-206ENST00000566669 ARL13BQ3SXY8 428 aa28.31■■■□□ 2.12
UBFD1-206ENST00000566669 CCDC157Q569K6 752 aa28.31■■■□□ 2.12
UBFD1-206ENST00000566669 PIP5KL1Q5T9C9 394 aa28.31■■■□□ 2.12
UBFD1-206ENST00000566669 BNIPLQ7Z465 357 aa28.31■■■□□ 2.12
UBFD1-206ENST00000566669 EID2Q8N6I1 236 aa28.31■■■□□ 2.12
UBFD1-206ENST00000566669 ZYG11BQ9C0D3 744 aa28.31■■■□□ 2.12
UBFD1-206ENST00000566669 TMEM59LQ9UK28 342 aa28.31■■■□□ 2.12
UBFD1-206ENST00000566669 RALYQ9UKM9 306 aaKnown RBP28.31■■■□□ 2.12
UBFD1-206ENST00000566669 MT-CO1P00395 513 aa28.3■■■□□ 2.12
UBFD1-206ENST00000566669 NUMBP49757 651 aa28.3■■■□□ 2.12
UBFD1-206ENST00000566669 HS1BP3Q53T59 392 aa28.3■■■□□ 2.12
UBFD1-206ENST00000566669 PCDH20Q8N6Y1 951 aaKnown RBP28.3■■■□□ 2.12
UBFD1-206ENST00000566669 TMEM145Q8NBT3 493 aa28.3■■■□□ 2.12
UBFD1-206ENST00000566669 EPS8L1Q8TE68 723 aa28.3■■■□□ 2.12
UBFD1-206ENST00000566669 TSC1Q92574 1164 aa28.3■■■□□ 2.12
UBFD1-206ENST00000566669 NXPE2Q96DL1 559 aa28.3■■■□□ 2.12
UBFD1-206ENST00000566669 IL36AQ9UHA7 158 aa28.3■■■□□ 2.12
UBFD1-206ENST00000566669 APC2O95996 2303 aa28.3■■■□□ 2.12
UBFD1-206ENST00000566669 PLK4O00444 970 aa28.29■■■□□ 2.12
UBFD1-206ENST00000566669 SNAP91O60641 907 aa28.29■■■□□ 2.12
UBFD1-206ENST00000566669 ENDOD1O94919 500 aa28.29■■■□□ 2.12
UBFD1-206ENST00000566669 JUPP14923 745 aa28.29■■■□□ 2.12
UBFD1-206ENST00000566669 TFE3P19532 575 aaPredicted RBP28.29■■■□□ 2.12
UBFD1-206ENST00000566669 AKT2P31751 481 aa28.29■■■□□ 2.12
UBFD1-206ENST00000566669 FLT3P36888 993 aa28.29■■■□□ 2.12
UBFD1-206ENST00000566669 ACADVLP49748 655 aa28.29■■■□□ 2.12
UBFD1-206ENST00000566669 GEMIN4P57678 1058 aaKnown RBP28.29■■■□□ 2.12
UBFD1-206ENST00000566669 TAS2R38P59533 333 aa28.29■■■□□ 2.12
UBFD1-206ENST00000566669 NOMO3P69849 1222 aa28.29■■■□□ 2.12
UBFD1-206ENST00000566669 TAF3Q5VWG9 929 aa28.29■■■□□ 2.12
UBFD1-206ENST00000566669 C22orf39Q6P5X5 142 aa28.29■■■□□ 2.12
UBFD1-206ENST00000566669 ERN2Q76MJ5 926 aaKnown RBP28.29■■■□□ 2.12
UBFD1-206ENST00000566669 TFAP2DQ7Z6R9 452 aa28.29■■■□□ 2.12
UBFD1-206ENST00000566669 NOP9Q86U38 636 aaKnown RBP28.29■■■□□ 2.12
UBFD1-206ENST00000566669 HORMAD1Q86X24 394 aa28.29■■■□□ 2.12
UBFD1-206ENST00000566669 SPATS2Q86XZ4 545 aaKnown RBP28.29■■■□□ 2.12
UBFD1-206ENST00000566669 CACTIN-AS1Q8N1I8 211 aa28.29■■■□□ 2.12
UBFD1-206ENST00000566669 ANLNQ9NQW6 1124 aa28.29■■■□□ 2.12
UBFD1-206ENST00000566669 A0A0D9SEW6 157 aa28.28■■■□□ 2.12
UBFD1-206ENST00000566669 I6L893 689 aaPredicted RBP28.28■■■□□ 2.12
UBFD1-206ENST00000566669 SRGAP2O75044 1071 aa28.28■■■□□ 2.12
UBFD1-206ENST00000566669 CKMT2P17540 419 aa28.28■■■□□ 2.12
UBFD1-206ENST00000566669 NRG1Q02297 640 aaPredicted RBP28.28■■■□□ 2.12
UBFD1-206ENST00000566669 TRIM72Q6ZMU5 477 aa28.28■■■□□ 2.12
UBFD1-206ENST00000566669 DCP2Q8IU60 420 aaKnown RBP28.28■■■□□ 2.12
UBFD1-206ENST00000566669 IFT43Q96FT9 208 aa28.28■■■□□ 2.12
UBFD1-206ENST00000566669 KLHL11Q9NVR0 708 aa28.28■■■□□ 2.12
UBFD1-206ENST00000566669 MPP6Q9NZW5 540 aa28.28■■■□□ 2.12
UBFD1-206ENST00000566669 ATRXP46100 2492 aa28.28■■■□□ 2.12
UBFD1-206ENST00000566669 GOLGA4Q13439 2230 aaKnown RBP28.27■■■□□ 2.12
UBFD1-206ENST00000566669 NBEAQ8NFP9 2946 aa28.27■■■□□ 2.12
UBFD1-206ENST00000566669 A0A1W2PQU0 124 aa28.27■■■□□ 2.12
UBFD1-206ENST00000566669 GOLGA8SH3BPF8 625 aa28.27■■■□□ 2.12
UBFD1-206ENST00000566669 CBX4O00257 560 aa28.27■■■□□ 2.12
UBFD1-206ENST00000566669 CTSLP07711 333 aa28.27■■■□□ 2.12
UBFD1-206ENST00000566669 HNRNPA2B1P22626 353 aaKnown RBP28.27■■■□□ 2.12
UBFD1-206ENST00000566669 RRM1P23921 792 aa28.27■■■□□ 2.12
UBFD1-206ENST00000566669 SERPINH1P50454 418 aaKnown RBP28.27■■■□□ 2.12
UBFD1-206ENST00000566669 CYP4F3Q08477 520 aa28.27■■■□□ 2.12
UBFD1-206ENST00000566669 POM121L1PQ3SYA9 428 aa28.27■■■□□ 2.12
UBFD1-206ENST00000566669 HSP90AA4PQ58FG1 418 aa28.27■■■□□ 2.12
UBFD1-206ENST00000566669 KANSL1Q7Z3B3 1105 aa28.27■■■□□ 2.12
UBFD1-206ENST00000566669 PLPP6Q8IY26 295 aa28.27■■■□□ 2.12
UBFD1-206ENST00000566669 ENOX1Q8TC92 643 aaKnown RBP28.27■■■□□ 2.12
UBFD1-206ENST00000566669 ATP13A1Q9HD20 1204 aa28.27■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms